RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 VSX1Q9NZR4 365 aaPredicted RBP9.87□□□□□ -0.83
HDAC6-219ENST00000476625 FOXJ3Q9UPW0 622 aa9.87□□□□□ -0.83
HDAC6-219ENST00000476625 POLR1DQ9Y2S0 133 aa9.87□□□□□ -0.83
HDAC6-219ENST00000476625 POMT1Q9Y6A1 747 aa9.87□□□□□ -0.83
HDAC6-219ENST00000476625 A0A1B0GWJ7 208 aa9.86□□□□□ -0.83
HDAC6-219ENST00000476625 LRRC30A6NM36 301 aa9.86□□□□□ -0.83
HDAC6-219ENST00000476625 F5H5K5 113 aa9.86□□□□□ -0.83
HDAC6-219ENST00000476625 KHDRBS3O75525 346 aaKnown RBP9.86□□□□□ -0.83
HDAC6-219ENST00000476625 CD14P08571 375 aa9.86□□□□□ -0.83
HDAC6-219ENST00000476625 IRF2P14316 349 aa9.86□□□□□ -0.83
HDAC6-219ENST00000476625 KDELR2P33947 212 aa9.86□□□□□ -0.83
HDAC6-219ENST00000476625 CD200P41217 278 aa9.86□□□□□ -0.83
HDAC6-219ENST00000476625 RPS27P42677 84 aaKnown RBP9.86□□□□□ -0.83
HDAC6-219ENST00000476625 COX10Q12887 443 aa9.86□□□□□ -0.83
HDAC6-219ENST00000476625 PDCD1Q15116 288 aa9.86□□□□□ -0.83
HDAC6-219ENST00000476625 OR8B8Q15620 311 aa9.86□□□□□ -0.83
HDAC6-219ENST00000476625 FAM189A2Q15884 450 aa9.86□□□□□ -0.83
HDAC6-219ENST00000476625 ZBED5Q49AG3 693 aa9.86□□□□□ -0.83
HDAC6-219ENST00000476625 FBLN7Q53RD9 439 aa9.86□□□□□ -0.83
HDAC6-219ENST00000476625 BTN2A1Q7KYR7 527 aa9.86□□□□□ -0.83
HDAC6-219ENST00000476625 LDLRAD3Q86YD5 345 aa9.86□□□□□ -0.83
HDAC6-219ENST00000476625 GLB1L2Q8IW92 636 aa9.86□□□□□ -0.83
HDAC6-219ENST00000476625 OFCC1Q8IZS5 231 aa9.86□□□□□ -0.83
HDAC6-219ENST00000476625 ZSCAN4Q8NAM6 433 aaPredicted RBP9.86□□□□□ -0.83
HDAC6-219ENST00000476625 OR2AE1Q8NHA4 323 aa9.86□□□□□ -0.83
HDAC6-219ENST00000476625 TBC1D15Q8TC07 691 aa9.86□□□□□ -0.83
HDAC6-219ENST00000476625 FNDC8Q8TC99 324 aa9.86□□□□□ -0.83
HDAC6-219ENST00000476625 Q8TCH9 128 aa9.86□□□□□ -0.83
HDAC6-219ENST00000476625 APOBEC3DQ96AK3 386 aaPredicted RBP9.86□□□□□ -0.83
HDAC6-219ENST00000476625 POLR2J2Q9GZM3 115 aaKnown RBP9.86□□□□□ -0.83
HDAC6-219ENST00000476625 POLR2J3Q9H1A7 115 aaKnown RBP9.86□□□□□ -0.83
HDAC6-219ENST00000476625 PPP1R3EQ9H7J1 279 aa9.86□□□□□ -0.83
HDAC6-219ENST00000476625 IER3IP1Q9Y5U9 82 aa9.86□□□□□ -0.83
HDAC6-219ENST00000476625 IFNL4K9M1U5 179 aa9.85□□□□□ -0.83
HDAC6-219ENST00000476625 XKRYO14609 159 aa9.85□□□□□ -0.83
HDAC6-219ENST00000476625 MRASO14807 208 aa9.85□□□□□ -0.83
HDAC6-219ENST00000476625 CSF1P09603 554 aa9.85□□□□□ -0.83
HDAC6-219ENST00000476625 ACSM4P0C7M7 580 aa9.85□□□□□ -0.83
HDAC6-219ENST00000476625 SELLP14151 372 aa9.85□□□□□ -0.83
HDAC6-219ENST00000476625 TUBG1P23258 451 aa9.85□□□□□ -0.83
HDAC6-219ENST00000476625 GATA4P43694 442 aa9.85□□□□□ -0.83
HDAC6-219ENST00000476625 HIST1H3AP68431 136 aa9.85□□□□□ -0.83
HDAC6-219ENST00000476625 TRAM2Q15035 370 aa9.85□□□□□ -0.83
HDAC6-219ENST00000476625 OR8G1Q15617 311 aa9.85□□□□□ -0.83
HDAC6-219ENST00000476625 SNAI3Q3KNW1 292 aa9.85□□□□□ -0.83
HDAC6-219ENST00000476625 KRTAP27-1Q3LI81 207 aa9.85□□□□□ -0.83
HDAC6-219ENST00000476625 HIST2H3PS2Q5TEC6 136 aa9.85□□□□□ -0.83
HDAC6-219ENST00000476625 METTL11BQ5VVY1 283 aa9.85□□□□□ -0.83
HDAC6-219ENST00000476625 ZNF730Q6ZMV8 503 aa9.85□□□□□ -0.83
HDAC6-219ENST00000476625 HIST2H3AQ71DI3 136 aa9.85□□□□□ -0.83
HDAC6-219ENST00000476625 FAM90A1Q86YD7 464 aa9.85□□□□□ -0.83
HDAC6-219ENST00000476625 C1orf87Q8N0U7 546 aa9.85□□□□□ -0.83
HDAC6-219ENST00000476625 LNX2Q8N448 690 aa9.85□□□□□ -0.83
HDAC6-219ENST00000476625 OR11L1Q8NGX0 322 aa9.85□□□□□ -0.83
HDAC6-219ENST00000476625 C17orf50Q8WW18 174 aa9.85□□□□□ -0.83
HDAC6-219ENST00000476625 ST8SIA4Q92187 359 aa9.85□□□□□ -0.83
HDAC6-219ENST00000476625 ADAT1Q9BUB4 502 aaKnown RBP9.85□□□□□ -0.83
HDAC6-219ENST00000476625 FNDC11Q9BVV2 318 aa9.85□□□□□ -0.83
HDAC6-219ENST00000476625 RABEP2Q9H5N1 569 aa9.85□□□□□ -0.83
HDAC6-219ENST00000476625 SIRT7Q9NRC8 400 aa9.85□□□□□ -0.83
HDAC6-219ENST00000476625 TUBG2Q9NRH3 451 aa9.85□□□□□ -0.83
HDAC6-219ENST00000476625 C1orf123Q9NWV4 160 aa9.85□□□□□ -0.83
HDAC6-219ENST00000476625 ERVK-18Q9QC07 812 aa9.85□□□□□ -0.83
HDAC6-219ENST00000476625 IGLV1-36A0A0B4J1U3 117 aa9.84□□□□□ -0.83
HDAC6-219ENST00000476625 A0A0G2JND7 137 aa9.84□□□□□ -0.83
HDAC6-219ENST00000476625 FAM220BPB1ANY3 271 aa9.84□□□□□ -0.83
HDAC6-219ENST00000476625 LGALS8O00214 317 aa9.84□□□□□ -0.83
HDAC6-219ENST00000476625 DVL1O14640 695 aa9.84□□□□□ -0.83
HDAC6-219ENST00000476625 PPP1R3DO95685 299 aa9.84□□□□□ -0.83
HDAC6-219ENST00000476625 ZNF682O95780 498 aa9.84□□□□□ -0.83
HDAC6-219ENST00000476625 GRPP07492 148 aa9.84□□□□□ -0.83
HDAC6-219ENST00000476625 SDHAP31040 664 aa9.84□□□□□ -0.83
HDAC6-219ENST00000476625 RGS6P49758 472 aa9.84□□□□□ -0.83
HDAC6-219ENST00000476625 LSM6P62312 80 aaKnown RBP9.84□□□□□ -0.83
HDAC6-219ENST00000476625 SELENOWP63302 87 aa9.84□□□□□ -0.83
HDAC6-219ENST00000476625 CYLC2Q14093 348 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-219ENST00000476625 SAMD5Q5TGI4 173 aa9.84□□□□□ -0.83
HDAC6-219ENST00000476625 DHRS7BQ6IAN0 325 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-219ENST00000476625 SLC35E4Q6ICL7 350 aa9.84□□□□□ -0.83
HDAC6-219ENST00000476625 LYPD4Q6UWN0 246 aa9.84□□□□□ -0.83
HDAC6-219ENST00000476625 COLCA1Q6ZS62 124 aa9.84□□□□□ -0.83
HDAC6-219ENST00000476625 MBOAT2Q6ZWT7 520 aa9.84□□□□□ -0.83
HDAC6-219ENST00000476625 WDR86Q86TI4 376 aa9.84□□□□□ -0.83
HDAC6-219ENST00000476625 GCSAMQ8N6F7 178 aa9.84□□□□□ -0.83
HDAC6-219ENST00000476625 FAM216BQ8N7L0 139 aa9.84□□□□□ -0.83
HDAC6-219ENST00000476625 OR5L1Q8NGL2 311 aa9.84□□□□□ -0.83
HDAC6-219ENST00000476625 ACOT11Q8WXI4 607 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-219ENST00000476625 COG8Q96MW5 612 aa9.84□□□□□ -0.83
HDAC6-219ENST00000476625 COQ7Q99807 217 aa9.84□□□□□ -0.83
HDAC6-219ENST00000476625 HCAR1Q9BXC0 346 aa9.84□□□□□ -0.83
HDAC6-219ENST00000476625 TRIM15Q9C019 465 aa9.84□□□□□ -0.83
HDAC6-219ENST00000476625 NMNAT1Q9HAN9 279 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-219ENST00000476625 SRA1Q9HD15 236 aaKnown RBP9.84□□□□□ -0.83
HDAC6-219ENST00000476625 PNRC2Q9NPJ4 139 aaKnown RBP9.84□□□□□ -0.83
HDAC6-219ENST00000476625 ZNRD1Q9P1U0 126 aa9.84□□□□□ -0.83
HDAC6-219ENST00000476625 ONECUT1Q9UBC0 465 aa9.84□□□□□ -0.83
HDAC6-219ENST00000476625 RNF7Q9UBF6 113 aa9.84□□□□□ -0.83
HDAC6-219ENST00000476625 SIGLEC7Q9Y286 467 aa9.84□□□□□ -0.83
HDAC6-219ENST00000476625 ZNF281Q9Y2X9 895 aa9.84□□□□□ -0.83
HDAC6-219ENST00000476625 RYR3Q15413 4870 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms