RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 CSNK1G2P78368 415 aa8.71□□□□□ -1.02
VEGFA-212ENST00000480614 JAG1P78504 1218 aa8.71□□□□□ -1.02
VEGFA-212ENST00000480614 SMAD2Q15796 467 aaKnown RBP8.71□□□□□ -1.02
VEGFA-212ENST00000480614 SMN1Q16637 294 aaKnown RBP8.71□□□□□ -1.02
VEGFA-212ENST00000480614 DOPEY1Q5JWR5 2465 aa8.71□□□□□ -1.02
VEGFA-212ENST00000480614 COX20Q5RI15 118 aa8.71□□□□□ -1.02
VEGFA-212ENST00000480614 NEIL1Q96FI4 390 aaPredicted RBP8.71□□□□□ -1.02
VEGFA-212ENST00000480614 ACTL7AQ9Y615 435 aa8.71□□□□□ -1.02
VEGFA-212ENST00000480614 LIMS3P0CW19 117 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 LIMS4P0CW20 117 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 SYT14P1Q58G82 188 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 SAXO2Q658L1 398 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 ISL2Q96A47 359 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 ARRDC3Q96B67 414 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 MRPS24Q96EL2 167 aaKnown RBP8.7□□□□□ -1.02
VEGFA-212ENST00000480614 POM121L2Q96KW2 1035 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 IGLV3-10A0A075B6K4 115 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 CALCRP30988 508 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 KIR2DS2P43631 304 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 LAIR1Q6GTX8 287 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 ARHGEF39Q8N4T4 335 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 OR10Z1Q8NGY1 313 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 HRH3Q9Y5N1 445 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 DDX60LQ5H9U9 1706 aaKnown RBP8.7□□□□□ -1.02
VEGFA-212ENST00000480614 TMEM235A6NFC5 223 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 SNRPGP15A8MWD9 76 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 OR5G3P0C626 314 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 GNB2P62879 340 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 HYAL4Q2M3T9 481 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 PLA1AQ53H76 456 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 RPUSD3Q6P087 351 aaKnown RBP8.7□□□□□ -1.02
VEGFA-212ENST00000480614 DYNC2LI1Q8TCX1 351 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 LHX4Q969G2 390 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 ZC3HAV1LQ96H79 300 aaKnown RBP8.7□□□□□ -1.02
VEGFA-212ENST00000480614 TXNIPQ9H3M7 391 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 COX7A2P2O60397 106 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 POU2F2P09086 479 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 RRASP10301 218 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 ALOX5APP20292 161 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 ZNF468Q5VIY5 522 aaPredicted RBP8.7□□□□□ -1.02
VEGFA-212ENST00000480614 ZNF787Q6DD87 383 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 FAM71E1Q6IPT2 247 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 SYS1Q8N2H4 156 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 OR2T6Q8NHC8 308 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 MRGPRX4Q96LA9 322 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 CDCA4Q9BXL8 241 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 GSX2Q9BZM3 304 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 CTDSP1Q9GZU7 261 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 SLC31A2O15432 143 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 OR7C2O60412 319 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 AQP6Q13520 282 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 C9orf152Q5JTZ5 239 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 LYRM2Q9NU23 88 aaPredicted RBP8.7□□□□□ -1.02
VEGFA-212ENST00000480614 R4GMQ9 66 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 CRYABP02511 175 aaKnown RBP8.7□□□□□ -1.02
VEGFA-212ENST00000480614 HTRA4P83105 476 aaPredicted RBP8.7□□□□□ -1.02
VEGFA-212ENST00000480614 H3F3CQ6NXT2 135 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 OR10P1Q8NGE3 313 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 RLN3Q8WXF3 142 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 MED18Q9BUE0 208 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 MEIKINA0A087WXM9 373 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 AQP7O14520 342 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 EFSO43281 561 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 AKR7A3O95154 331 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 CNN1P51911 297 aaKnown RBP8.7□□□□□ -1.02
VEGFA-212ENST00000480614 PRTGQ2VWP7 1150 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 KLHDC1Q8N7A1 406 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 BCORP1Q8N888 145 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 OR10G3Q8NGC4 313 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 SLC17A5Q9NRA2 495 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 FBXO34Q9NWN3 711 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 USF3Q68DE3 2245 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 FCN2Q15485 313 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 ETFRF1Q6IPR1 90 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 ANKRD16Q6P6B7 361 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 ZNF511Q8NB15 262 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 SLAMF6Q96DU3 332 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 AMBRA1Q9C0C7 1298 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 IFT22Q9H7X7 185 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 CXXC1Q9P0U4 656 aaPredicted RBP8.7□□□□□ -1.02
VEGFA-212ENST00000480614 GLULP15104 373 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 TM4SF4P48230 202 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 AGFG1P52594 562 aaKnown RBP8.7□□□□□ -1.02
VEGFA-212ENST00000480614 ZNF534Q76KX8 674 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 SELENOFO60613 162 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 NTF3P20783 257 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 AFMIDQ63HM1 303 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 WDR61Q9GZS3 305 aaKnown RBP8.7□□□□□ -1.02
VEGFA-212ENST00000480614 OCIAD1Q9NX40 245 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 ZNF391Q9UJN7 358 aa8.7□□□□□ -1.02
VEGFA-212ENST00000480614 TRGV10A0A0A0MS01 117 aa8.69□□□□□ -1.02
VEGFA-212ENST00000480614 CRYAAP02489 173 aa8.69□□□□□ -1.02
VEGFA-212ENST00000480614 TFAP2AP05549 437 aa8.69□□□□□ -1.02
VEGFA-212ENST00000480614 ADPRHP54922 357 aa8.69□□□□□ -1.02
VEGFA-212ENST00000480614 RNF151Q2KHN1 245 aa8.69□□□□□ -1.02
VEGFA-212ENST00000480614 LRRC10Q5BKY1 277 aa8.69□□□□□ -1.02
VEGFA-212ENST00000480614 SLAMF8Q9P0V8 285 aa8.69□□□□□ -1.02
VEGFA-212ENST00000480614 A0A1B0GUH1 482 aa8.69□□□□□ -1.02
VEGFA-212ENST00000480614 SERPINE3A8MV23 424 aa8.69□□□□□ -1.02
VEGFA-212ENST00000480614 RFC3P40938 356 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms