RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 TRAV38-1A0A0B4J264 116 aa6.6□□□□□ -1.35
XRN1-212ENST00000486211 A0A0G2JPF8 293 aa6.6□□□□□ -1.35
XRN1-212ENST00000486211 A6NDX4 124 aa6.6□□□□□ -1.35
XRN1-212ENST00000486211 KRTAP9-7A8MTY7 169 aa6.6□□□□□ -1.35
XRN1-212ENST00000486211 HNRNPCL2B2RXH8 293 aa6.6□□□□□ -1.35
XRN1-212ENST00000486211 HNRNPCL3B7ZW38 293 aa6.6□□□□□ -1.35
XRN1-212ENST00000486211 TPST2O60704 377 aa6.6□□□□□ -1.35
XRN1-212ENST00000486211 HNRNPCL1O60812 293 aaKnown RBP6.6□□□□□ -1.35
XRN1-212ENST00000486211 PTBP3O95758 552 aaKnown RBP6.6□□□□□ -1.35
XRN1-212ENST00000486211 SERPINE1P05121 402 aa6.6□□□□□ -1.35
XRN1-212ENST00000486211 HNRNPCL4P0DMR1 293 aa6.6□□□□□ -1.35
XRN1-212ENST00000486211 ETFAP13804 333 aa6.6□□□□□ -1.35
XRN1-212ENST00000486211 CPA3P15088 417 aa6.6□□□□□ -1.35
XRN1-212ENST00000486211 ACADSP16219 412 aa6.6□□□□□ -1.35
XRN1-212ENST00000486211 GDNFP39905 211 aa6.6□□□□□ -1.35
XRN1-212ENST00000486211 VDAC2P45880 294 aaPredicted RBP6.6□□□□□ -1.35
XRN1-212ENST00000486211 THBS3P49746 956 aa6.6□□□□□ -1.35
XRN1-212ENST00000486211 PCBD1P61457 104 aa6.6□□□□□ -1.35
XRN1-212ENST00000486211 OR8B8Q15620 311 aa6.6□□□□□ -1.35
XRN1-212ENST00000486211 INTS11Q5TA45 600 aaKnown RBP6.6□□□□□ -1.35
XRN1-212ENST00000486211 NCR3LG1Q68D85 454 aa6.6□□□□□ -1.35
XRN1-212ENST00000486211 FOXL2NBQ6ZUU3 175 aa6.6□□□□□ -1.35
XRN1-212ENST00000486211 RANBP3LQ86VV4 465 aaPredicted RBP6.6□□□□□ -1.35
XRN1-212ENST00000486211 C10orf107Q8IVU9 208 aa6.6□□□□□ -1.35
XRN1-212ENST00000486211 BOLLQ8N9W6 283 aaKnown RBP6.6□□□□□ -1.35
XRN1-212ENST00000486211 BHLHE23Q8NDY6 225 aa6.6□□□□□ -1.35
XRN1-212ENST00000486211 AGR3Q8TD06 166 aa6.6□□□□□ -1.35
XRN1-212ENST00000486211 ADAMTS16Q8TE57 1224 aa6.6□□□□□ -1.35
XRN1-212ENST00000486211 DDB2Q92466 427 aa6.6□□□□□ -1.35
XRN1-212ENST00000486211 COG8Q96MW5 612 aa6.6□□□□□ -1.35
XRN1-212ENST00000486211 TRIM36Q9NQ86 728 aa6.6□□□□□ -1.35
XRN1-212ENST00000486211 PTTG3PQ9NZH4 202 aa6.6□□□□□ -1.35
XRN1-212ENST00000486211 TCF19Q9Y242 345 aa6.6□□□□□ -1.35
XRN1-212ENST00000486211 TRBV23-1A0A0A0MS06 115 aa6.59□□□□□ -1.35
XRN1-212ENST00000486211 VGLL3A8MV65 326 aa6.59□□□□□ -1.35
XRN1-212ENST00000486211 CH25HO95992 272 aa6.59□□□□□ -1.35
XRN1-212ENST00000486211 SCG5P05408 212 aa6.59□□□□□ -1.35
XRN1-212ENST00000486211 ASAH2BP0C7U1 165 aa6.59□□□□□ -1.35
XRN1-212ENST00000486211 FPR3P25089 353 aa6.59□□□□□ -1.35
XRN1-212ENST00000486211 VEGFCP49767 419 aa6.59□□□□□ -1.35
XRN1-212ENST00000486211 UGT2B15P54855 530 aa6.59□□□□□ -1.35
XRN1-212ENST00000486211 CDH12P55289 794 aa6.59□□□□□ -1.35
XRN1-212ENST00000486211 IL5RAQ01344 420 aa6.59□□□□□ -1.35
XRN1-212ENST00000486211 MAD2L1Q13257 205 aaPredicted RBP6.59□□□□□ -1.35
XRN1-212ENST00000486211 PCLAFQ15004 111 aa6.59□□□□□ -1.35
XRN1-212ENST00000486211 OR1Q1Q15612 314 aa6.59□□□□□ -1.35
XRN1-212ENST00000486211 CCDC153Q494R4 210 aa6.59□□□□□ -1.35
XRN1-212ENST00000486211 ARMC4Q5T2S8 1044 aa6.59□□□□□ -1.35
XRN1-212ENST00000486211 TEX36Q5VZQ5 186 aa6.59□□□□□ -1.35
XRN1-212ENST00000486211 C10orf99Q6UWK7 81 aa6.59□□□□□ -1.35
XRN1-212ENST00000486211 LHFPL2Q6ZUX7 228 aa6.59□□□□□ -1.35
XRN1-212ENST00000486211 TMEM219Q86XT9 240 aa6.59□□□□□ -1.35
XRN1-212ENST00000486211 GCSAMQ8N6F7 178 aa6.59□□□□□ -1.35
XRN1-212ENST00000486211 TRIML2Q8N7C3 387 aa6.59□□□□□ -1.35
XRN1-212ENST00000486211 PCYOX1LQ8NBM8 494 aa6.59□□□□□ -1.35
XRN1-212ENST00000486211 GATAD1Q8WUU5 269 aa6.59□□□□□ -1.35
XRN1-212ENST00000486211 SLC7A6Q92536 515 aa6.59□□□□□ -1.35
XRN1-212ENST00000486211 HDAC2Q92769 488 aaKnown RBP6.59□□□□□ -1.35
XRN1-212ENST00000486211 ISOC1Q96CN7 298 aa6.59□□□□□ -1.35
XRN1-212ENST00000486211 ZNF583Q96ND8 569 aa6.59□□□□□ -1.35
XRN1-212ENST00000486211 WFDC6Q9BQY6 131 aa6.59□□□□□ -1.35
XRN1-212ENST00000486211 METTL8Q9H825 291 aaKnown RBP6.59□□□□□ -1.35
XRN1-212ENST00000486211 BCL2L10Q9HD36 194 aa6.59□□□□□ -1.35
XRN1-212ENST00000486211 SLCO1B3Q9NPD5 702 aa6.59□□□□□ -1.35
XRN1-212ENST00000486211 TMEM100Q9NV29 134 aa6.59□□□□□ -1.35
XRN1-212ENST00000486211 ADAM30Q9UKF2 790 aa6.59□□□□□ -1.35
XRN1-212ENST00000486211 PRPF19Q9UMS4 504 aaKnown RBP6.59□□□□□ -1.35
XRN1-212ENST00000486211 SF3B6Q9Y3B4 125 aaKnown RBP6.59□□□□□ -1.35
XRN1-212ENST00000486211 IGHV3OR15-7A0A075B7D8 119 aa6.58□□□□□ -1.36
XRN1-212ENST00000486211 A0A087WUV0 522 aaPredicted RBP6.58□□□□□ -1.36
XRN1-212ENST00000486211 A0A1W2PPM1 405 aa6.58□□□□□ -1.36
XRN1-212ENST00000486211 M0R1W7 72 aa6.58□□□□□ -1.36
XRN1-212ENST00000486211 F2RL2O00254 374 aa6.58□□□□□ -1.36
XRN1-212ENST00000486211 DOK2O60496 412 aa6.58□□□□□ -1.36
XRN1-212ENST00000486211 TPST1O60507 370 aa6.58□□□□□ -1.36
XRN1-212ENST00000486211 ALDOBP05062 364 aa6.58□□□□□ -1.36
XRN1-212ENST00000486211 BGNP21810 368 aa6.58□□□□□ -1.36
XRN1-212ENST00000486211 PRKAR1BP31321 381 aa6.58□□□□□ -1.36
XRN1-212ENST00000486211 RAB13P51153 203 aa6.58□□□□□ -1.36
XRN1-212ENST00000486211 LUMP51884 338 aaPredicted RBP6.58□□□□□ -1.36
XRN1-212ENST00000486211 DSTNP60981 165 aa6.58□□□□□ -1.36
XRN1-212ENST00000486211 C1orf94Q6P1W5 598 aa6.58□□□□□ -1.36
XRN1-212ENST00000486211 ZNF621Q6ZSS3 439 aa6.58□□□□□ -1.36
XRN1-212ENST00000486211 SLC30A8Q8IWU4 369 aa6.58□□□□□ -1.36
XRN1-212ENST00000486211 DYNAPQ8N1N2 210 aa6.58□□□□□ -1.36
XRN1-212ENST00000486211 FAM216BQ8N7L0 139 aa6.58□□□□□ -1.36
XRN1-212ENST00000486211 AENQ8WTP8 325 aaKnown RBP6.58□□□□□ -1.36
XRN1-212ENST00000486211 RASD2Q96D21 266 aa6.58□□□□□ -1.36
XRN1-212ENST00000486211 PANX1Q96RD7 426 aa6.58□□□□□ -1.36
XRN1-212ENST00000486211 P2RX4Q99571 388 aa6.58□□□□□ -1.36
XRN1-212ENST00000486211 CCL13Q99616 98 aa6.58□□□□□ -1.36
XRN1-212ENST00000486211 KRTAP4-11Q9BYQ6 195 aa6.58□□□□□ -1.36
XRN1-212ENST00000486211 KCNK9Q9NPC2 374 aa6.58□□□□□ -1.36
XRN1-212ENST00000486211 NANSQ9NR45 359 aa6.58□□□□□ -1.36
XRN1-212ENST00000486211 ZNF229Q9UJW7 825 aa6.58□□□□□ -1.36
XRN1-212ENST00000486211 CAPN7Q9Y6W3 813 aa6.58□□□□□ -1.36
XRN1-212ENST00000486211 HECTD4Q9Y4D8 3996 aa6.58□□□□□ -1.36
XRN1-212ENST00000486211 A0A1W2PRG6 482 aa6.57□□□□□ -1.36
XRN1-212ENST00000486211 OR6C6A6NF89 314 aa6.57□□□□□ -1.36
XRN1-212ENST00000486211 MCIDASD6RGH6 385 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms