RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 OTOGQ6ZRI0 2925 aa12.53□□□□□ -0.4
LIMS3-205ENST00000487150 LOC100130705A0A1B0GUX0 176 aa12.52□□□□□ -0.41
LIMS3-205ENST00000487150 ACOD1A6NK06 481 aa12.52□□□□□ -0.41
LIMS3-205ENST00000487150 M0R129 80 aa12.52□□□□□ -0.41
LIMS3-205ENST00000487150 SLC16A6O15403 523 aa12.52□□□□□ -0.41
LIMS3-205ENST00000487150 CLPTM1O96005 669 aa12.52□□□□□ -0.41
LIMS3-205ENST00000487150 ANXA2P07355 339 aaKnown RBP12.52□□□□□ -0.41
LIMS3-205ENST00000487150 ADH4P08319 380 aa12.52□□□□□ -0.41
LIMS3-205ENST00000487150 CD99P14209 185 aa12.52□□□□□ -0.41
LIMS3-205ENST00000487150 PEX2P28328 305 aa12.52□□□□□ -0.41
LIMS3-205ENST00000487150 DCTDP32321 178 aa12.52□□□□□ -0.41
LIMS3-205ENST00000487150 MPV17P39210 176 aa12.52□□□□□ -0.41
LIMS3-205ENST00000487150 CX3CR1P49238 355 aa12.52□□□□□ -0.41
LIMS3-205ENST00000487150 PSMA6P60900 246 aaKnown RBP12.52□□□□□ -0.41
LIMS3-205ENST00000487150 ACTC1P68032 377 aa12.52□□□□□ -0.41
LIMS3-205ENST00000487150 ACTA1P68133 377 aa12.52□□□□□ -0.41
LIMS3-205ENST00000487150 ROM1Q03395 351 aa12.52□□□□□ -0.41
LIMS3-205ENST00000487150 EGR3Q06889 387 aa12.52□□□□□ -0.41
LIMS3-205ENST00000487150 MAD2L1BPQ15013 274 aaPredicted RBP12.52□□□□□ -0.41
LIMS3-205ENST00000487150 OCLNQ16625 522 aa12.52□□□□□ -0.41
LIMS3-205ENST00000487150 ZNF829Q3KNS6 432 aaPredicted RBP12.52□□□□□ -0.41
LIMS3-205ENST00000487150 TTC23Q5W5X9 447 aa12.52□□□□□ -0.41
LIMS3-205ENST00000487150 PGAP1Q75T13 922 aa12.52□□□□□ -0.41
LIMS3-205ENST00000487150 LRP11Q86VZ4 500 aa12.52□□□□□ -0.41
LIMS3-205ENST00000487150 FTMTQ8N4E7 242 aa12.52□□□□□ -0.41
LIMS3-205ENST00000487150 SETD9Q8NE22 299 aa12.52□□□□□ -0.41
LIMS3-205ENST00000487150 CMBLQ96DG6 245 aa12.52□□□□□ -0.41
LIMS3-205ENST00000487150 ZNF582Q96NG8 517 aaPredicted RBP12.52□□□□□ -0.41
LIMS3-205ENST00000487150 SLC29A1Q99808 456 aa12.52□□□□□ -0.41
LIMS3-205ENST00000487150 SLC22A4Q9H015 551 aa12.52□□□□□ -0.41
LIMS3-205ENST00000487150 OR10A2Q9H208 303 aa12.52□□□□□ -0.41
LIMS3-205ENST00000487150 TPK1Q9H3S4 243 aa12.52□□□□□ -0.41
LIMS3-205ENST00000487150 DECR2Q9NUI1 292 aa12.52□□□□□ -0.41
LIMS3-205ENST00000487150 PTTG3PQ9NZH4 202 aa12.52□□□□□ -0.41
LIMS3-205ENST00000487150 MYEF2Q9P2K5 600 aaKnown RBP12.52□□□□□ -0.41
LIMS3-205ENST00000487150 PCDHGB1Q9Y5G3 927 aa12.52□□□□□ -0.41
LIMS3-205ENST00000487150 IQCF6A8MYZ5 107 aa12.51□□□□□ -0.41
LIMS3-205ENST00000487150 E9PQ18 207 aa12.51□□□□□ -0.41
LIMS3-205ENST00000487150 TPD52L2O43399 206 aaKnown RBP12.51□□□□□ -0.41
LIMS3-205ENST00000487150 NDUFS7O75251 213 aa12.51□□□□□ -0.41
LIMS3-205ENST00000487150 MRPL3P09001 348 aaKnown RBP12.51□□□□□ -0.41
LIMS3-205ENST00000487150 SBK2P0C263 348 aa12.51□□□□□ -0.41
LIMS3-205ENST00000487150 OR2T7P0C7T2 308 aa12.51□□□□□ -0.41
LIMS3-205ENST00000487150 NAT2P11245 290 aa12.51□□□□□ -0.41
LIMS3-205ENST00000487150 PSKH1P11801 424 aa12.51□□□□□ -0.41
LIMS3-205ENST00000487150 DAOP14920 347 aa12.51□□□□□ -0.41
LIMS3-205ENST00000487150 DDOSTP39656 456 aa12.51□□□□□ -0.41
LIMS3-205ENST00000487150 MTNR1AP48039 350 aa12.51□□□□□ -0.41
LIMS3-205ENST00000487150 MMP15P51511 669 aa12.51□□□□□ -0.41
LIMS3-205ENST00000487150 PRKXP51817 358 aa12.51□□□□□ -0.41
LIMS3-205ENST00000487150 RIDAP52758 137 aaKnown RBP12.51□□□□□ -0.41
LIMS3-205ENST00000487150 PSG7Q13046 419 aa12.51□□□□□ -0.41
LIMS3-205ENST00000487150 LRRC36Q1X8D7 754 aa12.51□□□□□ -0.41
LIMS3-205ENST00000487150 OGFRL1Q5TC84 451 aaPredicted RBP12.51□□□□□ -0.41
LIMS3-205ENST00000487150 DNM1P46Q6ZS02 220 aa12.51□□□□□ -0.41
LIMS3-205ENST00000487150 SLC35F2Q8IXU6 374 aa12.51□□□□□ -0.41
LIMS3-205ENST00000487150 ZNF679Q8IYX0 411 aa12.51□□□□□ -0.41
LIMS3-205ENST00000487150 ZNF525Q8N782 197 aa12.51□□□□□ -0.41
LIMS3-205ENST00000487150 OR2T27Q8NH04 317 aa12.51□□□□□ -0.41
LIMS3-205ENST00000487150 UBASH3BQ8TF42 649 aa12.51□□□□□ -0.41
LIMS3-205ENST00000487150 RDH5Q92781 318 aa12.51□□□□□ -0.41
LIMS3-205ENST00000487150 HEATR1Q9H583 2144 aaKnown RBP12.51□□□□□ -0.41
LIMS3-205ENST00000487150 MOB1AQ9H8S9 216 aa12.51□□□□□ -0.41
LIMS3-205ENST00000487150 SAP30LQ9HAJ7 183 aa12.51□□□□□ -0.41
LIMS3-205ENST00000487150 RNPEPL1Q9HAU8 725 aa12.51□□□□□ -0.41
LIMS3-205ENST00000487150 ADGRL4Q9HBW9 690 aa12.51□□□□□ -0.41
LIMS3-205ENST00000487150 DLL4Q9NR61 685 aa12.51□□□□□ -0.41
LIMS3-205ENST00000487150 FAM118AQ9NWS6 357 aa12.51□□□□□ -0.41
LIMS3-205ENST00000487150 DNAJC27Q9NZQ0 273 aa12.51□□□□□ -0.41
LIMS3-205ENST00000487150 USF3Q68DE3 2245 aa12.51□□□□□ -0.41
LIMS3-205ENST00000487150 PRRC2AP48634 2157 aaKnown RBP12.5□□□□□ -0.41
LIMS3-205ENST00000487150 CD55P08174 381 aa12.5□□□□□ -0.41
LIMS3-205ENST00000487150 SLC34A1Q06495 639 aa12.5□□□□□ -0.41
LIMS3-205ENST00000487150 SLC3A1Q07837 685 aa12.5□□□□□ -0.41
LIMS3-205ENST00000487150 IL18R1Q13478 541 aa12.5□□□□□ -0.41
LIMS3-205ENST00000487150 TIGD6Q17RP2 521 aa12.5□□□□□ -0.41
LIMS3-205ENST00000487150 RSPO1Q2MKA7 263 aaPredicted RBP12.5□□□□□ -0.41
LIMS3-205ENST00000487150 ZNF322Q6U7Q0 402 aaPredicted RBP12.5□□□□□ -0.41
LIMS3-205ENST00000487150 SPATC1Q76KD6 591 aa12.5□□□□□ -0.41
LIMS3-205ENST00000487150 ZNF786Q8N393 782 aa12.5□□□□□ -0.41
LIMS3-205ENST00000487150 GALNT4Q8N4A0 578 aa12.5□□□□□ -0.41
LIMS3-205ENST00000487150 OR51G2Q8NGK0 314 aa12.5□□□□□ -0.41
LIMS3-205ENST00000487150 OR13G1Q8NGZ3 307 aa12.5□□□□□ -0.41
LIMS3-205ENST00000487150 SPRYD4Q8WW59 207 aaPredicted RBP12.5□□□□□ -0.41
LIMS3-205ENST00000487150 ELMOD3Q96FG2 381 aa12.5□□□□□ -0.41
LIMS3-205ENST00000487150 C18orf12Q96KH6 178 aa12.5□□□□□ -0.41
LIMS3-205ENST00000487150 COX4I2Q96KJ9 171 aa12.5□□□□□ -0.41
LIMS3-205ENST00000487150 TMUB1Q9BVT8 246 aa12.5□□□□□ -0.41
LIMS3-205ENST00000487150 CHODLQ9H9P2 273 aa12.5□□□□□ -0.41
LIMS3-205ENST00000487150 IKZF2Q9UKS7 526 aa12.5□□□□□ -0.41
LIMS3-205ENST00000487150 ARID1AO14497 2285 aa12.5□□□□□ -0.41
LIMS3-205ENST00000487150 IFNL4K9M1U5 179 aa12.49□□□□□ -0.41
LIMS3-205ENST00000487150 TBX1O43435 398 aa12.49□□□□□ -0.41
LIMS3-205ENST00000487150 KRT8P05787 483 aa12.49□□□□□ -0.41
LIMS3-205ENST00000487150 TNFRSF1AP19438 455 aa12.49□□□□□ -0.41
LIMS3-205ENST00000487150 ACHEP22303 614 aa12.49□□□□□ -0.41
LIMS3-205ENST00000487150 ZNF121P58317 390 aaPredicted RBP12.49□□□□□ -0.41
LIMS3-205ENST00000487150 CXCR4P61073 352 aa12.49□□□□□ -0.41
LIMS3-205ENST00000487150 MZT1Q08AG7 82 aa12.49□□□□□ -0.41
LIMS3-205ENST00000487150 GK2Q14410 553 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms