RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 ERVK-19Q9WJR5 959 aa8.02□□□□□ -1.13
COL12A1-208ENST00000486533 ADAM18Q9Y3Q7 739 aa8.02□□□□□ -1.13
COL12A1-208ENST00000486533 EML6Q6ZMW3 1958 aa8.02□□□□□ -1.13
COL12A1-208ENST00000486533 TRBV5-7A0A0A0MS05 114 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 A0A1B0GVC2 190 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 A0A1W2PPK0 400 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 A6NIN4 97 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 ACOD1A6NK06 481 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 E9PLN8 166 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 H7C417 338 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 I3L521 148 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 GNB5O14775 395 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 ZFPL1O95159 310 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 OR6A2O95222 327 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 COX6B1P14854 86 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 PGCP20142 388 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 AGAP20933 346 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 CXCR1P25024 350 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 IL12BP29460 328 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 AGTR1P30556 359 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 PTH2RP49190 550 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 VEGFCP49767 419 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 PPIAP62937 165 aaKnown RBP8.01□□□□□ -1.13
COL12A1-208ENST00000486533 PLAURQ03405 335 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 FGL1Q08830 312 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 OPCMLQ14982 345 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 ZMYND11Q15326 602 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 RAB11BQ15907 218 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 LINC01590Q5TEZ4 76 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 LIPNQ5VXI9 398 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 SLC18B1Q6NT16 456 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 FAM122BQ7Z309 247 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 DTX3Q8N9I9 347 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 OR2M7Q8NG81 312 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 OR51L1Q8NGJ5 315 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 OR6N2Q8NGY6 317 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 OR8K3Q8NH51 312 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 DOK4Q8TEW6 326 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 ZNF721Q8TF20 911 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 SLC25A38Q96DW6 304 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 OMA1Q96E52 524 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 VKORC1Q9BQB6 163 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 TTTY10Q9BZA0 68 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 DEFB127Q9H1M4 99 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 OR10A4Q9H209 315 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 MTFP1Q9UDX5 166 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 OR5V1Q9UGF6 321 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 GLS2Q9UI32 602 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 COPS3Q9UNS2 423 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 TRAV36DV7A0A075B6V5 113 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 A0A0G2JMM0 328 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 A0A1W2PPB8 328 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 A0A1W2PPL8 197 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 A0A1W2PQD3 144 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 A0A1W2PRS3 328 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 TMEM72A0PK05 275 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 PINLYPA6NC86 204 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 OR6C65A6NJZ3 312 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 KIR3DP1A8MWS1 328 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 HRKO00198 91 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 RPP14O95059 124 aaKnown RBP8.01□□□□□ -1.13
COL12A1-208ENST00000486533 UTS2O95399 124 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 CLDN14O95500 239 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 P04436 131 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 ASAH2BP0C7U1 165 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 OR8G3PP0DMU2 310 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 CT45A8P0DMV1 189 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 CT45A9P0DMV2 189 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 RRASP10301 218 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 PPP3CBP16298 524 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 CXCL3P19876 107 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 NFYAP23511 347 aaPredicted RBP8.01□□□□□ -1.13
COL12A1-208ENST00000486533 CDK2P24941 298 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 PRSS3P35030 304 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 AQP2P41181 271 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 PUDPQ08623 228 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 SKP2Q13309 424 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 MFSD13AQ14CX5 517 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 CDSNQ15517 529 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 LGALSLQ3ZCW2 172 aaPredicted RBP8.01□□□□□ -1.13
COL12A1-208ENST00000486533 CT45A2Q5DJT8 189 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 EEF1A1P5Q5VTE0 462 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 SFRP4Q6FHJ7 346 aaPredicted RBP8.01□□□□□ -1.13
COL12A1-208ENST00000486533 LPCAT3Q6P1A2 487 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 ANKRD16Q6P6B7 361 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 OPN5Q6U736 354 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 DGAT2L6Q6ZPD8 337 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 DNM1P46Q6ZS02 220 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 ADGRG3Q86Y34 549 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 C9orf40Q8IXQ3 194 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 RFLNBQ8N5W9 214 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 OR6N1Q8NGY5 312 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 OR2G2Q8NGZ5 317 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 OR6S1Q8NH40 331 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 FAM57AQ8TBR7 257 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 SLC22A8Q8TCC7 542 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 CA5BP1Q8WTZ4 195 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 SMAP2Q8WU79 429 aaPredicted RBP8.01□□□□□ -1.13
COL12A1-208ENST00000486533 SGCZQ96LD1 299 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 Q96M85 177 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms