RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 REG4Q9BYZ8 158 aa17.49■□□□□ 0.39
VARS-224ENST00000479051 DLL4Q9NR61 685 aa17.49■□□□□ 0.39
VARS-224ENST00000479051 WARS2Q9UGM6 360 aaKnown RBP17.49■□□□□ 0.39
VARS-224ENST00000479051 IGHV4-30-2A0A087WSY4 118 aa17.48■□□□□ 0.39
VARS-224ENST00000479051 RNF223E7ERA6 249 aa17.48■□□□□ 0.39
VARS-224ENST00000479051 SMAD7O15105 426 aaKnown RBP17.48■□□□□ 0.39
VARS-224ENST00000479051 SPRY3O43610 288 aa17.48■□□□□ 0.39
VARS-224ENST00000479051 OPRL1P41146 370 aa17.48■□□□□ 0.39
VARS-224ENST00000479051 CX3CR1P49238 355 aa17.48■□□□□ 0.39
VARS-224ENST00000479051 MMP15P51511 669 aa17.48■□□□□ 0.39
VARS-224ENST00000479051 MRPS11P82912 194 aaKnown RBP17.48■□□□□ 0.39
VARS-224ENST00000479051 POU4F2Q12837 409 aa17.48■□□□□ 0.39
VARS-224ENST00000479051 HLXQ14774 488 aaPredicted RBP17.48■□□□□ 0.39
VARS-224ENST00000479051 MRPL21Q7Z2W9 205 aaKnown RBP17.48■□□□□ 0.39
VARS-224ENST00000479051 BCDIN3DQ7Z5W3 292 aaKnown RBP17.48■□□□□ 0.39
VARS-224ENST00000479051 NAA40Q86UY6 237 aa17.48■□□□□ 0.39
VARS-224ENST00000479051 ZNF786Q8N393 782 aa17.48■□□□□ 0.39
VARS-224ENST00000479051 ZNF582Q96NG8 517 aaPredicted RBP17.48■□□□□ 0.39
VARS-224ENST00000479051 RDH12Q96NR8 316 aa17.48■□□□□ 0.39
VARS-224ENST00000479051 MNTQ99583 582 aa17.48■□□□□ 0.39
VARS-224ENST00000479051 SLC29A1Q99808 456 aa17.48■□□□□ 0.39
VARS-224ENST00000479051 EGLN1Q9GZT9 426 aa17.48■□□□□ 0.39
VARS-224ENST00000479051 NIPAL2Q9H841 368 aa17.48■□□□□ 0.39
VARS-224ENST00000479051 HAO2Q9NYQ3 351 aa17.48■□□□□ 0.39
VARS-224ENST00000479051 GMPPBQ9Y5P6 360 aa17.48■□□□□ 0.39
VARS-224ENST00000479051 FLNAP21333 2647 aaKnown RBP17.47■□□□□ 0.39
VARS-224ENST00000479051 PHYHO14832 338 aa17.47■□□□□ 0.39
VARS-224ENST00000479051 ANXA2P07355 339 aaKnown RBP17.47■□□□□ 0.39
VARS-224ENST00000479051 ALOX5APP20292 161 aa17.47■□□□□ 0.39
VARS-224ENST00000479051 TNFSF4P23510 183 aa17.47■□□□□ 0.39
VARS-224ENST00000479051 MAGEB1P43366 347 aa17.47■□□□□ 0.39
VARS-224ENST00000479051 CCL8P80075 99 aa17.47■□□□□ 0.39
VARS-224ENST00000479051 TMED1Q13445 227 aa17.47■□□□□ 0.39
VARS-224ENST00000479051 TSTQ16762 297 aaKnown RBP17.47■□□□□ 0.39
VARS-224ENST00000479051 PGAP1Q75T13 922 aa17.47■□□□□ 0.39
VARS-224ENST00000479051 KRT77Q7Z794 578 aa17.47■□□□□ 0.39
VARS-224ENST00000479051 ASB17Q8WXJ9 295 aa17.47■□□□□ 0.39
VARS-224ENST00000479051 RDH5Q92781 318 aa17.47■□□□□ 0.39
VARS-224ENST00000479051 MBOAT4Q96T53 435 aa17.47■□□□□ 0.39
VARS-224ENST00000479051 AMELYQ99218 206 aa17.47■□□□□ 0.39
VARS-224ENST00000479051 OPA3Q9H6K4 179 aa17.47■□□□□ 0.39
VARS-224ENST00000479051 SAP30LQ9HAJ7 183 aa17.47■□□□□ 0.39
VARS-224ENST00000479051 N6AMT1Q9Y5N5 214 aa17.47■□□□□ 0.39
VARS-224ENST00000479051 MED13LQ71F56 2210 aa17.47■□□□□ 0.39
VARS-224ENST00000479051 ZSCAN5BA6NJL1 495 aa17.46■□□□□ 0.39
VARS-224ENST00000479051 SNTNA6NMZ2 147 aa17.46■□□□□ 0.39
VARS-224ENST00000479051 IGHV1-46P01743 117 aa17.46■□□□□ 0.39
VARS-224ENST00000479051 HPXP02790 462 aa17.46■□□□□ 0.39
VARS-224ENST00000479051 ADH4P08319 380 aa17.46■□□□□ 0.39
VARS-224ENST00000479051 HTR1FP30939 366 aa17.46■□□□□ 0.39
VARS-224ENST00000479051 ATP6V1E1P36543 226 aa17.46■□□□□ 0.39
VARS-224ENST00000479051 GK2Q14410 553 aaPredicted RBP17.46■□□□□ 0.39
VARS-224ENST00000479051 TMEM255AQ5JRV8 349 aa17.46■□□□□ 0.39
VARS-224ENST00000479051 MEDAGQ5VYS4 303 aa17.46■□□□□ 0.39
VARS-224ENST00000479051 OR2T2Q6IF00 324 aa17.46■□□□□ 0.39
VARS-224ENST00000479051 DEGS2Q6QHC5 323 aa17.46■□□□□ 0.39
VARS-224ENST00000479051 BIVMQ86UB2 503 aa17.46■□□□□ 0.39
VARS-224ENST00000479051 CIARTQ8N365 385 aaPredicted RBP17.46■□□□□ 0.39
VARS-224ENST00000479051 GTF3AQ92664 365 aaKnown RBP17.46■□□□□ 0.39
VARS-224ENST00000479051 MROQ9BYG7 248 aa17.46■□□□□ 0.39
VARS-224ENST00000479051 MSL2Q9HCI7 577 aa17.46■□□□□ 0.39
VARS-224ENST00000479051 SMPD3Q9NY59 655 aaPredicted RBP17.46■□□□□ 0.39
VARS-224ENST00000479051 DNAJC27Q9NZQ0 273 aa17.46■□□□□ 0.39
VARS-224ENST00000479051 ZNF670-ZNF695F2Z2N8 137 aa17.45■□□□□ 0.38
VARS-224ENST00000479051 TBX1O43435 398 aa17.45■□□□□ 0.38
VARS-224ENST00000479051 XRCC2O43543 280 aa17.45■□□□□ 0.38
VARS-224ENST00000479051 MPZL2O60487 215 aa17.45■□□□□ 0.38
VARS-224ENST00000479051 NCR1O76036 304 aa17.45■□□□□ 0.38
VARS-224ENST00000479051 SLC2A1P11166 492 aa17.45■□□□□ 0.38
VARS-224ENST00000479051 ACHEP22303 614 aa17.45■□□□□ 0.38
VARS-224ENST00000479051 SNAI3Q3KNW1 292 aa17.45■□□□□ 0.38
VARS-224ENST00000479051 SLC35F2Q8IXU6 374 aa17.45■□□□□ 0.38
VARS-224ENST00000479051 OR5AS1Q8N127 324 aa17.45■□□□□ 0.38
VARS-224ENST00000479051 PACRGLQ8N7B6 248 aa17.45■□□□□ 0.38
VARS-224ENST00000479051 ZNF555Q8NEP9 628 aa17.45■□□□□ 0.38
VARS-224ENST00000479051 OR8G5Q8NG78 346 aa17.45■□□□□ 0.38
VARS-224ENST00000479051 OR52H1Q8NGJ2 320 aa17.45■□□□□ 0.38
VARS-224ENST00000479051 SPRYD4Q8WW59 207 aaPredicted RBP17.45■□□□□ 0.38
VARS-224ENST00000479051 OR10A2Q9H208 303 aa17.45■□□□□ 0.38
VARS-224ENST00000479051 DCLRE1BQ9H816 532 aa17.45■□□□□ 0.38
VARS-224ENST00000479051 CHODLQ9H9P2 273 aa17.45■□□□□ 0.38
VARS-224ENST00000479051 ADGRL4Q9HBW9 690 aa17.45■□□□□ 0.38
VARS-224ENST00000479051 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.45■□□□□ 0.38
VARS-224ENST00000479051 KLHDC2Q9Y2U9 406 aa17.45■□□□□ 0.38
VARS-224ENST00000479051 IQCF6A8MYZ5 107 aa17.44■□□□□ 0.38
VARS-224ENST00000479051 ZNF254O75437 659 aa17.44■□□□□ 0.38
VARS-224ENST00000479051 SBK2P0C263 348 aa17.44■□□□□ 0.38
VARS-224ENST00000479051 CFL1P23528 166 aaKnown RBP17.44■□□□□ 0.38
VARS-224ENST00000479051 NR4A2P43354 598 aa17.44■□□□□ 0.38
VARS-224ENST00000479051 HCCSP53701 268 aa17.44■□□□□ 0.38
VARS-224ENST00000479051 ZNF121P58317 390 aaPredicted RBP17.44■□□□□ 0.38
VARS-224ENST00000479051 SNRPGP62308 76 aaKnown RBP17.44■□□□□ 0.38
VARS-224ENST00000479051 CDK5R2Q13319 367 aa17.44■□□□□ 0.38
VARS-224ENST00000479051 TIGD6Q17RP2 521 aa17.44■□□□□ 0.38
VARS-224ENST00000479051 LRRC36Q1X8D7 754 aa17.44■□□□□ 0.38
VARS-224ENST00000479051 SLC25A30Q5SVS4 291 aa17.44■□□□□ 0.38
VARS-224ENST00000479051 LRRN1Q6UXK5 716 aa17.44■□□□□ 0.38
VARS-224ENST00000479051 USP51Q70EK9 711 aa17.44■□□□□ 0.38
VARS-224ENST00000479051 GALNT4Q8N4A0 578 aa17.44■□□□□ 0.38
VARS-224ENST00000479051 OR2Z1Q8NG97 314 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms