RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 RNF128Q8TEB7 428 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 YIPF5Q969M3 257 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 POFUT1Q9H488 388 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 NIPAL2Q9H841 368 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 LSM5Q9Y4Y9 91 aaKnown RBP11.84□□□□□ -0.51
HMGN1-216ENST00000486741 PCDHGA5Q9Y5G8 931 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 PLXNA4Q9HCM2 1894 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 ZNF254O75437 659 aa11.83□□□□□ -0.51
HMGN1-216ENST00000486741 ABHD16AO95870 558 aa11.83□□□□□ -0.51
HMGN1-216ENST00000486741 C1QBP02746 253 aa11.83□□□□□ -0.51
HMGN1-216ENST00000486741 BGLAPP02818 100 aa11.83□□□□□ -0.51
HMGN1-216ENST00000486741 C3P1Q6ZMU1 363 aa11.83□□□□□ -0.51
HMGN1-216ENST00000486741 CCDC36Q8IYA8 594 aa11.83□□□□□ -0.51
HMGN1-216ENST00000486741 GABRG1Q8N1C3 465 aa11.83□□□□□ -0.51
HMGN1-216ENST00000486741 PCDHB16Q9NRJ7 776 aa11.83□□□□□ -0.51
HMGN1-216ENST00000486741 TAS2R5Q9NYW4 299 aa11.83□□□□□ -0.51
HMGN1-216ENST00000486741 OR4C45A6NMZ5 311 aa11.83□□□□□ -0.52
HMGN1-216ENST00000486741 DHHO43323 396 aa11.83□□□□□ -0.52
HMGN1-216ENST00000486741 CCL3P10147 92 aa11.83□□□□□ -0.52
HMGN1-216ENST00000486741 INSM1Q01101 510 aaPredicted RBP11.83□□□□□ -0.52
HMGN1-216ENST00000486741 MEF2DQ14814 521 aa11.83□□□□□ -0.52
HMGN1-216ENST00000486741 IL1F10Q8WWZ1 152 aa11.83□□□□□ -0.52
HMGN1-216ENST00000486741 SPTAN1Q13813 2472 aaKnown RBP11.83□□□□□ -0.52
HMGN1-216ENST00000486741 PYCARD-AS1I3L0S3 204 aa11.83□□□□□ -0.52
HMGN1-216ENST00000486741 SLC17A2O00624 439 aa11.83□□□□□ -0.52
HMGN1-216ENST00000486741 KLF4O43474 513 aa11.83□□□□□ -0.52
HMGN1-216ENST00000486741 ADRB1P08588 477 aa11.83□□□□□ -0.52
HMGN1-216ENST00000486741 GAAP10253 952 aa11.83□□□□□ -0.52
HMGN1-216ENST00000486741 RGS19P49795 217 aa11.83□□□□□ -0.52
HMGN1-216ENST00000486741 RAP2BP61225 183 aa11.83□□□□□ -0.52
HMGN1-216ENST00000486741 IL11RAQ14626 422 aa11.83□□□□□ -0.52
HMGN1-216ENST00000486741 OPCMLQ14982 345 aa11.83□□□□□ -0.52
HMGN1-216ENST00000486741 CPT1CQ8TCG5 803 aa11.83□□□□□ -0.52
HMGN1-216ENST00000486741 ADIPOR1Q96A54 375 aa11.83□□□□□ -0.52
HMGN1-216ENST00000486741 CMSS1Q9BQ75 279 aaKnown RBP11.83□□□□□ -0.52
HMGN1-216ENST00000486741 TINAGL1Q9GZM7 467 aaPredicted RBP11.83□□□□□ -0.52
HMGN1-216ENST00000486741 PPP1R3EQ9H7J1 279 aa11.83□□□□□ -0.52
HMGN1-216ENST00000486741 SH3BGRL2Q9UJC5 107 aa11.83□□□□□ -0.52
HMGN1-216ENST00000486741 RANBP2P49792 3224 aaKnown RBP11.83□□□□□ -0.52
HMGN1-216ENST00000486741 TP53BP1Q12888 1972 aaPredicted RBP11.83□□□□□ -0.52
HMGN1-216ENST00000486741 B8ZZF3 427 aa11.83□□□□□ -0.52
HMGN1-216ENST00000486741 ANGPTL7O43827 346 aa11.83□□□□□ -0.52
HMGN1-216ENST00000486741 VAMP2P63027 116 aa11.83□□□□□ -0.52
HMGN1-216ENST00000486741 BAMBIQ13145 260 aa11.83□□□□□ -0.52
HMGN1-216ENST00000486741 CD276Q5ZPR3 534 aa11.83□□□□□ -0.52
HMGN1-216ENST00000486741 FAM122CQ6P4D5 195 aa11.83□□□□□ -0.52
HMGN1-216ENST00000486741 PRSS42Q7Z5A4 293 aa11.83□□□□□ -0.52
HMGN1-216ENST00000486741 SPAG16Q8N0X2 631 aa11.83□□□□□ -0.52
HMGN1-216ENST00000486741 NKAIN3Q8N8D7 197 aa11.83□□□□□ -0.52
HMGN1-216ENST00000486741 OR56B1Q8NGI3 324 aa11.83□□□□□ -0.52
HMGN1-216ENST00000486741 UCN2Q96RP3 112 aa11.83□□□□□ -0.52
HMGN1-216ENST00000486741 GLTPQ9NZD2 209 aa11.83□□□□□ -0.52
HMGN1-216ENST00000486741 ASAH2BP0C7U1 165 aa11.82□□□□□ -0.52
HMGN1-216ENST00000486741 MCHR2Q969V1 340 aa11.82□□□□□ -0.52
HMGN1-216ENST00000486741 ST6GAL2Q96JF0 529 aa11.82□□□□□ -0.52
HMGN1-216ENST00000486741 RADILQ96JH8 1075 aa11.82□□□□□ -0.52
HMGN1-216ENST00000486741 SMIM3Q9BZL3 60 aa11.82□□□□□ -0.52
HMGN1-216ENST00000486741 CRLF2Q9HC73 371 aa11.82□□□□□ -0.52
HMGN1-216ENST00000486741 KCNS2Q9ULS6 477 aa11.82□□□□□ -0.52
HMGN1-216ENST00000486741 FOXJ3Q9UPW0 622 aa11.82□□□□□ -0.52
HMGN1-216ENST00000486741 LOC102725191A0A1B0GVB3 256 aa11.82□□□□□ -0.52
HMGN1-216ENST00000486741 OR2M5A3KFT3 312 aa11.82□□□□□ -0.52
HMGN1-216ENST00000486741 CBR3O75828 277 aa11.82□□□□□ -0.52
HMGN1-216ENST00000486741 LPLP06858 475 aa11.82□□□□□ -0.52
HMGN1-216ENST00000486741 CD46P15529 392 aa11.82□□□□□ -0.52
HMGN1-216ENST00000486741 NFYAP23511 347 aaPredicted RBP11.82□□□□□ -0.52
HMGN1-216ENST00000486741 OPRM1P35372 400 aa11.82□□□□□ -0.52
HMGN1-216ENST00000486741 STARD6P59095 220 aa11.82□□□□□ -0.52
HMGN1-216ENST00000486741 EGR4Q05215 589 aa11.82□□□□□ -0.52
HMGN1-216ENST00000486741 ACSM1Q08AH1 577 aa11.82□□□□□ -0.52
HMGN1-216ENST00000486741 PDCD1Q15116 288 aa11.82□□□□□ -0.52
HMGN1-216ENST00000486741 TAF9Q16594 264 aa11.82□□□□□ -0.52
HMGN1-216ENST00000486741 CDC20BQ86Y33 519 aa11.82□□□□□ -0.52
HMGN1-216ENST00000486741 NOXO1Q8NFA2 376 aa11.82□□□□□ -0.52
HMGN1-216ENST00000486741 OR2AE1Q8NHA4 323 aa11.82□□□□□ -0.52
HMGN1-216ENST00000486741 KISS1RQ969F8 398 aaPredicted RBP11.82□□□□□ -0.52
HMGN1-216ENST00000486741 HDGFL3Q9Y3E1 203 aa11.82□□□□□ -0.52
HMGN1-216ENST00000486741 TSPAN2O60636 221 aa11.82□□□□□ -0.52
HMGN1-216ENST00000486741 ALX3O95076 343 aa11.82□□□□□ -0.52
HMGN1-216ENST00000486741 IGHEP01854 428 aa11.82□□□□□ -0.52
HMGN1-216ENST00000486741 CD63P08962 238 aa11.82□□□□□ -0.52
HMGN1-216ENST00000486741 NAGAP17050 411 aa11.82□□□□□ -0.52
HMGN1-216ENST00000486741 GALP22466 123 aa11.82□□□□□ -0.52
HMGN1-216ENST00000486741 APLNRP35414 380 aa11.82□□□□□ -0.52
HMGN1-216ENST00000486741 SUMO3P55854 103 aaPredicted RBP11.82□□□□□ -0.52
HMGN1-216ENST00000486741 ST3GAL2Q16842 350 aa11.82□□□□□ -0.52
HMGN1-216ENST00000486741 OR52N4Q8NGI2 321 aa11.82□□□□□ -0.52
HMGN1-216ENST00000486741 NUBPLQ8TB37 319 aa11.82□□□□□ -0.52
HMGN1-216ENST00000486741 ZCCHC4Q9H5U6 513 aa11.82□□□□□ -0.52
HMGN1-216ENST00000486741 UBE2J1Q9Y385 318 aaPredicted RBP11.82□□□□□ -0.52
HMGN1-216ENST00000486741 PLXND1Q9Y4D7 1925 aa11.81□□□□□ -0.52
HMGN1-216ENST00000486741 BDP1A6H8Y1 2624 aa11.81□□□□□ -0.52
HMGN1-216ENST00000486741 OR5H15A6NDH6 313 aa11.81□□□□□ -0.52
HMGN1-216ENST00000486741 XRCC3O43542 346 aa11.81□□□□□ -0.52
HMGN1-216ENST00000486741 ZNF44P15621 663 aa11.81□□□□□ -0.52
HMGN1-216ENST00000486741 THBS2P35442 1172 aa11.81□□□□□ -0.52
HMGN1-216ENST00000486741 PMS2CLQ68D20 193 aa11.81□□□□□ -0.52
HMGN1-216ENST00000486741 SPINK14Q6IE38 97 aa11.81□□□□□ -0.52
HMGN1-216ENST00000486741 PGLYRP3Q96LB9 341 aa11.81□□□□□ -0.52
HMGN1-216ENST00000486741 SGCZQ96LD1 299 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms