RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 EPPINO95925 133 aa13.13□□□□□ -0.31
HDAC6-220ENST00000477528 SERPINE2P07093 398 aa13.13□□□□□ -0.31
HDAC6-220ENST00000477528 GSTP1P09211 210 aaKnown RBP13.13□□□□□ -0.31
HDAC6-220ENST00000477528 GNB3P16520 340 aa13.13□□□□□ -0.31
HDAC6-220ENST00000477528 LINC00696Q6ZRV3 163 aa13.13□□□□□ -0.31
HDAC6-220ENST00000477528 EXD3Q8N9H8 876 aa13.13□□□□□ -0.31
HDAC6-220ENST00000477528 LIPHQ8WWY8 451 aa13.13□□□□□ -0.31
HDAC6-220ENST00000477528 THOC3Q96J01 351 aaKnown RBP13.13□□□□□ -0.31
HDAC6-220ENST00000477528 ZC3H10Q96K80 434 aaKnown RBP13.13□□□□□ -0.31
HDAC6-220ENST00000477528 FER1L6-AS2Q96M78 137 aa13.13□□□□□ -0.31
HDAC6-220ENST00000477528 UBL7Q96S82 380 aaPredicted RBP13.13□□□□□ -0.31
HDAC6-220ENST00000477528 PRELID1Q9Y255 219 aa13.13□□□□□ -0.31
HDAC6-220ENST00000477528 TIMM10BQ9Y5J6 103 aa13.13□□□□□ -0.31
HDAC6-220ENST00000477528 PCP4L1A6NKN8 68 aa13.12□□□□□ -0.31
HDAC6-220ENST00000477528 OR4C45A6NMZ5 311 aa13.12□□□□□ -0.31
HDAC6-220ENST00000477528 K7EPK0 472 aa13.12□□□□□ -0.31
HDAC6-220ENST00000477528 FADS1O60427 444 aa13.12□□□□□ -0.31
HDAC6-220ENST00000477528 ABHD16AO95870 558 aa13.12□□□□□ -0.31
HDAC6-220ENST00000477528 BGLAPP02818 100 aa13.12□□□□□ -0.31
HDAC6-220ENST00000477528 GUSBP08236 651 aa13.12□□□□□ -0.31
HDAC6-220ENST00000477528 ZNF728P0DKX0 622 aa13.12□□□□□ -0.31
HDAC6-220ENST00000477528 BCKDHBP21953 392 aa13.12□□□□□ -0.31
HDAC6-220ENST00000477528 CDAP32320 146 aa13.12□□□□□ -0.31
HDAC6-220ENST00000477528 MC2RQ01718 297 aa13.12□□□□□ -0.31
HDAC6-220ENST00000477528 TRA2AQ13595 282 aaKnown RBP eCLIP13.12□□□□□ -0.31
HDAC6-220ENST00000477528 SHBQ15464 509 aa13.12□□□□□ -0.31
HDAC6-220ENST00000477528 ZBTB37Q5TC79 503 aa13.12□□□□□ -0.31
HDAC6-220ENST00000477528 FAM71E2Q8N5Q1 922 aa13.12□□□□□ -0.31
HDAC6-220ENST00000477528 BOLLQ8N9W6 283 aaKnown RBP13.12□□□□□ -0.31
HDAC6-220ENST00000477528 ZNF721Q8TF20 911 aa13.12□□□□□ -0.31
HDAC6-220ENST00000477528 ZNF768Q9H5H4 540 aaKnown RBP13.12□□□□□ -0.31
HDAC6-220ENST00000477528 GPR173Q9NS66 373 aa13.12□□□□□ -0.31
HDAC6-220ENST00000477528 TMEM272A0A1B0GTI8 110 aa13.12□□□□□ -0.31
HDAC6-220ENST00000477528 VSTM5A8MXK1 200 aa13.12□□□□□ -0.31
HDAC6-220ENST00000477528 SEMA7AO75326 666 aa13.12□□□□□ -0.31
HDAC6-220ENST00000477528 LUMP51884 338 aaPredicted RBP13.12□□□□□ -0.31
HDAC6-220ENST00000477528 EXOSC2Q13868 293 aaKnown RBP13.12□□□□□ -0.31
HDAC6-220ENST00000477528 ADGRG3Q86Y34 549 aa13.12□□□□□ -0.31
HDAC6-220ENST00000477528 C9orf40Q8IXQ3 194 aa13.12□□□□□ -0.31
HDAC6-220ENST00000477528 PXT1Q8NFP0 134 aa13.12□□□□□ -0.31
HDAC6-220ENST00000477528 OR52B4Q8NGK2 314 aa13.12□□□□□ -0.31
HDAC6-220ENST00000477528 KCNJ15Q99712 375 aa13.12□□□□□ -0.31
HDAC6-220ENST00000477528 OR51B6Q9H340 312 aa13.12□□□□□ -0.31
HDAC6-220ENST00000477528 GHRLQ9UBU3 117 aa13.12□□□□□ -0.31
HDAC6-220ENST00000477528 A0A0B4J2A0 478 aa13.12□□□□□ -0.31
HDAC6-220ENST00000477528 ANKRD20A5PA0PJZ0 165 aa13.12□□□□□ -0.31
HDAC6-220ENST00000477528 RBP2P50120 134 aa13.12□□□□□ -0.31
HDAC6-220ENST00000477528 MGAT2Q10469 447 aa13.12□□□□□ -0.31
HDAC6-220ENST00000477528 ARHGEF39Q8N4T4 335 aa13.12□□□□□ -0.31
HDAC6-220ENST00000477528 DTWD2Q8NBA8 298 aa13.12□□□□□ -0.31
HDAC6-220ENST00000477528 VWCEQ96DN2 955 aa13.12□□□□□ -0.31
HDAC6-220ENST00000477528 PTDSS2Q9BVG9 487 aa13.12□□□□□ -0.31
HDAC6-220ENST00000477528 SHPKQ9UHJ6 478 aa13.12□□□□□ -0.31
HDAC6-220ENST00000477528 OR2F2O95006 317 aa13.11□□□□□ -0.31
HDAC6-220ENST00000477528 ZNF44P15621 663 aa13.11□□□□□ -0.31
HDAC6-220ENST00000477528 OR2F1Q13607 317 aa13.11□□□□□ -0.31
HDAC6-220ENST00000477528 C19orf48Q6RUI8 117 aa13.11□□□□□ -0.31
HDAC6-220ENST00000477528 BEND4Q6ZU67 534 aa13.11□□□□□ -0.31
HDAC6-220ENST00000477528 RAB11FIP2Q7L804 512 aa13.11□□□□□ -0.31
HDAC6-220ENST00000477528 FNDC1Q4ZHG4 1894 aaPredicted RBP13.11□□□□□ -0.31
HDAC6-220ENST00000477528 TMEM229AB2RXF0 380 aa13.11□□□□□ -0.31
HDAC6-220ENST00000477528 TPPPO94811 219 aa13.11□□□□□ -0.31
HDAC6-220ENST00000477528 HRH1P35367 487 aa13.11□□□□□ -0.31
HDAC6-220ENST00000477528 TEX261Q6UWH6 196 aa13.11□□□□□ -0.31
HDAC6-220ENST00000477528 PSMF1Q92530 271 aa13.11□□□□□ -0.31
HDAC6-220ENST00000477528 BCO1Q9HAY6 547 aa13.11□□□□□ -0.31
HDAC6-220ENST00000477528 NECAP2Q9NVZ3 263 aa13.11□□□□□ -0.31
HDAC6-220ENST00000477528 U3KQ87 197 aa13.11□□□□□ -0.31
HDAC6-220ENST00000477528 ARPC4-TTLL3A0A0A6YYG9 625 aa13.11□□□□□ -0.31
HDAC6-220ENST00000477528 KLF4O43474 513 aa13.11□□□□□ -0.31
HDAC6-220ENST00000477528 ATG12O94817 140 aa13.11□□□□□ -0.31
HDAC6-220ENST00000477528 PLA2G7Q13093 441 aa13.11□□□□□ -0.31
HDAC6-220ENST00000477528 OR51A2Q8NGJ7 313 aa13.11□□□□□ -0.31
HDAC6-220ENST00000477528 ZPLD1Q8TCW7 415 aa13.11□□□□□ -0.31
HDAC6-220ENST00000477528 UQCC2Q9BRT2 126 aa13.11□□□□□ -0.31
HDAC6-220ENST00000477528 SMIM3Q9BZL3 60 aa13.11□□□□□ -0.31
HDAC6-220ENST00000477528 MYLKQ15746 1914 aa13.11□□□□□ -0.31
HDAC6-220ENST00000477528 IGHV3-15A0A0B4J1V0 119 aa13.11□□□□□ -0.31
HDAC6-220ENST00000477528 MCRIP1C9JLW8 97 aa13.11□□□□□ -0.31
HDAC6-220ENST00000477528 SLC34A2O95436 690 aa13.11□□□□□ -0.31
HDAC6-220ENST00000477528 ETFDHQ16134 617 aa13.11□□□□□ -0.31
HDAC6-220ENST00000477528 GPX7Q96SL4 187 aaPredicted RBP13.11□□□□□ -0.31
HDAC6-220ENST00000477528 LOXL2Q9Y4K0 774 aa13.11□□□□□ -0.31
HDAC6-220ENST00000477528 OR5H14A6NHG9 310 aa13.1□□□□□ -0.31
HDAC6-220ENST00000477528 CXCL13O43927 109 aa13.1□□□□□ -0.31
HDAC6-220ENST00000477528 AQP8O94778 261 aa13.1□□□□□ -0.31
HDAC6-220ENST00000477528 RAC2P15153 192 aa13.1□□□□□ -0.31
HDAC6-220ENST00000477528 ZNF709Q8N972 641 aa13.1□□□□□ -0.31
HDAC6-220ENST00000477528 ASB10Q8WXI3 467 aa13.1□□□□□ -0.31
HDAC6-220ENST00000477528 ZNF845Q96IR2 970 aaPredicted RBP13.1□□□□□ -0.31
HDAC6-220ENST00000477528 MICU1Q9BPX6 476 aa13.1□□□□□ -0.31
HDAC6-220ENST00000477528 RAB33BQ9H082 229 aa13.1□□□□□ -0.31
HDAC6-220ENST00000477528 KLRC4-KLRK1H3BQV0 150 aa13.1□□□□□ -0.31
HDAC6-220ENST00000477528 RGS13O14921 159 aa13.1□□□□□ -0.31
HDAC6-220ENST00000477528 CNOT4O95628 575 aaKnown RBP13.1□□□□□ -0.31
HDAC6-220ENST00000477528 RGS19P49795 217 aa13.1□□□□□ -0.31
HDAC6-220ENST00000477528 IAH1Q2TAA2 248 aaPredicted RBP13.1□□□□□ -0.31
HDAC6-220ENST00000477528 PLXDC2Q6UX71 529 aa13.1□□□□□ -0.31
HDAC6-220ENST00000477528 TNFSF11O14788 317 aa13.1□□□□□ -0.31
HDAC6-220ENST00000477528 MPZL1O95297 269 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms