RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 ZNF69Q9UC07 566 aa15.56■□□□□ 0.08
CLK1-211ENST00000481641 ARL2BPQ9Y2Y0 163 aa15.56■□□□□ 0.08
CLK1-211ENST00000481641 LYVE1Q9Y5Y7 322 aa15.56■□□□□ 0.08
CLK1-211ENST00000481641 A8MXK9 166 aa15.55■□□□□ 0.08
CLK1-211ENST00000481641 IDH3BO43837 385 aa15.55■□□□□ 0.08
CLK1-211ENST00000481641 PSKH1P11801 424 aa15.55■□□□□ 0.08
CLK1-211ENST00000481641 FPR2P25090 351 aa15.55■□□□□ 0.08
CLK1-211ENST00000481641 HOXA4Q00056 320 aaPredicted RBP15.55■□□□□ 0.08
CLK1-211ENST00000481641 ESCO2Q56NI9 601 aa15.55■□□□□ 0.08
CLK1-211ENST00000481641 C16orf89Q6UX73 402 aa15.55■□□□□ 0.08
CLK1-211ENST00000481641 PIGWQ7Z7B1 504 aa15.55■□□□□ 0.08
CLK1-211ENST00000481641 MUC20Q8N307 709 aaPredicted RBP15.55■□□□□ 0.08
CLK1-211ENST00000481641 SIGLECL1Q8N7X8 197 aa15.55■□□□□ 0.08
CLK1-211ENST00000481641 OR51L1Q8NGJ5 315 aa15.55■□□□□ 0.08
CLK1-211ENST00000481641 OR8D4Q8NGM9 314 aa15.55■□□□□ 0.08
CLK1-211ENST00000481641 OR10S1Q8NGN2 331 aa15.55■□□□□ 0.08
CLK1-211ENST00000481641 POP5Q969H6 163 aaKnown RBP15.55■□□□□ 0.08
CLK1-211ENST00000481641 DUX5Q96PT3 197 aa15.55■□□□□ 0.08
CLK1-211ENST00000481641 DDOQ99489 341 aa15.55■□□□□ 0.08
CLK1-211ENST00000481641 TMEM246Q9BRR3 403 aa15.55■□□□□ 0.08
CLK1-211ENST00000481641 CDH10Q9Y6N8 788 aa15.55■□□□□ 0.08
CLK1-211ENST00000481641 DOCK11Q5JSL3 2073 aa15.55■□□□□ 0.08
CLK1-211ENST00000481641 IGHV3OR16-10A0A075B7F0 116 aa15.54■□□□□ 0.08
CLK1-211ENST00000481641 C5orf63A6NC05 138 aa15.54■□□□□ 0.08
CLK1-211ENST00000481641 TNFRSF11BO00300 401 aa15.54■□□□□ 0.08
CLK1-211ENST00000481641 BHLHE40O14503 412 aa15.54■□□□□ 0.08
CLK1-211ENST00000481641 GASTP01350 101 aa15.54■□□□□ 0.08
CLK1-211ENST00000481641 RPS2P15880 293 aaKnown RBP15.54■□□□□ 0.08
CLK1-211ENST00000481641 CD80P33681 288 aa15.54■□□□□ 0.08
CLK1-211ENST00000481641 COMPP49747 757 aaPredicted RBP15.54■□□□□ 0.08
CLK1-211ENST00000481641 UBA52P62987 128 aaKnown RBP15.54■□□□□ 0.08
CLK1-211ENST00000481641 ECH1Q13011 328 aa15.54■□□□□ 0.08
CLK1-211ENST00000481641 MAB21L1Q13394 359 aa15.54■□□□□ 0.08
CLK1-211ENST00000481641 KLBQ86Z14 1044 aa15.54■□□□□ 0.08
CLK1-211ENST00000481641 C19orf18Q8NEA5 215 aa15.54■□□□□ 0.08
CLK1-211ENST00000481641 OR5V1Q9UGF6 321 aa15.54■□□□□ 0.08
CLK1-211ENST00000481641 NUP50Q9UKX7 468 aa15.54■□□□□ 0.08
CLK1-211ENST00000481641 SOX21Q9Y651 276 aaPredicted RBP15.54■□□□□ 0.08
CLK1-211ENST00000481641 IFNL4K9M1U5 179 aa15.53■□□□□ 0.08
CLK1-211ENST00000481641 ZNF823P16415 610 aa15.53■□□□□ 0.08
CLK1-211ENST00000481641 HMGA2P52926 109 aa15.53■□□□□ 0.08
CLK1-211ENST00000481641 TPTEP56180 551 aa15.53■□□□□ 0.08
CLK1-211ENST00000481641 SNAI3Q3KNW1 292 aa15.53■□□□□ 0.08
CLK1-211ENST00000481641 ZNF362Q5T0B9 420 aaPredicted RBP15.53■□□□□ 0.08
CLK1-211ENST00000481641 PRAMEF6Q5VXH4 476 aa15.53■□□□□ 0.08
CLK1-211ENST00000481641 PGAP1Q75T13 922 aa15.53■□□□□ 0.08
CLK1-211ENST00000481641 C3orf56Q8N813 242 aa15.53■□□□□ 0.08
CLK1-211ENST00000481641 PROKR2Q8NFJ6 384 aa15.53■□□□□ 0.08
CLK1-211ENST00000481641 OR52L1Q8NGH7 329 aa15.53■□□□□ 0.08
CLK1-211ENST00000481641 OR4C15Q8NGM1 316 aa15.53■□□□□ 0.08
CLK1-211ENST00000481641 OR9Q1Q8NGQ5 310 aa15.53■□□□□ 0.08
CLK1-211ENST00000481641 MRI1Q9BV20 369 aa15.53■□□□□ 0.08
CLK1-211ENST00000481641 SSBP3Q9BWW4 388 aaPredicted RBP15.53■□□□□ 0.08
CLK1-211ENST00000481641 VNN3Q9NY84 501 aa15.53■□□□□ 0.08
CLK1-211ENST00000481641 LRCH1Q9Y2L9 728 aa15.53■□□□□ 0.08
CLK1-211ENST00000481641 A0A1B0GWJ7 208 aa15.52■□□□□ 0.08
CLK1-211ENST00000481641 M0R135 149 aa15.52■□□□□ 0.08
CLK1-211ENST00000481641 KRT36O76013 467 aa15.52■□□□□ 0.08
CLK1-211ENST00000481641 PAX2Q02962 417 aa15.52■□□□□ 0.08
CLK1-211ENST00000481641 PAX8Q06710 450 aa15.52■□□□□ 0.08
CLK1-211ENST00000481641 MALLQ13021 153 aa15.52■□□□□ 0.08
CLK1-211ENST00000481641 ZNF770Q6IQ21 691 aaPredicted RBP15.52■□□□□ 0.08
CLK1-211ENST00000481641 LYPD2Q6UXB3 125 aa15.52■□□□□ 0.08
CLK1-211ENST00000481641 SLC37A3Q8NCC5 494 aa15.52■□□□□ 0.08
CLK1-211ENST00000481641 OR2AE1Q8NHA4 323 aa15.52■□□□□ 0.08
CLK1-211ENST00000481641 ZNF799Q96GE5 643 aa15.52■□□□□ 0.08
CLK1-211ENST00000481641 ZNF48Q96MX3 618 aaPredicted RBP15.52■□□□□ 0.08
CLK1-211ENST00000481641 NTN4Q9HB63 628 aa15.52■□□□□ 0.08
CLK1-211ENST00000481641 DDX28Q9NUL7 540 aaKnown RBP15.52■□□□□ 0.08
CLK1-211ENST00000481641 UFSP2Q9NUQ7 469 aa15.52■□□□□ 0.08
CLK1-211ENST00000481641 MIOXQ9UGB7 285 aa15.52■□□□□ 0.08
CLK1-211ENST00000481641 TCRBV5S2A0A599 114 aa15.51■□□□□ 0.07
CLK1-211ENST00000481641 LRRC30A6NM36 301 aa15.51■□□□□ 0.07
CLK1-211ENST00000481641 DCTN3O75935 186 aa15.51■□□□□ 0.07
CLK1-211ENST00000481641 CCNB2O95067 398 aa15.51■□□□□ 0.07
CLK1-211ENST00000481641 GYPBP06028 91 aa15.51■□□□□ 0.07
CLK1-211ENST00000481641 IGHV4-38-2P0DP08 117 aa15.51■□□□□ 0.07
CLK1-211ENST00000481641 CA6P23280 308 aa15.51■□□□□ 0.07
CLK1-211ENST00000481641 GNB2P62879 340 aa15.51■□□□□ 0.07
CLK1-211ENST00000481641 ZNF92Q03936 586 aa15.51■□□□□ 0.07
CLK1-211ENST00000481641 MPPED2Q15777 294 aa15.51■□□□□ 0.07
CLK1-211ENST00000481641 ZNF181Q2M3W8 571 aa15.51■□□□□ 0.07
CLK1-211ENST00000481641 TUSC1Q2TAM9 212 aa15.51■□□□□ 0.07
CLK1-211ENST00000481641 ZNF404Q494X3 552 aa15.51■□□□□ 0.07
CLK1-211ENST00000481641 RASSF6Q6ZTQ3 369 aa15.51■□□□□ 0.07
CLK1-211ENST00000481641 MRPL21Q7Z2W9 205 aaKnown RBP15.51■□□□□ 0.07
CLK1-211ENST00000481641 ZNF511Q8NB15 262 aa15.51■□□□□ 0.07
CLK1-211ENST00000481641 OR4Q3Q8NH05 313 aa15.51■□□□□ 0.07
CLK1-211ENST00000481641 SPRYD4Q8WW59 207 aaPredicted RBP15.51■□□□□ 0.07
CLK1-211ENST00000481641 NEIL1Q96FI4 390 aaPredicted RBP15.51■□□□□ 0.07
CLK1-211ENST00000481641 TSSK6Q9BXA6 273 aa15.51■□□□□ 0.07
CLK1-211ENST00000481641 TRIM15Q9C019 465 aa15.51■□□□□ 0.07
CLK1-211ENST00000481641 TBC1D23Q9NUY8 699 aa15.51■□□□□ 0.07
CLK1-211ENST00000481641 NDE1Q9NXR1 346 aa15.51■□□□□ 0.07
CLK1-211ENST00000481641 IL20Q9NYY1 176 aa15.51■□□□□ 0.07
CLK1-211ENST00000481641 ACTR3BQ9P1U1 418 aa15.51■□□□□ 0.07
CLK1-211ENST00000481641 KCNG2Q9UJ96 466 aa15.51■□□□□ 0.07
CLK1-211ENST00000481641 N6AMT1Q9Y5N5 214 aa15.51■□□□□ 0.07
CLK1-211ENST00000481641 CD300LBA8K4G0 201 aa15.5■□□□□ 0.07
CLK1-211ENST00000481641 B2RBV5 119 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms