RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 MAGT1Q9H0U3 335 aa12.2□□□□□ -0.46
USP42-206ENST00000479544 SEMA6CQ9H3T2 930 aa12.2□□□□□ -0.46
USP42-206ENST00000479544 GAB2Q9UQC2 676 aa12.2□□□□□ -0.46
USP42-206ENST00000479544 PHF1O43189 567 aaPredicted RBP12.2□□□□□ -0.46
USP42-206ENST00000479544 HCRTR1O43613 425 aa12.2□□□□□ -0.46
USP42-206ENST00000479544 MIDNQ504T8 468 aa12.2□□□□□ -0.46
USP42-206ENST00000479544 BCORP1Q8N888 145 aa12.2□□□□□ -0.46
USP42-206ENST00000479544 G0S2P27469 103 aa12.2□□□□□ -0.46
USP42-206ENST00000479544 EIF2S3P41091 472 aaKnown RBP12.2□□□□□ -0.46
USP42-206ENST00000479544 ZNF136P52737 540 aa12.2□□□□□ -0.46
USP42-206ENST00000479544 RAP1AP62834 184 aa12.2□□□□□ -0.46
USP42-206ENST00000479544 ZFP62Q8NB50 900 aaPredicted RBP12.2□□□□□ -0.46
USP42-206ENST00000479544 PLPP5Q8NEB5 264 aa12.2□□□□□ -0.46
USP42-206ENST00000479544 KCNG3Q8TAE7 436 aa12.2□□□□□ -0.46
USP42-206ENST00000479544 TOLLIPQ9H0E2 274 aa12.2□□□□□ -0.46
USP42-206ENST00000479544 C1orf123Q9NWV4 160 aa12.2□□□□□ -0.46
USP42-206ENST00000479544 ST6GAL1P15907 406 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 HNRNPA2B1P22626 353 aaKnown RBP12.19□□□□□ -0.46
USP42-206ENST00000479544 GLRA1P23415 457 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 RAB38P57729 211 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 FMODQ06828 376 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 DPTQ07507 201 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 INPP5JQ15735 1006 aaPredicted RBP12.19□□□□□ -0.46
USP42-206ENST00000479544 RNF212Q495C1 297 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 RAET1LQ5VY80 246 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 OR5M8Q8NGP6 311 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 OR2G3Q8NGZ4 309 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 PGLYRP3Q96LB9 341 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 STACQ99469 402 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 NIPSNAP3BQ9BS92 247 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 C1orf198Q9H425 327 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 KIR3DX1Q9H7L2 352 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 ST6GALNAC2Q9UJ37 374 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 KIF26BQ2KJY2 2108 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 NPIPA2E9PIF3 369 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 NPIPA3F8WFD2 350 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 PIN1P1O15428 100 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 OGG1O15527 345 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 QDPRP09417 244 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 MTCP1P56278 107 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 MLF1P58340 268 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 ZNF77Q15935 545 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 VN1R4Q7Z5H5 301 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 LILRB2Q8N423 598 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 CLCC1Q96S66 551 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 NMNAT2Q9BZQ4 307 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 GHRLQ9UBU3 117 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 LILRB5O75023 590 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 SCGB1D1O95968 90 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 PRSS12P56730 875 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 FCRL6Q6DN72 434 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 FAM199XQ6PEV8 388 aaPredicted RBP12.19□□□□□ -0.46
USP42-206ENST00000479544 LDLRAD3Q86YD5 345 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 OR56B1Q8NGI3 324 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 SGK3Q96BR1 496 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 C4orf45Q96LM5 186 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 RASL12Q9NYN1 266 aa12.19□□□□□ -0.46
USP42-206ENST00000479544 TET1Q8NFU7 2136 aa12.18□□□□□ -0.46
USP42-206ENST00000479544 C9orf170A2RU37 121 aa12.18□□□□□ -0.46
USP42-206ENST00000479544 HRKO00198 91 aa12.18□□□□□ -0.46
USP42-206ENST00000479544 CEACAM5P06731 702 aa12.18□□□□□ -0.46
USP42-206ENST00000479544 ABOP16442 354 aa12.18□□□□□ -0.46
USP42-206ENST00000479544 RFC3P40938 356 aa12.18□□□□□ -0.46
USP42-206ENST00000479544 HOXA1P49639 335 aaPredicted RBP12.18□□□□□ -0.46
USP42-206ENST00000479544 RPL23AP62750 156 aaKnown RBP12.18□□□□□ -0.46
USP42-206ENST00000479544 OVCH2Q7RTZ1 564 aa12.18□□□□□ -0.46
USP42-206ENST00000479544 FAM160A2Q8N612 972 aaPredicted RBP12.18□□□□□ -0.46
USP42-206ENST00000479544 STT3BQ8TCJ2 826 aa12.18□□□□□ -0.46
USP42-206ENST00000479544 BORCS8Q96FH0 119 aa12.18□□□□□ -0.46
USP42-206ENST00000479544 TOE1Q96GM8 510 aaKnown RBP12.18□□□□□ -0.46
USP42-206ENST00000479544 ZNF2Q9BSG1 426 aaPredicted RBP12.18□□□□□ -0.46
USP42-206ENST00000479544 RAB33BQ9H082 229 aa12.18□□□□□ -0.46
USP42-206ENST00000479544 OR51B6Q9H340 312 aa12.18□□□□□ -0.46
USP42-206ENST00000479544 SERTAD3Q9UJW9 196 aa12.18□□□□□ -0.46
USP42-206ENST00000479544 GSTZ1O43708 216 aaPredicted RBP12.18□□□□□ -0.46
USP42-206ENST00000479544 BTCP35070 178 aa12.18□□□□□ -0.46
USP42-206ENST00000479544 ZNF239Q16600 458 aaKnown RBP12.18□□□□□ -0.46
USP42-206ENST00000479544 RPUSD3Q6P087 351 aaKnown RBP12.18□□□□□ -0.46
USP42-206ENST00000479544 SLC37A2Q8TED4 501 aa12.18□□□□□ -0.46
USP42-206ENST00000479544 SDSLQ96GA7 329 aa12.18□□□□□ -0.46
USP42-206ENST00000479544 MRGPRX3Q96LB0 322 aa12.18□□□□□ -0.46
USP42-206ENST00000479544 OR10A2Q9H208 303 aa12.18□□□□□ -0.46
USP42-206ENST00000479544 POLMQ9NP87 494 aaPredicted RBP12.18□□□□□ -0.46
USP42-206ENST00000479544 LHX9Q9NQ69 397 aa12.18□□□□□ -0.46
USP42-206ENST00000479544 B3GALT5Q9Y2C3 310 aa12.18□□□□□ -0.46
USP42-206ENST00000479544 CYB5BO43169 146 aa12.18□□□□□ -0.46
USP42-206ENST00000479544 FBLP22087 321 aaKnown RBP12.18□□□□□ -0.46
USP42-206ENST00000479544 RPL27P61353 136 aaKnown RBP12.18□□□□□ -0.46
USP42-206ENST00000479544 MLC1Q15049 377 aa12.18□□□□□ -0.46
USP42-206ENST00000479544 DEFB133Q30KQ1 61 aa12.18□□□□□ -0.46
USP42-206ENST00000479544 OR2L13Q8N349 312 aa12.18□□□□□ -0.46
USP42-206ENST00000479544 UBAC2Q8NBM4 344 aa12.18□□□□□ -0.46
USP42-206ENST00000479544 ROBO4Q8WZ75 1007 aa12.18□□□□□ -0.46
USP42-206ENST00000479544 TMPRSS13Q9BYE2 586 aa12.18□□□□□ -0.46
USP42-206ENST00000479544 SFXN1Q9H9B4 322 aa12.18□□□□□ -0.46
USP42-206ENST00000479544 A0A087WV48 116 aa12.17□□□□□ -0.46
USP42-206ENST00000479544 G3V3Y1 287 aa12.17□□□□□ -0.46
USP42-206ENST00000479544 H3BP45 60 aa12.17□□□□□ -0.46
USP42-206ENST00000479544 HEXBP07686 556 aa12.17□□□□□ -0.46
USP42-206ENST00000479544 ABCD3P28288 659 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms