RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 PWWP2BQ6NUJ5 590 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 ZAR1Q86SH2 424 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 OR10R2Q8NGX6 335 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 KCNG3Q8TAE7 436 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 C2CD4CQ8TF44 421 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 RAB3CQ96E17 227 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 GPR137Q96N19 417 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 USB1Q9BQ65 265 aaKnown RBP9.94□□□□□ -0.82
HDAC6-228ENST00000486227 METTL9Q9H1A3 318 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 B9D1Q9UPM9 204 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 SPTBN2O15020 2390 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 IGHV3-15A0A0B4J1V0 119 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 TRAV1-2A0A0B4J238 106 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 EPXP11678 715 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 POU3F3P20264 500 aaPredicted RBP9.94□□□□□ -0.82
HDAC6-228ENST00000486227 S100PP25815 95 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 BLVRBP30043 206 aaPredicted RBP9.94□□□□□ -0.82
HDAC6-228ENST00000486227 GLDNQ6ZMI3 551 aaPredicted RBP9.94□□□□□ -0.82
HDAC6-228ENST00000486227 ACOT7LQ6ZUV0 252 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 DVL3Q92997 716 aaPredicted RBP9.94□□□□□ -0.82
HDAC6-228ENST00000486227 TAAR8Q969N4 342 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 S1PR5Q9H228 398 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 TRAPPC2LH3BP13 241 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 TOX3O15405 576 aaPredicted RBP9.94□□□□□ -0.82
HDAC6-228ENST00000486227 TMEM127O75204 238 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 CHATP28329 748 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 PPA1Q15181 289 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 GFRALQ6UXV0 394 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 Q6ZTK2 550 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 ANGPTL5Q86XS5 388 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 SGPP2Q8IWX5 399 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 DND1Q8IYX4 353 aaKnown RBP9.94□□□□□ -0.82
HDAC6-228ENST00000486227 OR56B1Q8NGI3 324 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 SIGLEC11Q96RL6 698 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 TAS2R4Q9NYW5 299 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 EHFQ9NZC4 300 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 LUZP4Q9P127 313 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 FBXL4Q9UKA2 621 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 LOC100289279A0A1B0GTE1 492 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 RPS10-NUDT3A0A1W2PQS6 291 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 PATE3B3GLJ2 98 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 ZNF254O75437 659 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 SCGB2A1O75556 95 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 IFNA2P01563 188 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 RPS10P46783 165 aaKnown RBP9.93□□□□□ -0.82
HDAC6-228ENST00000486227 AKR1C2P52895 323 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 SLC25A35Q3KQZ1 300 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 EXOSC6Q5RKV6 272 aaKnown RBP9.93□□□□□ -0.82
HDAC6-228ENST00000486227 CD300LDQ6UXZ3 194 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 ZFP82Q8N141 532 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 SLC22A18ASQ8N1D0 253 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 OR10G3Q8NGC4 313 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 LINC00052Q96N35 136 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 TRIB1Q96RU8 372 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 SLC5A6Q9Y289 635 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 ALPK2Q86TB3 2170 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 CNOT1A5YKK6 2376 aaKnown RBP9.93□□□□□ -0.82
HDAC6-228ENST00000486227 IFITM5A6NNB3 132 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 MSR1P21757 451 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 ACHEP22303 614 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 CD79BP40259 229 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 EFNA3P52797 238 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 HLXQ14774 488 aaPredicted RBP9.93□□□□□ -0.82
HDAC6-228ENST00000486227 WDR5BQ86VZ2 330 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 OR51E1Q8TCB6 317 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 SSX3Q99909 188 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 CMSS1Q9BQ75 279 aaKnown RBP9.93□□□□□ -0.82
HDAC6-228ENST00000486227 ACKR4Q9NPB9 350 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 SLCO1C1Q9NYB5 712 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 PROCRQ9UNN8 238 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 DICER1Q9UPY3 1922 aaKnown RBP9.93□□□□□ -0.82
HDAC6-228ENST00000486227 CCDC163A0A0D9SF12 145 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 SPAARA0A1B0GVQ0 90 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 FITM1A5D6W6 292 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 CDK2AP1O14519 115 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 CBR3O75828 277 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 ERGP11308 486 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 LAP3P28838 519 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 CX3CR1P49238 355 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 AKR1C1Q04828 323 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 THEM4Q5T1C6 240 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 ZNF684Q5T5D7 378 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 OR10K2Q6IF99 312 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 LCN10Q6JVE6 187 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 TMEM88Q6PEY1 159 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 UQCC3Q6UW78 93 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 SPICQ8N5J4 248 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 FNDC9Q8TBE3 224 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 C14orf79Q96F83 325 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 VSTM2LQ96N03 204 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 HINT2Q9BX68 163 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 CYB5R1Q9UHQ9 305 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 CES1P1Q9UKY3 287 aa9.93□□□□□ -0.82
HDAC6-228ENST00000486227 LSM5Q9Y4Y9 91 aaKnown RBP9.93□□□□□ -0.82
HDAC6-228ENST00000486227 A0A1B0GV50 99 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 ANKUB1A6NFN9 424 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 ATG12O94817 140 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 GRB2P62993 217 aaKnown RBP9.92□□□□□ -0.82
HDAC6-228ENST00000486227 SLC17A1Q14916 467 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 EBPQ15125 230 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms