RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 OR2AE1Q8NHA4 323 aa8.77□□□□□ -1.01
HDAC6-222ENST00000478095 RNF133Q8WVZ7 376 aa8.77□□□□□ -1.01
HDAC6-222ENST00000478095 HRASLS5Q96KN8 279 aa8.77□□□□□ -1.01
HDAC6-222ENST00000478095 COG8Q96MW5 612 aa8.77□□□□□ -1.01
HDAC6-222ENST00000478095 ZNF582Q96NG8 517 aaPredicted RBP8.77□□□□□ -1.01
HDAC6-222ENST00000478095 CNN2Q99439 309 aaKnown RBP8.77□□□□□ -1.01
HDAC6-222ENST00000478095 KCNJ15Q99712 375 aa8.77□□□□□ -1.01
HDAC6-222ENST00000478095 C1QTNF5Q9BXJ0 243 aa8.77□□□□□ -1.01
HDAC6-222ENST00000478095 MS4A5Q9H3V2 200 aa8.77□□□□□ -1.01
HDAC6-222ENST00000478095 ADGRL4Q9HBW9 690 aa8.77□□□□□ -1.01
HDAC6-222ENST00000478095 MSL2Q9HCI7 577 aa8.77□□□□□ -1.01
HDAC6-222ENST00000478095 BRD7Q9NPI1 651 aa8.77□□□□□ -1.01
HDAC6-222ENST00000478095 SMPD3Q9NY59 655 aaPredicted RBP8.77□□□□□ -1.01
HDAC6-222ENST00000478095 GPR160Q9UJ42 338 aa8.77□□□□□ -1.01
HDAC6-222ENST00000478095 LAMP5Q9UJQ1 280 aa8.77□□□□□ -1.01
HDAC6-222ENST00000478095 PURGQ9UJV8 347 aaKnown RBP8.77□□□□□ -1.01
HDAC6-222ENST00000478095 COPS3Q9UNS2 423 aa8.77□□□□□ -1.01
HDAC6-222ENST00000478095 IGHV4-30-2A0A087WSY4 118 aa8.76□□□□□ -1.01
HDAC6-222ENST00000478095 PLSCR5A0PG75 271 aa8.76□□□□□ -1.01
HDAC6-222ENST00000478095 ZSCAN5BA6NJL1 495 aa8.76□□□□□ -1.01
HDAC6-222ENST00000478095 C17orf100A8MU93 164 aa8.76□□□□□ -1.01
HDAC6-222ENST00000478095 PRR32B1ATL7 298 aa8.76□□□□□ -1.01
HDAC6-222ENST00000478095 E9PQ18 207 aa8.76□□□□□ -1.01
HDAC6-222ENST00000478095 LYNX1G3V0Z9 82 aa8.76□□□□□ -1.01
HDAC6-222ENST00000478095 H3BSA7 217 aa8.76□□□□□ -1.01
HDAC6-222ENST00000478095 J3QW42 95 aa8.76□□□□□ -1.01
HDAC6-222ENST00000478095 DLGAP1O14490 977 aa8.76□□□□□ -1.01
HDAC6-222ENST00000478095 TBX1O43435 398 aa8.76□□□□□ -1.01
HDAC6-222ENST00000478095 ENTPD6O75354 484 aa8.76□□□□□ -1.01
HDAC6-222ENST00000478095 NCR1O76036 304 aa8.76□□□□□ -1.01
HDAC6-222ENST00000478095 HPXP02790 462 aa8.76□□□□□ -1.01
HDAC6-222ENST00000478095 ANXA2P07355 339 aaKnown RBP8.76□□□□□ -1.01
HDAC6-222ENST00000478095 LYNX1P0DP58 116 aa8.76□□□□□ -1.01
HDAC6-222ENST00000478095 DAOP14920 347 aa8.76□□□□□ -1.01
HDAC6-222ENST00000478095 ALOX5APP20292 161 aa8.76□□□□□ -1.01
HDAC6-222ENST00000478095 HTR1FP30939 366 aa8.76□□□□□ -1.01
HDAC6-222ENST00000478095 SLC15A1P46059 708 aa8.76□□□□□ -1.01
HDAC6-222ENST00000478095 ZNF81P51508 661 aa8.76□□□□□ -1.01
HDAC6-222ENST00000478095 GRB2P62993 217 aaKnown RBP8.76□□□□□ -1.01
HDAC6-222ENST00000478095 CCL8P80075 99 aa8.76□□□□□ -1.01
HDAC6-222ENST00000478095 GGTLC2Q14390 218 aa8.76□□□□□ -1.01
HDAC6-222ENST00000478095 TSTQ16762 297 aaKnown RBP8.76□□□□□ -1.01
HDAC6-222ENST00000478095 OR2T2Q6IF00 324 aa8.76□□□□□ -1.01
HDAC6-222ENST00000478095 CLEC2AQ6UVW9 174 aa8.76□□□□□ -1.01
HDAC6-222ENST00000478095 DRAM2Q6UX65 266 aa8.76□□□□□ -1.01
HDAC6-222ENST00000478095 KRT77Q7Z794 578 aa8.76□□□□□ -1.01
HDAC6-222ENST00000478095 SLC35F2Q8IXU6 374 aa8.76□□□□□ -1.01
HDAC6-222ENST00000478095 C1orf174Q8IYL3 243 aa8.76□□□□□ -1.01
HDAC6-222ENST00000478095 MAPK1IP1LQ8NDC0 245 aa8.76□□□□□ -1.01
HDAC6-222ENST00000478095 BHLHE23Q8NDY6 225 aa8.76□□□□□ -1.01
HDAC6-222ENST00000478095 OR5L1Q8NGL2 311 aa8.76□□□□□ -1.01
HDAC6-222ENST00000478095 NEU4Q8WWR8 484 aaPredicted RBP8.76□□□□□ -1.01
HDAC6-222ENST00000478095 TBX5Q99593 518 aa8.76□□□□□ -1.01
HDAC6-222ENST00000478095 YIPF3Q9GZM5 350 aa8.76□□□□□ -1.01
HDAC6-222ENST00000478095 FAM118AQ9NWS6 357 aa8.76□□□□□ -1.01
HDAC6-222ENST00000478095 NKX1-2Q9UD57 310 aaPredicted RBP8.76□□□□□ -1.01
HDAC6-222ENST00000478095 FBXO9Q9UK97 447 aaPredicted RBP8.76□□□□□ -1.01
HDAC6-222ENST00000478095 LOC100130705A0A1B0GUX0 176 aa8.75□□□□□ -1.01
HDAC6-222ENST00000478095 MAGEB4O15481 346 aaPredicted RBP8.75□□□□□ -1.01
HDAC6-222ENST00000478095 TPD52L2O43399 206 aaKnown RBP8.75□□□□□ -1.01
HDAC6-222ENST00000478095 CLIC3O95833 236 aa8.75□□□□□ -1.01
HDAC6-222ENST00000478095 IGHV1-46P01743 117 aa8.75□□□□□ -1.01
HDAC6-222ENST00000478095 MT-ND5P03915 603 aa8.75□□□□□ -1.01
HDAC6-222ENST00000478095 SBK2P0C263 348 aa8.75□□□□□ -1.01
HDAC6-222ENST00000478095 RAC2P15153 192 aa8.75□□□□□ -1.01
HDAC6-222ENST00000478095 KITLGP21583 273 aa8.75□□□□□ -1.01
HDAC6-222ENST00000478095 ATP6V1E1P36543 226 aa8.75□□□□□ -1.01
HDAC6-222ENST00000478095 ZNF121P58317 390 aaPredicted RBP8.75□□□□□ -1.01
HDAC6-222ENST00000478095 CXCR4P61073 352 aa8.75□□□□□ -1.01
HDAC6-222ENST00000478095 MALLQ13021 153 aa8.75□□□□□ -1.01
HDAC6-222ENST00000478095 HNRNPA0Q13151 305 aaKnown RBP8.75□□□□□ -1.01
HDAC6-222ENST00000478095 GK2Q14410 553 aaPredicted RBP8.75□□□□□ -1.01
HDAC6-222ENST00000478095 MOGQ16653 247 aa8.75□□□□□ -1.01
HDAC6-222ENST00000478095 GFOD2Q3B7J2 385 aa8.75□□□□□ -1.01
HDAC6-222ENST00000478095 GLYATL3Q5SZD4 288 aa8.75□□□□□ -1.01
HDAC6-222ENST00000478095 OGFRL1Q5TC84 451 aaPredicted RBP8.75□□□□□ -1.01
HDAC6-222ENST00000478095 FBXW12Q6X9E4 464 aa8.75□□□□□ -1.01
HDAC6-222ENST00000478095 Q6ZR03 302 aa8.75□□□□□ -1.01
HDAC6-222ENST00000478095 DNM1P46Q6ZS02 220 aa8.75□□□□□ -1.01
HDAC6-222ENST00000478095 USP51Q70EK9 711 aa8.75□□□□□ -1.01
HDAC6-222ENST00000478095 FAM57BQ71RH2 274 aa8.75□□□□□ -1.01
HDAC6-222ENST00000478095 MRPL21Q7Z2W9 205 aaKnown RBP8.75□□□□□ -1.01
HDAC6-222ENST00000478095 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.75□□□□□ -1.01
HDAC6-222ENST00000478095 LURAP1LQ8IV03 231 aa8.75□□□□□ -1.01
HDAC6-222ENST00000478095 ENTHD1Q8IYW4 607 aa8.75□□□□□ -1.01
HDAC6-222ENST00000478095 ZNF555Q8NEP9 628 aa8.75□□□□□ -1.01
HDAC6-222ENST00000478095 TRUB1Q8WWH5 349 aaKnown RBP8.75□□□□□ -1.01
HDAC6-222ENST00000478095 CYGBQ8WWM9 190 aa8.75□□□□□ -1.01
HDAC6-222ENST00000478095 FAM168AQ92567 244 aa8.75□□□□□ -1.01
HDAC6-222ENST00000478095 HAVCR1Q96D42 359 aa8.75□□□□□ -1.01
HDAC6-222ENST00000478095 RHNO1Q9BSD3 238 aa8.75□□□□□ -1.01
HDAC6-222ENST00000478095 DCLRE1BQ9H816 532 aa8.75□□□□□ -1.01
HDAC6-222ENST00000478095 DLL4Q9NR61 685 aa8.75□□□□□ -1.01
HDAC6-222ENST00000478095 WARS2Q9UGM6 360 aaKnown RBP8.75□□□□□ -1.01
HDAC6-222ENST00000478095 IKZF2Q9UKS7 526 aa8.75□□□□□ -1.01
HDAC6-222ENST00000478095 LRP12Q9Y561 859 aa8.75□□□□□ -1.01
HDAC6-222ENST00000478095 ZNF670-ZNF695F2Z2N8 137 aa8.74□□□□□ -1.01
HDAC6-222ENST00000478095 H0YHG0 523 aa8.74□□□□□ -1.01
HDAC6-222ENST00000478095 CASQ2O14958 399 aaPredicted RBP8.74□□□□□ -1.01
HDAC6-222ENST00000478095 WIPF1O43516 503 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms