RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 AQP6Q13520 282 aa14.74□□□□□ -0.05
VIM-205ENST00000485947 CLEC12BQ2HXU8 276 aa14.74□□□□□ -0.05
VIM-205ENST00000485947 HIKESHIQ53FT3 197 aa14.74□□□□□ -0.05
VIM-205ENST00000485947 ZNF684Q5T5D7 378 aa14.74□□□□□ -0.05
VIM-205ENST00000485947 DEGS2Q6QHC5 323 aa14.74□□□□□ -0.05
VIM-205ENST00000485947 RHOUQ7L0Q8 258 aa14.74□□□□□ -0.05
VIM-205ENST00000485947 VASH1Q7L8A9 365 aaPredicted RBP14.74□□□□□ -0.05
VIM-205ENST00000485947 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.74□□□□□ -0.05
VIM-205ENST00000485947 RFLNBQ8N5W9 214 aa14.74□□□□□ -0.05
VIM-205ENST00000485947 IL17RDQ8NFM7 739 aa14.74□□□□□ -0.05
VIM-205ENST00000485947 GATAD2BQ8WXI9 593 aa14.74□□□□□ -0.05
VIM-205ENST00000485947 NANOS1Q8WY41 292 aaKnown RBP14.74□□□□□ -0.05
VIM-205ENST00000485947 TMIGD2Q96BF3 282 aa14.74□□□□□ -0.05
VIM-205ENST00000485947 ZNF837Q96EG3 531 aaPredicted RBP14.74□□□□□ -0.05
VIM-205ENST00000485947 OPALINQ96PE5 141 aa14.74□□□□□ -0.05
VIM-205ENST00000485947 OR8B4Q96RC9 309 aa14.74□□□□□ -0.05
VIM-205ENST00000485947 KCNS3Q9BQ31 491 aa14.74□□□□□ -0.05
VIM-205ENST00000485947 ABHD6Q9BV23 337 aa14.74□□□□□ -0.05
VIM-205ENST00000485947 FAM192AQ9GZU8 254 aa14.74□□□□□ -0.05
VIM-205ENST00000485947 C1orf198Q9H425 327 aa14.74□□□□□ -0.05
VIM-205ENST00000485947 TRIM36Q9NQ86 728 aa14.74□□□□□ -0.05
VIM-205ENST00000485947 BABAM2Q9NXR7 383 aa14.74□□□□□ -0.05
VIM-205ENST00000485947 KLHDC2Q9Y2U9 406 aa14.74□□□□□ -0.05
VIM-205ENST00000485947 NSD1Q96L73 2696 aaPredicted RBP14.74□□□□□ -0.05
VIM-205ENST00000485947 PLCE1Q9P212 2302 aa14.74□□□□□ -0.05
VIM-205ENST00000485947 METTL15A6NJ78 407 aa14.73□□□□□ -0.05
VIM-205ENST00000485947 H7C417 338 aa14.73□□□□□ -0.05
VIM-205ENST00000485947 J3QLW9 94 aa14.73□□□□□ -0.05
VIM-205ENST00000485947 ZNF254O75437 659 aa14.73□□□□□ -0.05
VIM-205ENST00000485947 IGKV3-15P01624 115 aa14.73□□□□□ -0.05
VIM-205ENST00000485947 IGLV1-44P01699 117 aa14.73□□□□□ -0.05
VIM-205ENST00000485947 CRYAAP02489 173 aa14.73□□□□□ -0.05
VIM-205ENST00000485947 HSMCR30P0CW71 290 aa14.73□□□□□ -0.05
VIM-205ENST00000485947 CBR1P16152 277 aa14.73□□□□□ -0.05
VIM-205ENST00000485947 ZNF19P17023 458 aa14.73□□□□□ -0.05
VIM-205ENST00000485947 ARR3P36575 388 aa14.73□□□□□ -0.05
VIM-205ENST00000485947 RPS27P42677 84 aaKnown RBP14.73□□□□□ -0.05
VIM-205ENST00000485947 FABP6P51161 128 aa14.73□□□□□ -0.05
VIM-205ENST00000485947 GBX2P52951 348 aaPredicted RBP14.73□□□□□ -0.05
VIM-205ENST00000485947 ENDOGQ14249 297 aaKnown RBP14.73□□□□□ -0.05
VIM-205ENST00000485947 C11orf71Q6IPW1 123 aa14.73□□□□□ -0.05
VIM-205ENST00000485947 DNM1P46Q6ZS02 220 aa14.73□□□□□ -0.05
VIM-205ENST00000485947 DCXRQ7Z4W1 244 aa14.73□□□□□ -0.05
VIM-205ENST00000485947 SYT9Q86SS6 491 aa14.73□□□□□ -0.05
VIM-205ENST00000485947 ZNF679Q8IYX0 411 aa14.73□□□□□ -0.05
VIM-205ENST00000485947 ST7LQ8TDW4 575 aa14.73□□□□□ -0.05
VIM-205ENST00000485947 ZNF416Q9BWM5 594 aa14.73□□□□□ -0.05
VIM-205ENST00000485947 ISG20L2Q9H9L3 353 aaKnown RBP14.73□□□□□ -0.05
VIM-205ENST00000485947 EMC7Q9NPA0 242 aa14.73□□□□□ -0.05
VIM-205ENST00000485947 IKZF2Q9UKS7 526 aa14.73□□□□□ -0.05
VIM-205ENST00000485947 LHFPL6Q9Y693 200 aa14.73□□□□□ -0.05
VIM-205ENST00000485947 TRIM64BA6NI03 449 aa14.72□□□□□ -0.05
VIM-205ENST00000485947 VSTM5A8MXK1 200 aa14.72□□□□□ -0.05
VIM-205ENST00000485947 CCRL2O00421 344 aa14.72□□□□□ -0.05
VIM-205ENST00000485947 OR8G3PP0DMU2 310 aa14.72□□□□□ -0.05
VIM-205ENST00000485947 CPEP16870 476 aa14.72□□□□□ -0.05
VIM-205ENST00000485947 CDKN1AP38936 164 aa14.72□□□□□ -0.05
VIM-205ENST00000485947 OR12D2P58182 307 aa14.72□□□□□ -0.05
VIM-205ENST00000485947 GPR50Q13585 617 aa14.72□□□□□ -0.05
VIM-205ENST00000485947 TPBGQ13641 420 aa14.72□□□□□ -0.05
VIM-205ENST00000485947 CCDC58Q4VC31 144 aa14.72□□□□□ -0.05
VIM-205ENST00000485947 TP53I3Q53FA7 332 aa14.72□□□□□ -0.05
VIM-205ENST00000485947 ZNF813Q6ZN06 617 aa14.72□□□□□ -0.05
VIM-205ENST00000485947 KRT77Q7Z794 578 aa14.72□□□□□ -0.05
VIM-205ENST00000485947 KLBQ86Z14 1044 aa14.72□□□□□ -0.05
VIM-205ENST00000485947 LINC00346Q8IVM7 164 aa14.72□□□□□ -0.05
VIM-205ENST00000485947 SLC22A24Q8N4F4 322 aa14.72□□□□□ -0.05
VIM-205ENST00000485947 GJC3Q8NFK1 279 aa14.72□□□□□ -0.05
VIM-205ENST00000485947 RNF133Q8WVZ7 376 aa14.72□□□□□ -0.05
VIM-205ENST00000485947 UFD1Q92890 307 aa14.72□□□□□ -0.05
VIM-205ENST00000485947 YIPF6Q96EC8 236 aa14.72□□□□□ -0.05
VIM-205ENST00000485947 C1QTNF6Q9BXI9 259 aa14.72□□□□□ -0.05
VIM-205ENST00000485947 MROQ9BYG7 248 aa14.72□□□□□ -0.05
VIM-205ENST00000485947 TTTY10Q9BZA0 68 aa14.72□□□□□ -0.05
VIM-205ENST00000485947 KCNN2Q9H2S1 579 aa14.72□□□□□ -0.05
VIM-205ENST00000485947 MRM2Q9UI43 246 aaKnown RBP14.72□□□□□ -0.05
VIM-205ENST00000485947 GDF2Q9UK05 429 aaPredicted RBP14.72□□□□□ -0.05
VIM-205ENST00000485947 GNG8Q9UK08 70 aa14.72□□□□□ -0.05
VIM-205ENST00000485947 ATP23Q9Y6H3 246 aa14.72□□□□□ -0.05
VIM-205ENST00000485947 PMF1-BGLAPU3KQ54 211 aa14.72□□□□□ -0.05
VIM-205ENST00000485947 PRR32B1ATL7 298 aa14.71□□□□□ -0.05
VIM-205ENST00000485947 ZNF878C9JN71 531 aa14.71□□□□□ -0.05
VIM-205ENST00000485947 LY6G6DO95868 133 aa14.71□□□□□ -0.05
VIM-205ENST00000485947 ABHD16AO95870 558 aa14.71□□□□□ -0.05
VIM-205ENST00000485947 IGHV4-39P01824 125 aa14.71□□□□□ -0.05
VIM-205ENST00000485947 B4GALT1P15291 398 aa14.71□□□□□ -0.05
VIM-205ENST00000485947 DCTDP32321 178 aa14.71□□□□□ -0.05
VIM-205ENST00000485947 TGM4P49221 684 aa14.71□□□□□ -0.05
VIM-205ENST00000485947 RGS6P49758 472 aa14.71□□□□□ -0.05
VIM-205ENST00000485947 RIDAP52758 137 aaKnown RBP14.71□□□□□ -0.05
VIM-205ENST00000485947 PCBD1P61457 104 aa14.71□□□□□ -0.05
VIM-205ENST00000485947 HIST1H3AP68431 136 aa14.71□□□□□ -0.05
VIM-205ENST00000485947 ARF1P84077 181 aaKnown RBP14.71□□□□□ -0.05
VIM-205ENST00000485947 SPOCK1Q08629 439 aa14.71□□□□□ -0.05
VIM-205ENST00000485947 SCRN3Q0VDG4 424 aa14.71□□□□□ -0.05
VIM-205ENST00000485947 TNK1Q13470 666 aa14.71□□□□□ -0.05
VIM-205ENST00000485947 RAB35Q15286 201 aa14.71□□□□□ -0.05
VIM-205ENST00000485947 TSTQ16762 297 aaKnown RBP14.71□□□□□ -0.05
VIM-205ENST00000485947 HIST2H3PS2Q5TEC6 136 aa14.71□□□□□ -0.05
VIM-205ENST00000485947 OTPQ5XKR4 325 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms