RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 SLC22A25Q6T423 547 aa13.98□□□□□ -0.17
VHL-203ENST00000477538 RFPL4BQ6ZWI9 263 aa13.98□□□□□ -0.17
VHL-203ENST00000477538 FAM57BQ71RH2 274 aa13.98□□□□□ -0.17
VHL-203ENST00000477538 PRSS45Q7RTY3 260 aa13.98□□□□□ -0.17
VHL-203ENST00000477538 KLBQ86Z14 1044 aa13.98□□□□□ -0.17
VHL-203ENST00000477538 ZNF101Q8IZC7 436 aa13.98□□□□□ -0.17
VHL-203ENST00000477538 HAVCR2Q8TDQ0 301 aa13.98□□□□□ -0.17
VHL-203ENST00000477538 RNF166Q96A37 237 aaPredicted RBP13.98□□□□□ -0.17
VHL-203ENST00000477538 APOBEC3DQ96AK3 386 aaPredicted RBP13.98□□□□□ -0.17
VHL-203ENST00000477538 PGAM5Q96HS1 289 aa13.98□□□□□ -0.17
VHL-203ENST00000477538 OR5M11Q96RB7 305 aa13.98□□□□□ -0.17
VHL-203ENST00000477538 C1QTNF5Q9BXJ0 243 aa13.98□□□□□ -0.17
VHL-203ENST00000477538 SP140LQ9H930 580 aa13.98□□□□□ -0.17
VHL-203ENST00000477538 ACOT13Q9NPJ3 140 aa13.98□□□□□ -0.17
VHL-203ENST00000477538 TRIM36Q9NQ86 728 aa13.98□□□□□ -0.17
VHL-203ENST00000477538 TBCCD1Q9NVR7 557 aa13.98□□□□□ -0.17
VHL-203ENST00000477538 BABAM2Q9NXR7 383 aa13.98□□□□□ -0.17
VHL-203ENST00000477538 DSCAMO60469 2012 aa13.98□□□□□ -0.17
VHL-203ENST00000477538 MAGEA13PA6NCF6 341 aa13.97□□□□□ -0.17
VHL-203ENST00000477538 ACOD1A6NK06 481 aa13.97□□□□□ -0.17
VHL-203ENST00000477538 E9PI62 339 aa13.97□□□□□ -0.17
VHL-203ENST00000477538 TBX1O43435 398 aa13.97□□□□□ -0.17
VHL-203ENST00000477538 SMPD2O60906 423 aa13.97□□□□□ -0.17
VHL-203ENST00000477538 NGFP01138 241 aa13.97□□□□□ -0.17
VHL-203ENST00000477538 RPSAP08865 295 aaKnown RBP13.97□□□□□ -0.17
VHL-203ENST00000477538 COX6B1P14854 86 aa13.97□□□□□ -0.17
VHL-203ENST00000477538 PCMT1P22061 227 aa13.97□□□□□ -0.17
VHL-203ENST00000477538 NR4A1P22736 598 aa13.97□□□□□ -0.17
VHL-203ENST00000477538 LOXP28300 417 aaPredicted RBP13.97□□□□□ -0.17
VHL-203ENST00000477538 UCP2P55851 309 aa13.97□□□□□ -0.17
VHL-203ENST00000477538 MED22Q15528 200 aa13.97□□□□□ -0.17
VHL-203ENST00000477538 SNAI3Q3KNW1 292 aa13.97□□□□□ -0.17
VHL-203ENST00000477538 ADAM5Q6NVV9 412 aa13.97□□□□□ -0.17
VHL-203ENST00000477538 FDX2Q6P4F2 183 aa13.97□□□□□ -0.17
VHL-203ENST00000477538 UNQ6126/PRO20091Q6UXV3 157 aa13.97□□□□□ -0.17
VHL-203ENST00000477538 COLCA1Q6ZS62 124 aa13.97□□□□□ -0.17
VHL-203ENST00000477538 CATSPERDQ86XM0 798 aa13.97□□□□□ -0.17
VHL-203ENST00000477538 ABHD4Q8TB40 342 aa13.97□□□□□ -0.17
VHL-203ENST00000477538 PSMG3-AS1Q96PY0 264 aa13.97□□□□□ -0.17
VHL-203ENST00000477538 HS3ST6Q96QI5 342 aa13.97□□□□□ -0.17
VHL-203ENST00000477538 BCL2L14Q9BZR8 327 aa13.97□□□□□ -0.17
VHL-203ENST00000477538 MOB1AQ9H8S9 216 aa13.97□□□□□ -0.17
VHL-203ENST00000477538 OR52A1Q9UKL2 312 aa13.97□□□□□ -0.17
VHL-203ENST00000477538 RNF115Q9Y4L5 304 aa13.97□□□□□ -0.17
VHL-203ENST00000477538 SPEF1Q9Y4P9 236 aa13.97□□□□□ -0.17
VHL-203ENST00000477538 ARFGEF3Q5TH69 2177 aa13.96□□□□□ -0.17
VHL-203ENST00000477538 A6NNC1 897 aa13.96□□□□□ -0.17
VHL-203ENST00000477538 J3QW42 95 aa13.96□□□□□ -0.17
VHL-203ENST00000477538 GOSR1O95249 250 aa13.96□□□□□ -0.17
VHL-203ENST00000477538 LALBAP00709 142 aa13.96□□□□□ -0.17
VHL-203ENST00000477538 LCKP06239 509 aa13.96□□□□□ -0.17
VHL-203ENST00000477538 ATP6V1B1P15313 513 aa13.96□□□□□ -0.17
VHL-203ENST00000477538 ANOS1P23352 680 aa13.96□□□□□ -0.17
VHL-203ENST00000477538 RAD52P43351 418 aa13.96□□□□□ -0.17
VHL-203ENST00000477538 TGM4P49221 684 aa13.96□□□□□ -0.17
VHL-203ENST00000477538 GTF2A1P52655 376 aaPredicted RBP13.96□□□□□ -0.17
VHL-203ENST00000477538 TAS2R43P59537 309 aa13.96□□□□□ -0.17
VHL-203ENST00000477538 SNTB2Q13425 540 aaKnown RBP13.96□□□□□ -0.17
VHL-203ENST00000477538 ALKBH1Q13686 389 aaKnown RBP13.96□□□□□ -0.17
VHL-203ENST00000477538 DOC2BQ14184 412 aa13.96□□□□□ -0.17
VHL-203ENST00000477538 CCDC58Q4VC31 144 aa13.96□□□□□ -0.17
VHL-203ENST00000477538 WDR38Q5JTN6 314 aa13.96□□□□□ -0.17
VHL-203ENST00000477538 BCL2L15Q5TBC7 163 aa13.96□□□□□ -0.17
VHL-203ENST00000477538 XAF1Q6GPH4 301 aa13.96□□□□□ -0.17
VHL-203ENST00000477538 ZNF544Q6NX49 715 aa13.96□□□□□ -0.17
VHL-203ENST00000477538 ZNF367Q7RTV3 350 aa13.96□□□□□ -0.17
VHL-203ENST00000477538 KBTBD8Q8NFY9 601 aa13.96□□□□□ -0.17
VHL-203ENST00000477538 OR8B12Q8NGG6 310 aa13.96□□□□□ -0.17
VHL-203ENST00000477538 OR52H1Q8NGJ2 320 aa13.96□□□□□ -0.17
VHL-203ENST00000477538 OR2G2Q8NGZ5 317 aa13.96□□□□□ -0.17
VHL-203ENST00000477538 FCGR1BQ92637 280 aa13.96□□□□□ -0.17
VHL-203ENST00000477538 PBOV1Q9GZY1 135 aa13.96□□□□□ -0.17
VHL-203ENST00000477538 G6PC2Q9NQR9 355 aa13.96□□□□□ -0.17
VHL-203ENST00000477538 NUFIP1Q9UHK0 495 aaKnown RBP13.96□□□□□ -0.17
VHL-203ENST00000477538 SLC22A13Q9Y226 551 aa13.96□□□□□ -0.17
VHL-203ENST00000477538 STARD10Q9Y365 291 aa13.96□□□□□ -0.17
VHL-203ENST00000477538 CHD3Q12873 2000 aaKnown RBP13.96□□□□□ -0.17
VHL-203ENST00000477538 COL12A1Q99715 3063 aa13.96□□□□□ -0.18
VHL-203ENST00000477538 PTPN13Q12923 2485 aa13.96□□□□□ -0.18
VHL-203ENST00000477538 C5orf63A6NC05 138 aa13.95□□□□□ -0.18
VHL-203ENST00000477538 SHISA9B4DS77 424 aa13.95□□□□□ -0.18
VHL-203ENST00000477538 TTRP02766 147 aa13.95□□□□□ -0.18
VHL-203ENST00000477538 SMIM18P0DKX4 95 aa13.95□□□□□ -0.18
VHL-203ENST00000477538 KIR3DL2P43630 455 aa13.95□□□□□ -0.18
VHL-203ENST00000477538 NANOS3P60323 173 aaKnown RBP13.95□□□□□ -0.18
VHL-203ENST00000477538 PPP1CBP62140 327 aa13.95□□□□□ -0.18
VHL-203ENST00000477538 NKX6-1P78426 367 aaPredicted RBP13.95□□□□□ -0.18
VHL-203ENST00000477538 BDH1Q02338 343 aa13.95□□□□□ -0.18
VHL-203ENST00000477538 ACSM1Q08AH1 577 aa13.95□□□□□ -0.18
VHL-203ENST00000477538 CDK5R1Q15078 307 aa13.95□□□□□ -0.18
VHL-203ENST00000477538 KCTD8Q6ZWB6 473 aa13.95□□□□□ -0.18
VHL-203ENST00000477538 PRSS35Q8N3Z0 413 aa13.95□□□□□ -0.18
VHL-203ENST00000477538 NUP37Q8NFH4 326 aa13.95□□□□□ -0.18
VHL-203ENST00000477538 OR5L1Q8NGL2 311 aa13.95□□□□□ -0.18
VHL-203ENST00000477538 OR1J1Q8NGS3 322 aa13.95□□□□□ -0.18
VHL-203ENST00000477538 PPP1R14AQ96A00 147 aa13.95□□□□□ -0.18
VHL-203ENST00000477538 COG8Q96MW5 612 aa13.95□□□□□ -0.18
VHL-203ENST00000477538 TMEM204Q9BSN7 226 aa13.95□□□□□ -0.18
VHL-203ENST00000477538 OR10A2Q9H208 303 aa13.95□□□□□ -0.18
VHL-203ENST00000477538 FRRS1LQ9P0K9 344 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms