RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 CHMP2BQ9UQN3 213 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 PCYT1BQ9Y5K3 369 aaPredicted RBP3.45□□□□□ -1.86
CCDC171-207ENST00000478913 OR51B4Q9Y5P0 310 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 BZW2Q9Y6E2 419 aaKnown RBP3.45□□□□□ -1.86
CCDC171-207ENST00000478913 EXPH5Q8NEV8 1989 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 H0Y9J4 135 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 PGRMC1O00264 195 aaKnown RBP3.44□□□□□ -1.86
CCDC171-207ENST00000478913 NDC80O14777 642 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 RGS16O15492 202 aaPredicted RBP3.44□□□□□ -1.86
CCDC171-207ENST00000478913 LANCL1O43813 399 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 OR4F21O95013 312 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 ATP6V1G2O95670 118 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 RPSAP08865 295 aaKnown RBP3.44□□□□□ -1.86
CCDC171-207ENST00000478913 ICAM2P13598 275 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 TNNI3P19429 210 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 VDAC1P21796 283 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 UGT2B10P36537 528 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 HSPA9P38646 679 aaKnown RBP3.44□□□□□ -1.86
CCDC171-207ENST00000478913 MAGEA5P43359 124 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 ELP6Q0PNE2 266 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 PDZK1IP1Q13113 114 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 XRCC4Q13426 336 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 TMED1Q13445 227 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 LRRC23Q53EV4 343 aaPredicted RBP3.44□□□□□ -1.86
CCDC171-207ENST00000478913 TTC19Q6DKK2 380 aaPredicted RBP3.44□□□□□ -1.86
CCDC171-207ENST00000478913 KDELC1Q6UW63 502 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 SCARA5Q6ZMJ2 495 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 HSD17B13Q7Z5P4 300 aaPredicted RBP3.44□□□□□ -1.86
CCDC171-207ENST00000478913 TMEM179BQ7Z7N9 219 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 TMEM110Q86TL2 294 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 SLC26A11Q86WA9 606 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 DAW1Q8N136 415 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 ZFP62Q8NB50 900 aaPredicted RBP3.44□□□□□ -1.86
CCDC171-207ENST00000478913 CNIH3Q8TBE1 160 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 NANPQ8TBE9 248 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 M1APQ8TC57 530 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 CTNNBL1Q8WYA6 563 aaPredicted RBP3.44□□□□□ -1.86
CCDC171-207ENST00000478913 LZICQ8WZA0 190 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 FGGYQ96C11 551 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 HAVCR1Q96D42 359 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 CYYR1Q96J86 154 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 AKR1E2Q96JD6 320 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 SELENOSQ9BQE4 189 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 TMBIM4Q9HC24 238 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 ADAP2Q9NPF8 381 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 HRASLS2Q9NWW9 162 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 NKIRAS1Q9NYS0 192 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 OR1A1Q9P1Q5 309 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 KLF13Q9Y2Y9 288 aaPredicted RBP3.44□□□□□ -1.86
CCDC171-207ENST00000478913 IKBKGQ9Y6K9 419 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 AP1M2Q9Y6Q5 423 aa3.44□□□□□ -1.86
CCDC171-207ENST00000478913 DNAH2Q9P225 4427 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 CPAMD8Q8IZJ3 1885 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 GSAPA4D1B5 854 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 OR6C65A6NJZ3 312 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 OR52A4PA6NMU1 304 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 B4DSR2 109 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 SDHDO14521 159 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 MGRN1O60291 552 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 LYPLA1O75608 230 aaPredicted RBP3.43□□□□□ -1.86
CCDC171-207ENST00000478913 ACTL6AO96019 429 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 AGTP01019 485 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 PAEPP09466 180 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 PAX7P23759 505 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 CD79BP40259 229 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 STARP49675 285 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 KPNA2P52292 529 aaKnown RBP3.43□□□□□ -1.86
CCDC171-207ENST00000478913 EFNA4P52798 201 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 MRPS11P82912 194 aaKnown RBP3.43□□□□□ -1.86
CCDC171-207ENST00000478913 LRRC63Q05C16 580 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 ST3GAL3Q11203 375 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 ORC2Q13416 577 aaPredicted RBP3.43□□□□□ -1.86
CCDC171-207ENST00000478913 ATXN7L3Q14CW9 347 aaPredicted RBP3.43□□□□□ -1.86
CCDC171-207ENST00000478913 DEFB110Q30KQ9 67 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 CCDC14Q49A88 953 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 LINC01620Q4KN68 170 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 C2orf83Q53S99 150 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 TTMPQ5BVD1 217 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 SAXO2Q658L1 398 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 COX15Q7KZN9 410 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 CDKL3Q8IVW4 592 aaPredicted RBP3.43□□□□□ -1.86
CCDC171-207ENST00000478913 TEX29Q8N6K0 151 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 ANKRD49Q8WVL7 239 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 STMN2Q93045 179 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 TECTBQ96PL2 329 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 IL4I1Q96RQ9 567 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 PPDPFQ9H3Y8 114 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 ISG20L2Q9H9L3 353 aaKnown RBP3.43□□□□□ -1.86
CCDC171-207ENST00000478913 EDA2RQ9HAV5 297 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 ANAPC7Q9UJX3 599 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 B9D1Q9UPM9 204 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 C15orf41Q9Y2V0 281 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 SPACA6W5XKT8 324 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 VPS13DQ5THJ4 4388 aa3.43□□□□□ -1.86
CCDC171-207ENST00000478913 ZNF407Q9C0G0 2248 aa3.42□□□□□ -1.86
CCDC171-207ENST00000478913 PINLYPA6NC86 204 aa3.42□□□□□ -1.86
CCDC171-207ENST00000478913 BTNL10A8MVZ5 291 aa3.42□□□□□ -1.86
CCDC171-207ENST00000478913 B4DXG7 233 aa3.42□□□□□ -1.86
CCDC171-207ENST00000478913 ANKRD63C9JTQ0 380 aa3.42□□□□□ -1.86
CCDC171-207ENST00000478913 NPIPA7E9PJI5 369 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms