RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 ITLN1Q8WWA0 313 aa8.17□□□□□ -1.1
TMEM39A-207ENST00000482162 ZNRF4Q8WWF5 429 aa8.17□□□□□ -1.1
TMEM39A-207ENST00000482162 DVL3Q92997 716 aaPredicted RBP8.17□□□□□ -1.1
TMEM39A-207ENST00000482162 CLPTM1LQ96KA5 538 aa8.17□□□□□ -1.1
TMEM39A-207ENST00000482162 MEGF10Q96KG7 1140 aa8.17□□□□□ -1.1
TMEM39A-207ENST00000482162 LRGUKQ96M69 825 aa8.17□□□□□ -1.1
TMEM39A-207ENST00000482162 ZNF582Q96NG8 517 aaPredicted RBP8.17□□□□□ -1.1
TMEM39A-207ENST00000482162 RBM4Q9BWF3 364 aaKnown RBP8.17□□□□□ -1.1
TMEM39A-207ENST00000482162 EGLN3Q9H6Z9 239 aa8.17□□□□□ -1.1
TMEM39A-207ENST00000482162 TMEM165Q9HC07 324 aa8.17□□□□□ -1.1
TMEM39A-207ENST00000482162 RPRD1BQ9NQG5 326 aaKnown RBP8.17□□□□□ -1.1
TMEM39A-207ENST00000482162 MMP26Q9NRE1 261 aa8.17□□□□□ -1.1
TMEM39A-207ENST00000482162 PPP1R3CQ9UQK1 317 aa8.17□□□□□ -1.1
TMEM39A-207ENST00000482162 TENM1Q9UKZ4 2725 aa8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 TNFRSF11BO00300 401 aa8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 PSKH1P11801 424 aa8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 SELEP16581 610 aa8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 ZNF12P17014 697 aa8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 HOXB6P17509 224 aaKnown RBP8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 EPHA1P21709 976 aa8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 NOS3P29474 1203 aa8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 MDH2P40926 338 aaKnown RBP8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 MMP16P51512 607 aa8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 PAX8Q06710 450 aa8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 GK2Q14410 553 aaPredicted RBP8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 MICAQ29983 383 aa8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 SLC35F1Q5T1Q4 408 aa8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 DCAF12L2Q5VW00 463 aa8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 CYP2R1Q6VVX0 501 aa8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 DHFR2Q86XF0 187 aa8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 KLHL36Q8N4N3 616 aa8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 SDR9C7Q8NEX9 313 aa8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 OR9Q2Q8NGE9 314 aa8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 OR2T4Q8NH00 348 aa8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 Q8TCH9 128 aa8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 FAM216AQ8WUB2 273 aa8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 UTP4Q969X6 686 aaKnown RBP8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 PITX2Q99697 317 aa8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 ATF6BQ99941 703 aa8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 DGCR6LQ9BY27 220 aa8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 PLA2G12AQ9BZM1 189 aa8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 C7orf69Q9H7B7 122 aa8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 VNN3Q9NY84 501 aa8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 PTTG3PQ9NZH4 202 aa8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 BAIAP2Q9UQB8 552 aa8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 POMPQ9Y244 141 aa8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 POLR1DQ9Y2S0 133 aa8.16□□□□□ -1.1
TMEM39A-207ENST00000482162 TMEM89A2RUT3 159 aa8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 F5H5K5 113 aa8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 H0YL77 283 aa8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 ACOT8O14734 319 aa8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 PPIAL4GP0DN37 164 aa8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 PYCR1P32322 319 aa8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 CD200P41217 278 aa8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 CENPAP49450 140 aa8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 SRP9P49458 86 aaKnown RBP8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 RAD23AP54725 363 aa8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 SEC61A1P61619 476 aaKnown RBP8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 LCN2P80188 198 aa8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 MAB21L1Q13394 359 aa8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 GK3PQ14409 553 aa8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 KLF17Q5JT82 389 aaPredicted RBP8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 CLEC12AQ5QGZ9 265 aa8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 LINC01590Q5TEZ4 76 aa8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 OR2T5Q6IEZ7 315 aa8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 SHQ1Q6PI26 577 aaKnown RBP8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 LINC00346Q8IVM7 164 aa8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 OR5AS1Q8N127 324 aa8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 ATG16L2Q8NAA4 619 aa8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 CYB561A3Q8NBI2 242 aa8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 AQP11Q8NBQ7 271 aa8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 PLPP7Q8NBV4 271 aa8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 SLC37A3Q8NCC5 494 aa8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 OR2AJ1Q8NGZ0 328 aa8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 OR2T29Q8NH02 315 aa8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 OR4Q3Q8NH05 313 aa8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 ZNF418Q8TF45 676 aaPredicted RBP8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 STMN2Q93045 179 aa8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 ERGIC1Q969X5 290 aa8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 HCAR1Q9BXC0 346 aa8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 FN3KQ9H479 309 aa8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 OCEL1Q9H607 264 aa8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 TMEM100Q9NV29 134 aa8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 PCDHB10Q9UN67 800 aa8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 RRP15Q9Y3B9 282 aaKnown RBP8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 INSIG2Q9Y5U4 225 aa8.15□□□□□ -1.1
TMEM39A-207ENST00000482162 DOCK11Q5JSL3 2073 aa8.14□□□□□ -1.11
TMEM39A-207ENST00000482162 ISPDA4D126 451 aa8.14□□□□□ -1.11
TMEM39A-207ENST00000482162 C5orf63A6NC05 138 aa8.14□□□□□ -1.11
TMEM39A-207ENST00000482162 ARRDC5A6NEK1 342 aa8.14□□□□□ -1.11
TMEM39A-207ENST00000482162 AQP12BA6NM10 295 aa8.14□□□□□ -1.11
TMEM39A-207ENST00000482162 CD300LBA8K4G0 201 aa8.14□□□□□ -1.11
TMEM39A-207ENST00000482162 CEACAM18A8MTB9 384 aa8.14□□□□□ -1.11
TMEM39A-207ENST00000482162 ANKRD65E5RJM6 399 aa8.14□□□□□ -1.11
TMEM39A-207ENST00000482162 F5H5P2 479 aa8.14□□□□□ -1.11
TMEM39A-207ENST00000482162 TNFRSF13BO14836 293 aaPredicted RBP8.14□□□□□ -1.11
TMEM39A-207ENST00000482162 CCNB2O95067 398 aa8.14□□□□□ -1.11
TMEM39A-207ENST00000482162 ANOS1P23352 680 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms