RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 TAF13Q15543 124 aa22.58■■□□□ 1.21
GTF3C4-202ENST00000483873 OR5L1Q8NGL2 311 aa22.58■■□□□ 1.21
GTF3C4-202ENST00000483873 MSL2Q9HCI7 577 aa22.58■■□□□ 1.21
GTF3C4-202ENST00000483873 MYOZ1Q9NP98 299 aaPredicted RBP22.58■■□□□ 1.21
GTF3C4-202ENST00000483873 TUBG2Q9NRH3 451 aa22.58■■□□□ 1.21
GTF3C4-202ENST00000483873 YLPM1P49750 1951 aaKnown RBP22.58■■□□□ 1.21
GTF3C4-202ENST00000483873 SETD2Q9BYW2 2564 aaPredicted RBP22.58■■□□□ 1.2
GTF3C4-202ENST00000483873 LOC100130705A0A1B0GUX0 176 aa22.57■■□□□ 1.2
GTF3C4-202ENST00000483873 SPRY3O43610 288 aa22.57■■□□□ 1.2
GTF3C4-202ENST00000483873 MRPL3P09001 348 aaKnown RBP22.57■■□□□ 1.2
GTF3C4-202ENST00000483873 SLC6A9P48067 706 aa22.57■■□□□ 1.2
GTF3C4-202ENST00000483873 HCCSP53701 268 aa22.57■■□□□ 1.2
GTF3C4-202ENST00000483873 CCL8P80075 99 aa22.57■■□□□ 1.2
GTF3C4-202ENST00000483873 SNAI3Q3KNW1 292 aa22.57■■□□□ 1.2
GTF3C4-202ENST00000483873 AADACL4Q5VUY2 407 aa22.57■■□□□ 1.2
GTF3C4-202ENST00000483873 FBXW12Q6X9E4 464 aa22.57■■□□□ 1.2
GTF3C4-202ENST00000483873 OTOSQ8NHW6 89 aa22.57■■□□□ 1.2
GTF3C4-202ENST00000483873 FAM81AQ8TBF8 368 aa22.57■■□□□ 1.2
GTF3C4-202ENST00000483873 RNF133Q8WVZ7 376 aa22.57■■□□□ 1.2
GTF3C4-202ENST00000483873 HAVCR1Q96D42 359 aa22.57■■□□□ 1.2
GTF3C4-202ENST00000483873 KCNJ15Q99712 375 aa22.57■■□□□ 1.2
GTF3C4-202ENST00000483873 GMPPBQ9Y5P6 360 aa22.57■■□□□ 1.2
GTF3C4-202ENST00000483873 LOC390937A0A1W2PQ73 354 aa22.57■■□□□ 1.2
GTF3C4-202ENST00000483873 PLSCR5A0PG75 271 aa22.57■■□□□ 1.2
GTF3C4-202ENST00000483873 VWC2LB2RUY7 222 aa22.57■■□□□ 1.2
GTF3C4-202ENST00000483873 SLC16A6O15403 523 aa22.57■■□□□ 1.2
GTF3C4-202ENST00000483873 IGHV1-46P01743 117 aa22.57■■□□□ 1.2
GTF3C4-202ENST00000483873 MT-ND5P03915 603 aa22.57■■□□□ 1.2
GTF3C4-202ENST00000483873 SLC2A1P11166 492 aa22.57■■□□□ 1.2
GTF3C4-202ENST00000483873 KITLGP21583 273 aa22.57■■□□□ 1.2
GTF3C4-202ENST00000483873 AQP4P55087 323 aa22.57■■□□□ 1.2
GTF3C4-202ENST00000483873 TSTQ16762 297 aaKnown RBP22.57■■□□□ 1.2
GTF3C4-202ENST00000483873 OR5AS1Q8N127 324 aa22.57■■□□□ 1.2
GTF3C4-202ENST00000483873 ZNF786Q8N393 782 aa22.57■■□□□ 1.2
GTF3C4-202ENST00000483873 THEM6Q8WUY1 208 aa22.57■■□□□ 1.2
GTF3C4-202ENST00000483873 PIMREGQ9BSJ6 248 aa22.57■■□□□ 1.2
GTF3C4-202ENST00000483873 LYNP07948 512 aa22.56■■□□□ 1.2
GTF3C4-202ENST00000483873 RAC2P15153 192 aa22.56■■□□□ 1.2
GTF3C4-202ENST00000483873 SLC25A16P16260 332 aa22.56■■□□□ 1.2
GTF3C4-202ENST00000483873 COL8A2P25067 703 aa22.56■■□□□ 1.2
GTF3C4-202ENST00000483873 CDC42P60953 191 aa22.56■■□□□ 1.2
GTF3C4-202ENST00000483873 LCN1P1Q5VSP4 162 aa22.56■■□□□ 1.2
GTF3C4-202ENST00000483873 NXNL2Q5VZ03 156 aa22.56■■□□□ 1.2
GTF3C4-202ENST00000483873 OR2T2Q6IF00 324 aa22.56■■□□□ 1.2
GTF3C4-202ENST00000483873 DRAM2Q6UX65 266 aa22.56■■□□□ 1.2
GTF3C4-202ENST00000483873 Q6ZR03 302 aa22.56■■□□□ 1.2
GTF3C4-202ENST00000483873 MEPCEQ7L2J0 689 aaKnown RBP22.56■■□□□ 1.2
GTF3C4-202ENST00000483873 BIVMQ86UB2 503 aa22.56■■□□□ 1.2
GTF3C4-202ENST00000483873 YIPF5Q969M3 257 aa22.56■■□□□ 1.2
GTF3C4-202ENST00000483873 TANC2Q9HCD6 1990 aa22.55■■□□□ 1.2
GTF3C4-202ENST00000483873 PCGF3Q3KNV8 242 aa22.55■■□□□ 1.2
GTF3C4-202ENST00000483873 SLC16A9Q7RTY1 509 aa22.55■■□□□ 1.2
GTF3C4-202ENST00000483873 ZNF283Q8N7M2 679 aa22.55■■□□□ 1.2
GTF3C4-202ENST00000483873 ZNF555Q8NEP9 628 aa22.55■■□□□ 1.2
GTF3C4-202ENST00000483873 UBE2FQ969M7 185 aa22.55■■□□□ 1.2
GTF3C4-202ENST00000483873 ADI1Q9BV57 179 aa22.55■■□□□ 1.2
GTF3C4-202ENST00000483873 BPESC1Q9GZL8 116 aa22.55■■□□□ 1.2
GTF3C4-202ENST00000483873 VCX3BQ9H321 246 aa22.55■■□□□ 1.2
GTF3C4-202ENST00000483873 NKIRAS2Q9NYR9 191 aa22.55■■□□□ 1.2
GTF3C4-202ENST00000483873 CGGBP1Q9UFW8 167 aaPredicted RBP22.55■■□□□ 1.2
GTF3C4-202ENST00000483873 N6AMT1Q9Y5N5 214 aa22.55■■□□□ 1.2
GTF3C4-202ENST00000483873 NDUFS8O00217 210 aa22.54■■□□□ 1.2
GTF3C4-202ENST00000483873 OPRL1P41146 370 aa22.54■■□□□ 1.2
GTF3C4-202ENST00000483873 NR4A2P43354 598 aa22.54■■□□□ 1.2
GTF3C4-202ENST00000483873 GRB2P62993 217 aaKnown RBP22.54■■□□□ 1.2
GTF3C4-202ENST00000483873 ADARB1P78563 741 aaKnown RBP22.54■■□□□ 1.2
GTF3C4-202ENST00000483873 GK2Q14410 553 aaPredicted RBP22.54■■□□□ 1.2
GTF3C4-202ENST00000483873 SPRNQ5BIV9 151 aa22.54■■□□□ 1.2
GTF3C4-202ENST00000483873 Q71RC1 249 aaPredicted RBP22.54■■□□□ 1.2
GTF3C4-202ENST00000483873 DHRSXQ8N5I4 330 aa22.54■■□□□ 1.2
GTF3C4-202ENST00000483873 ZNF454Q8N9F8 522 aa22.54■■□□□ 1.2
GTF3C4-202ENST00000483873 OR2AE1Q8NHA4 323 aa22.54■■□□□ 1.2
GTF3C4-202ENST00000483873 CYGBQ8WWM9 190 aa22.54■■□□□ 1.2
GTF3C4-202ENST00000483873 CYSLTR2Q9NS75 346 aa22.54■■□□□ 1.2
GTF3C4-202ENST00000483873 H2AFY2Q9P0M6 372 aaPredicted RBP22.54■■□□□ 1.2
GTF3C4-202ENST00000483873 H0YJX3 145 aa22.53■■□□□ 1.2
GTF3C4-202ENST00000483873 LILRA1O75019 489 aa22.53■■□□□ 1.2
GTF3C4-202ENST00000483873 CLIC3O95833 236 aa22.53■■□□□ 1.2
GTF3C4-202ENST00000483873 LY6G6DO95868 133 aa22.53■■□□□ 1.2
GTF3C4-202ENST00000483873 HSD11B1P28845 292 aa22.53■■□□□ 1.2
GTF3C4-202ENST00000483873 LIPAP38571 399 aa22.53■■□□□ 1.2
GTF3C4-202ENST00000483873 SLC15A1P46059 708 aa22.53■■□□□ 1.2
GTF3C4-202ENST00000483873 CX3CR1P49238 355 aa22.53■■□□□ 1.2
GTF3C4-202ENST00000483873 GGTLC2Q14390 218 aa22.53■■□□□ 1.2
GTF3C4-202ENST00000483873 OR8J1Q8NGP2 316 aa22.53■■□□□ 1.2
GTF3C4-202ENST00000483873 RDH5Q92781 318 aa22.53■■□□□ 1.2
GTF3C4-202ENST00000483873 YIPF3Q9GZM5 350 aa22.53■■□□□ 1.2
GTF3C4-202ENST00000483873 IMPAD1Q9NX62 359 aa22.53■■□□□ 1.2
GTF3C4-202ENST00000483873 DNAJC27Q9NZQ0 273 aa22.53■■□□□ 1.2
GTF3C4-202ENST00000483873 TPD52L2O43399 206 aaKnown RBP22.52■■□□□ 1.2
GTF3C4-202ENST00000483873 CDC14BO60729 498 aa22.52■■□□□ 1.2
GTF3C4-202ENST00000483873 H2BFMP0C1H6 154 aa22.52■■□□□ 1.2
GTF3C4-202ENST00000483873 ALOX5APP20292 161 aa22.52■■□□□ 1.2
GTF3C4-202ENST00000483873 GIFP27352 417 aa22.52■■□□□ 1.2
GTF3C4-202ENST00000483873 VHLP40337 213 aa22.52■■□□□ 1.2
GTF3C4-202ENST00000483873 MALLQ13021 153 aa22.52■■□□□ 1.2
GTF3C4-202ENST00000483873 GLYATL3Q5SZD4 288 aa22.52■■□□□ 1.2
GTF3C4-202ENST00000483873 LRRN1Q6UXK5 716 aa22.52■■□□□ 1.2
GTF3C4-202ENST00000483873 CLEC9AQ6UXN8 241 aa22.52■■□□□ 1.2
GTF3C4-202ENST00000483873 IZUMO2Q6UXV1 221 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms