RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 CHIT1Q13231 466 aa2.55□□□□□ -2
CBX3-207ENST00000481300 NAB1Q13506 487 aa2.55□□□□□ -2
CBX3-207ENST00000481300 TMED2Q15363 201 aa2.55□□□□□ -2
CBX3-207ENST00000481300 HNRNPA1L2Q32P51 320 aaKnown RBP2.55□□□□□ -2
CBX3-207ENST00000481300 TTMPQ5BVD1 217 aa2.55□□□□□ -2
CBX3-207ENST00000481300 C9orf64Q5T6V5 341 aa2.55□□□□□ -2
CBX3-207ENST00000481300 AGBL2Q5U5Z8 902 aa2.55□□□□□ -2
CBX3-207ENST00000481300 KCTD16Q68DU8 428 aa2.55□□□□□ -2
CBX3-207ENST00000481300 PDPK2PQ6A1A2 396 aa2.55□□□□□ -2
CBX3-207ENST00000481300 C6orf89Q6UWU4 347 aa2.55□□□□□ -2
CBX3-207ENST00000481300 KRTAP5-2Q701N4 177 aa2.55□□□□□ -2
CBX3-207ENST00000481300 GLT6D1Q7Z4J2 308 aa2.55□□□□□ -2
CBX3-207ENST00000481300 TMEM135Q86UB9 458 aa2.55□□□□□ -2
CBX3-207ENST00000481300 RALGPS2Q86X27 583 aaPredicted RBP2.55□□□□□ -2
CBX3-207ENST00000481300 LRRC6Q86X45 466 aa2.55□□□□□ -2
CBX3-207ENST00000481300 KRT222Q8N1A0 295 aa2.55□□□□□ -2
CBX3-207ENST00000481300 STK40Q8N2I9 435 aa2.55□□□□□ -2
CBX3-207ENST00000481300 FAM71E2Q8N5Q1 922 aa2.55□□□□□ -2
CBX3-207ENST00000481300 OTUD6BQ8N6M0 293 aa2.55□□□□□ -2
CBX3-207ENST00000481300 FNDC5Q8NAU1 212 aa2.55□□□□□ -2
CBX3-207ENST00000481300 OR52H1Q8NGJ2 320 aa2.55□□□□□ -2
CBX3-207ENST00000481300 MAGEE2Q8TD90 523 aaPredicted RBP2.55□□□□□ -2
CBX3-207ENST00000481300 PIH1D2Q8WWB5 315 aa2.55□□□□□ -2
CBX3-207ENST00000481300 OR8D1Q8WZ84 308 aa2.55□□□□□ -2
CBX3-207ENST00000481300 ARPC1AQ92747 370 aa2.55□□□□□ -2
CBX3-207ENST00000481300 CDKL2Q92772 493 aa2.55□□□□□ -2
CBX3-207ENST00000481300 MYDGFQ969H8 173 aa2.55□□□□□ -2
CBX3-207ENST00000481300 SLC41A3Q96GZ6 507 aa2.55□□□□□ -2
CBX3-207ENST00000481300 DNAJC1Q96KC8 554 aaKnown RBP2.55□□□□□ -2
CBX3-207ENST00000481300 PKNOX2Q96KN3 472 aa2.55□□□□□ -2
CBX3-207ENST00000481300 ATP6V1G3Q96LB4 118 aa2.55□□□□□ -2
CBX3-207ENST00000481300 LINC00167Q96N53 147 aa2.55□□□□□ -2
CBX3-207ENST00000481300 ZNF641Q96N77 438 aaPredicted RBP2.55□□□□□ -2
CBX3-207ENST00000481300 C20orf85Q9H1P6 137 aa2.55□□□□□ -2
CBX3-207ENST00000481300 TRABDQ9H4I3 376 aa2.55□□□□□ -2
CBX3-207ENST00000481300 SIAEQ9HAT2 523 aa2.55□□□□□ -2
CBX3-207ENST00000481300 TMBIM4Q9HC24 238 aa2.55□□□□□ -2
CBX3-207ENST00000481300 MRM3Q9HC36 420 aaKnown RBP2.55□□□□□ -2
CBX3-207ENST00000481300 MCCC2Q9HCC0 563 aa2.55□□□□□ -2
CBX3-207ENST00000481300 MED4Q9NPJ6 270 aa2.55□□□□□ -2
CBX3-207ENST00000481300 PSMC3IPQ9P2W1 217 aaPredicted RBP2.55□□□□□ -2
CBX3-207ENST00000481300 LGALS13Q9UHV8 139 aa2.55□□□□□ -2
CBX3-207ENST00000481300 ARL5AQ9Y689 179 aa2.55□□□□□ -2
CBX3-207ENST00000481300 PRRC2AP48634 2157 aaKnown RBP2.54□□□□□ -2
CBX3-207ENST00000481300 TET1Q8NFU7 2136 aa2.54□□□□□ -2
CBX3-207ENST00000481300 SCN1AP35498 2009 aa2.54□□□□□ -2
CBX3-207ENST00000481300 A0A0J9YYE9 177 aa2.54□□□□□ -2
CBX3-207ENST00000481300 A0A0U1RQS6 177 aa2.54□□□□□ -2
CBX3-207ENST00000481300 C1orf232A0A0U1RR37 186 aa2.54□□□□□ -2
CBX3-207ENST00000481300 TSPAN11A1L157 253 aa2.54□□□□□ -2
CBX3-207ENST00000481300 CCDC182A6NF36 153 aa2.54□□□□□ -2
CBX3-207ENST00000481300 LOC730098B7Z3J9 87 aa2.54□□□□□ -2
CBX3-207ENST00000481300 GOLGA8TH3BQL2 631 aa2.54□□□□□ -2
CBX3-207ENST00000481300 K7EQS6 105 aa2.54□□□□□ -2
CBX3-207ENST00000481300 CCL22O00626 93 aa2.54□□□□□ -2
CBX3-207ENST00000481300 PFDN6O15212 129 aa2.54□□□□□ -2
CBX3-207ENST00000481300 TRAF3IP2O43734 574 aaPredicted RBP2.54□□□□□ -2
CBX3-207ENST00000481300 CDH16O75309 829 aa2.54□□□□□ -2
CBX3-207ENST00000481300 CA11O75493 328 aa2.54□□□□□ -2
CBX3-207ENST00000481300 IL1BP01584 269 aa2.54□□□□□ -2
CBX3-207ENST00000481300 TRBC1P01850 177 aa2.54□□□□□ -2
CBX3-207ENST00000481300 KRT6AP02538 564 aa2.54□□□□□ -2
CBX3-207ENST00000481300 C1QAP02745 245 aa2.54□□□□□ -2
CBX3-207ENST00000481300 CTSLP07711 333 aa2.54□□□□□ -2
CBX3-207ENST00000481300 CHTF8P0CG12 524 aa2.54□□□□□ -2
CBX3-207ENST00000481300 MDKP21741 143 aaPredicted RBP2.54□□□□□ -2
CBX3-207ENST00000481300 CD151P48509 253 aa2.54□□□□□ -2
CBX3-207ENST00000481300 PSMD8P48556 350 aa2.54□□□□□ -2
CBX3-207ENST00000481300 DUSP3P51452 185 aaPredicted RBP2.54□□□□□ -2
CBX3-207ENST00000481300 ZNF140P52738 457 aaPredicted RBP2.54□□□□□ -2
CBX3-207ENST00000481300 MAGOHP61326 146 aaKnown RBP2.54□□□□□ -2
CBX3-207ENST00000481300 SEMG2Q02383 582 aa2.54□□□□□ -2
CBX3-207ENST00000481300 ZNF763Q0D2J5 394 aa2.54□□□□□ -2
CBX3-207ENST00000481300 DNAJC3Q13217 504 aa2.54□□□□□ -2
CBX3-207ENST00000481300 UNC119Q13432 240 aa2.54□□□□□ -2
CBX3-207ENST00000481300 OR5I1Q13606 314 aa2.54□□□□□ -2
CBX3-207ENST00000481300 CAPRIN1Q14444 709 aaKnown RBP2.54□□□□□ -2
CBX3-207ENST00000481300 PON2Q15165 354 aa2.54□□□□□ -2
CBX3-207ENST00000481300 TAF1AQ15573 450 aaPredicted RBP2.54□□□□□ -2
CBX3-207ENST00000481300 GPR157Q5UAW9 335 aa2.54□□□□□ -2
CBX3-207ENST00000481300 ZNF470Q6ECI4 717 aa2.54□□□□□ -2
CBX3-207ENST00000481300 TIFABQ6ZNK6 161 aa2.54□□□□□ -2
CBX3-207ENST00000481300 TAS2R42Q7RTR8 314 aa2.54□□□□□ -2
CBX3-207ENST00000481300 PRSS41Q7RTY9 318 aa2.54□□□□□ -2
CBX3-207ENST00000481300 EFL1Q7Z2Z2 1120 aaKnown RBP2.54□□□□□ -2
CBX3-207ENST00000481300 PAQR7Q86WK9 346 aa2.54□□□□□ -2
CBX3-207ENST00000481300 NUDCD3Q8IVD9 361 aa2.54□□□□□ -2
CBX3-207ENST00000481300 MMAAQ8IVH4 418 aaKnown RBP2.54□□□□□ -2
CBX3-207ENST00000481300 CNPY4Q8N129 248 aa2.54□□□□□ -2
CBX3-207ENST00000481300 LRRC75A-AS1Q8N1F1 130 aa2.54□□□□□ -2
CBX3-207ENST00000481300 RIBC1Q8N443 379 aaPredicted RBP2.54□□□□□ -2
CBX3-207ENST00000481300 BHLHE23Q8NDY6 225 aa2.54□□□□□ -2
CBX3-207ENST00000481300 FAM83FQ8NEG4 500 aaPredicted RBP2.54□□□□□ -2
CBX3-207ENST00000481300 OR4K2Q8NGD2 314 aa2.54□□□□□ -2
CBX3-207ENST00000481300 OR13C4Q8NGS5 318 aa2.54□□□□□ -2
CBX3-207ENST00000481300 DCAKDQ8WVC6 231 aa2.54□□□□□ -2
CBX3-207ENST00000481300 PEX13Q92968 403 aa2.54□□□□□ -2
CBX3-207ENST00000481300 TLCD1Q96CP7 247 aa2.54□□□□□ -2
CBX3-207ENST00000481300 C10orf35Q96D05 121 aa2.54□□□□□ -2
CBX3-207ENST00000481300 ECHDC3Q96DC8 303 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms