RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 OTOSQ8NHW6 89 aa15.3■□□□□ 0.04
HDAC6-225ENST00000483506 COPS4Q9BT78 406 aa15.3■□□□□ 0.04
HDAC6-225ENST00000483506 ABHD6Q9BV23 337 aa15.3■□□□□ 0.04
HDAC6-225ENST00000483506 TOR3AQ9H497 397 aa15.3■□□□□ 0.04
HDAC6-225ENST00000483506 SAP30LQ9HAJ7 183 aa15.3■□□□□ 0.04
HDAC6-225ENST00000483506 TANC2Q9HCD6 1990 aa15.3■□□□□ 0.04
HDAC6-225ENST00000483506 MSL2Q9HCI7 577 aa15.3■□□□□ 0.04
HDAC6-225ENST00000483506 ZNF275Q9NSD4 429 aaPredicted RBP15.3■□□□□ 0.04
HDAC6-225ENST00000483506 DECR2Q9NUI1 292 aa15.3■□□□□ 0.04
HDAC6-225ENST00000483506 IGHV1-69-2A0A0G2JMI3 117 aa15.29■□□□□ 0.04
HDAC6-225ENST00000483506 CCDC182A6NF36 153 aa15.29■□□□□ 0.04
HDAC6-225ENST00000483506 SAC3D1A6NKF1 404 aa15.29■□□□□ 0.04
HDAC6-225ENST00000483506 IQCF6A8MYZ5 107 aa15.29■□□□□ 0.04
HDAC6-225ENST00000483506 SPRY3O43610 288 aa15.29■□□□□ 0.04
HDAC6-225ENST00000483506 TLX2O43763 284 aaPredicted RBP15.29■□□□□ 0.04
HDAC6-225ENST00000483506 LCATP04180 440 aa15.29■□□□□ 0.04
HDAC6-225ENST00000483506 SLC15A1P46059 708 aa15.29■□□□□ 0.04
HDAC6-225ENST00000483506 EIF2B1Q14232 305 aaKnown RBP15.29■□□□□ 0.04
HDAC6-225ENST00000483506 GK2Q14410 553 aaPredicted RBP15.29■□□□□ 0.04
HDAC6-225ENST00000483506 TSTQ16762 297 aaKnown RBP15.29■□□□□ 0.04
HDAC6-225ENST00000483506 KLHL12Q53G59 568 aa15.29■□□□□ 0.04
HDAC6-225ENST00000483506 EGLN1Q9GZT9 426 aa15.29■□□□□ 0.04
HDAC6-225ENST00000483506 USE1Q9NZ43 259 aa15.29■□□□□ 0.04
HDAC6-225ENST00000483506 ABCA2Q9BZC7 2435 aa15.29■□□□□ 0.04
HDAC6-225ENST00000483506 SELENOFO60613 162 aa15.28■□□□□ 0.04
HDAC6-225ENST00000483506 ALPLP05186 524 aa15.28■□□□□ 0.04
HDAC6-225ENST00000483506 IGHV4-31P0DP07 118 aa15.28■□□□□ 0.04
HDAC6-225ENST00000483506 SELEP16581 610 aa15.28■□□□□ 0.04
HDAC6-225ENST00000483506 OPRL1P41146 370 aa15.28■□□□□ 0.04
HDAC6-225ENST00000483506 CHN2P52757 468 aa15.28■□□□□ 0.04
HDAC6-225ENST00000483506 MALLQ13021 153 aa15.28■□□□□ 0.04
HDAC6-225ENST00000483506 APOFQ13790 326 aa15.28■□□□□ 0.04
HDAC6-225ENST00000483506 OR2T2Q6IF00 324 aa15.28■□□□□ 0.04
HDAC6-225ENST00000483506 USP51Q70EK9 711 aa15.28■□□□□ 0.04
HDAC6-225ENST00000483506 OR8G5Q8NG78 346 aa15.28■□□□□ 0.04
HDAC6-225ENST00000483506 TMEM163Q8TC26 289 aa15.28■□□□□ 0.04
HDAC6-225ENST00000483506 HPS1Q92902 700 aa15.28■□□□□ 0.04
HDAC6-225ENST00000483506 ELMOD3Q96FG2 381 aa15.28■□□□□ 0.04
HDAC6-225ENST00000483506 AMELYQ99218 206 aa15.28■□□□□ 0.04
HDAC6-225ENST00000483506 TEAD3Q99594 435 aa15.28■□□□□ 0.04
HDAC6-225ENST00000483506 S100A14Q9HCY8 104 aa15.28■□□□□ 0.04
HDAC6-225ENST00000483506 CENPMQ9NSP4 180 aa15.28■□□□□ 0.04
HDAC6-225ENST00000483506 APOC1P02654 83 aa15.27■□□□□ 0.04
HDAC6-225ENST00000483506 ANOS1P23352 680 aa15.27■□□□□ 0.04
HDAC6-225ENST00000483506 GPR6P46095 362 aaPredicted RBP15.27■□□□□ 0.04
HDAC6-225ENST00000483506 SLC6A9P48067 706 aa15.27■□□□□ 0.04
HDAC6-225ENST00000483506 TAF13Q15543 124 aa15.27■□□□□ 0.04
HDAC6-225ENST00000483506 SNAI3Q3KNW1 292 aa15.27■□□□□ 0.04
HDAC6-225ENST00000483506 LCN1P1Q5VSP4 162 aa15.27■□□□□ 0.04
HDAC6-225ENST00000483506 AADACL4Q5VUY2 407 aa15.27■□□□□ 0.04
HDAC6-225ENST00000483506 NXNL2Q5VZ03 156 aa15.27■□□□□ 0.04
HDAC6-225ENST00000483506 SLC16A9Q7RTY1 509 aa15.27■□□□□ 0.04
HDAC6-225ENST00000483506 C1orf159Q96HA4 380 aa15.27■□□□□ 0.04
HDAC6-225ENST00000483506 SLC30A2Q9BRI3 323 aa15.27■□□□□ 0.04
HDAC6-225ENST00000483506 YIPF3Q9GZM5 350 aa15.27■□□□□ 0.04
HDAC6-225ENST00000483506 E9PQ18 207 aa15.26■□□□□ 0.03
HDAC6-225ENST00000483506 CDC14BO60729 498 aa15.26■□□□□ 0.03
HDAC6-225ENST00000483506 LYNP07948 512 aa15.26■□□□□ 0.03
HDAC6-225ENST00000483506 HOXB4P17483 251 aaPredicted RBP15.26■□□□□ 0.03
HDAC6-225ENST00000483506 ALOX5APP20292 161 aa15.26■□□□□ 0.03
HDAC6-225ENST00000483506 TNFSF4P23510 183 aa15.26■□□□□ 0.03
HDAC6-225ENST00000483506 POLR2IP36954 125 aaKnown RBP15.26■□□□□ 0.03
HDAC6-225ENST00000483506 GZMKP49863 264 aa15.26■□□□□ 0.03
HDAC6-225ENST00000483506 ALDH3A2P51648 485 aa15.26■□□□□ 0.03
HDAC6-225ENST00000483506 PRKXP51817 358 aa15.26■□□□□ 0.03
HDAC6-225ENST00000483506 RPS7P62081 194 aaKnown RBP15.26■□□□□ 0.03
HDAC6-225ENST00000483506 TNFAIP6P98066 277 aaPredicted RBP15.26■□□□□ 0.03
HDAC6-225ENST00000483506 TRIP10Q15642 601 aa15.26■□□□□ 0.03
HDAC6-225ENST00000483506 SPRNQ5BIV9 151 aa15.26■□□□□ 0.03
HDAC6-225ENST00000483506 C6orf52Q5T4I8 152 aa15.26■□□□□ 0.03
HDAC6-225ENST00000483506 CYB5R2Q6BCY4 276 aa15.26■□□□□ 0.03
HDAC6-225ENST00000483506 PGAP1Q75T13 922 aa15.26■□□□□ 0.03
HDAC6-225ENST00000483506 PRSS45Q7RTY3 260 aa15.26■□□□□ 0.03
HDAC6-225ENST00000483506 TCEANCQ8N8B7 351 aa15.26■□□□□ 0.03
HDAC6-225ENST00000483506 OR13G1Q8NGZ3 307 aa15.26■□□□□ 0.03
HDAC6-225ENST00000483506 SPSB4Q96A44 273 aa15.26■□□□□ 0.03
HDAC6-225ENST00000483506 ZNF582Q96NG8 517 aaPredicted RBP15.26■□□□□ 0.03
HDAC6-225ENST00000483506 REPIN1Q9BWE0 567 aaKnown RBP15.26■□□□□ 0.03
HDAC6-225ENST00000483506 OPA3Q9H6K4 179 aa15.26■□□□□ 0.03
HDAC6-225ENST00000483506 HAO2Q9NYQ3 351 aa15.26■□□□□ 0.03
HDAC6-225ENST00000483506 IL19Q9UHD0 177 aa15.26■□□□□ 0.03
HDAC6-225ENST00000483506 KLHDC2Q9Y2U9 406 aa15.26■□□□□ 0.03
HDAC6-225ENST00000483506 C5orf63A6NC05 138 aa15.25■□□□□ 0.03
HDAC6-225ENST00000483506 M0R129 80 aa15.25■□□□□ 0.03
HDAC6-225ENST00000483506 EI24O14681 340 aa15.25■□□□□ 0.03
HDAC6-225ENST00000483506 TPD52L2O43399 206 aaKnown RBP15.25■□□□□ 0.03
HDAC6-225ENST00000483506 NAA10P41227 235 aaPredicted RBP15.25■□□□□ 0.03
HDAC6-225ENST00000483506 CX3CR1P49238 355 aa15.25■□□□□ 0.03
HDAC6-225ENST00000483506 ZNF92Q03936 586 aa15.25■□□□□ 0.03
HDAC6-225ENST00000483506 HFEQ30201 348 aa15.25■□□□□ 0.03
HDAC6-225ENST00000483506 GLYATL3Q5SZD4 288 aa15.25■□□□□ 0.03
HDAC6-225ENST00000483506 SPATC1Q76KD6 591 aa15.25■□□□□ 0.03
HDAC6-225ENST00000483506 MEPCEQ7L2J0 689 aaKnown RBP15.25■□□□□ 0.03
HDAC6-225ENST00000483506 OR5AS1Q8N127 324 aa15.25■□□□□ 0.03
HDAC6-225ENST00000483506 ZNF283Q8N7M2 679 aa15.25■□□□□ 0.03
HDAC6-225ENST00000483506 OR2Z1Q8NG97 314 aa15.25■□□□□ 0.03
HDAC6-225ENST00000483506 RIBC2Q9H4K1 309 aa15.25■□□□□ 0.03
HDAC6-225ENST00000483506 SP140LQ9H930 580 aa15.25■□□□□ 0.03
HDAC6-225ENST00000483506 CACNG2Q9Y698 323 aa15.25■□□□□ 0.03
HDAC6-225ENST00000483506 MALRD1Q5VYJ5 2156 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms