RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 PXKQ7Z7A4 578 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 SERPINA11Q86U17 422 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 ANKRD46Q86W74 232 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 PEX5LQ8IYB4 626 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 ADGRG5Q8IZF4 528 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 CLIP4Q8N3C7 705 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 C10orf53Q8N6V4 93 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 ADPRHL1Q8NDY3 354 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 OR51G2Q8NGK0 314 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 OR6X1Q8NH79 312 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 GATAD1Q8WUU5 269 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 ZNF566Q969W8 418 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 TUBGCP3Q96CW5 907 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 CMBLQ96DG6 245 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 SLC41A3Q96GZ6 507 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 C4orf45Q96LM5 186 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 TRNT1Q96Q11 434 aaKnown RBP4.28□□□□□ -1.72
PTPN4-210ENST00000485247 ZNF607Q96SK3 696 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 C1orf50Q9BV19 199 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 CDCA4Q9BXL8 241 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 MUC13Q9H3R2 512 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 TUBB1Q9H4B7 451 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 MEAF6Q9HAF1 191 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 ELOVL3Q9HB03 270 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 NANSQ9NR45 359 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 ZMAT5Q9UDW3 170 aaKnown RBP4.28□□□□□ -1.72
PTPN4-210ENST00000485247 TSSC4Q9Y5U2 329 aaPredicted RBP4.28□□□□□ -1.72
PTPN4-210ENST00000485247 KPTNQ9Y664 436 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 F5H5P2 479 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 H3BQF6 201 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 F2RL2O00254 374 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 PLPP3O14495 311 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 DVL1O14640 695 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 HDAC3O15379 428 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 SYNGR1O43759 233 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 PEX11AO75192 247 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 RBMXL2O75526 392 aaKnown RBP4.27□□□□□ -1.73
PTPN4-210ENST00000485247 LYPLA1O75608 230 aaPredicted RBP4.27□□□□□ -1.73
PTPN4-210ENST00000485247 FCN3O75636 299 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 CPSF4O95639 269 aaKnown RBP4.27□□□□□ -1.73
PTPN4-210ENST00000485247 ECDO95905 644 aaPredicted RBP4.27□□□□□ -1.73
PTPN4-210ENST00000485247 THY1P04216 161 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 PGA4P0DJD7 388 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 PGA3P0DJD8 388 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 ADORA3P0DMS8 318 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 NR2F1P10589 423 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 NEFHP12036 1026 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 PRPS1L1P21108 318 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 CDAP32320 146 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 CHI3L1P36222 383 aaPredicted RBP4.27□□□□□ -1.73
PTPN4-210ENST00000485247 ANP32AP39687 249 aaKnown RBP4.27□□□□□ -1.73
PTPN4-210ENST00000485247 ZNF84P51523 738 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 RPS7P62081 194 aaKnown RBP4.27□□□□□ -1.73
PTPN4-210ENST00000485247 DYRK1AQ13627 763 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 MELKQ14680 651 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 OR8B8Q15620 311 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 LIN52Q52LA3 116 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 CFAP157Q5JU67 520 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 CEP85LQ5SZL2 805 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 IL23RQ5VWK5 629 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 OR4F3Q6IEY1 312 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 KCTD18Q6PI47 426 aaPredicted RBP4.27□□□□□ -1.73
PTPN4-210ENST00000485247 SLC35D2Q76EJ3 337 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 NUDCD3Q8IVD9 361 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 Q8N2B8 174 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 SLC35F6Q8N357 371 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 FGFRL1Q8N441 504 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 OR13G1Q8NGZ3 307 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 OR52P1PQ8NH57 321 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 ST8SIA4Q92187 359 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 MYDGFQ969H8 173 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 MCHR2Q969V1 340 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 ISOC1Q96CN7 298 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 HAVCR1Q96D42 359 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 SLC25A44Q96H78 314 aaPredicted RBP4.27□□□□□ -1.73
PTPN4-210ENST00000485247 TEX37Q96LM6 180 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 MOGAT1Q96PD6 335 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 ZNF347Q96SE7 839 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 PAFAH2Q99487 392 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 MCRIP2Q9BUT9 160 aaKnown RBP4.27□□□□□ -1.73
PTPN4-210ENST00000485247 SPATA5L1Q9BVQ7 753 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 MYLK2Q9H1R3 596 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 MRPS18AQ9NVS2 196 aaKnown RBP4.27□□□□□ -1.73
PTPN4-210ENST00000485247 MRPL39Q9NYK5 338 aaKnown RBP4.27□□□□□ -1.73
PTPN4-210ENST00000485247 RPS6KB2Q9UBS0 482 aa4.27□□□□□ -1.73
PTPN4-210ENST00000485247 MARCOQ9UEW3 520 aaPredicted RBP4.27□□□□□ -1.73
PTPN4-210ENST00000485247 NDRG4Q9ULP0 352 aaKnown RBP4.27□□□□□ -1.73
PTPN4-210ENST00000485247 WDR91A4D1P6 747 aa4.26□□□□□ -1.73
PTPN4-210ENST00000485247 PRSS29PA6NIE9 313 aa4.26□□□□□ -1.73
PTPN4-210ENST00000485247 AZIN1O14977 448 aa4.26□□□□□ -1.73
PTPN4-210ENST00000485247 MPPED1O15442 326 aa4.26□□□□□ -1.73
PTPN4-210ENST00000485247 MLNRO43193 412 aa4.26□□□□□ -1.73
PTPN4-210ENST00000485247 TUSC2O75896 110 aa4.26□□□□□ -1.73
PTPN4-210ENST00000485247 OR6A2O95222 327 aa4.26□□□□□ -1.73
PTPN4-210ENST00000485247 CHEK2O96017 543 aa4.26□□□□□ -1.73
PTPN4-210ENST00000485247 GYPAP02724 150 aa4.26□□□□□ -1.73
PTPN4-210ENST00000485247 BGLAPP02818 100 aa4.26□□□□□ -1.73
PTPN4-210ENST00000485247 HLA-DPB1P04440 258 aa4.26□□□□□ -1.73
PTPN4-210ENST00000485247 G6PDP11413 515 aa4.26□□□□□ -1.73
PTPN4-210ENST00000485247 MALP21145 153 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms