RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 C1orf87Q8N0U7 546 aa10.91□□□□□ -0.66
MRPL55-228ENST00000476267 OR8B3Q8NGG8 313 aa10.91□□□□□ -0.66
MRPL55-228ENST00000476267 OR10S1Q8NGN2 331 aa10.91□□□□□ -0.66
MRPL55-228ENST00000476267 ERGIC1Q969X5 290 aa10.91□□□□□ -0.66
MRPL55-228ENST00000476267 TMIGD2Q96BF3 282 aa10.91□□□□□ -0.66
MRPL55-228ENST00000476267 PLEKHA8Q96JA3 519 aa10.91□□□□□ -0.66
MRPL55-228ENST00000476267 OR8B2Q96RD0 313 aa10.91□□□□□ -0.66
MRPL55-228ENST00000476267 TMEM100Q9NV29 134 aa10.91□□□□□ -0.66
MRPL55-228ENST00000476267 CTSZQ9UBR2 303 aa10.91□□□□□ -0.66
MRPL55-228ENST00000476267 RPS6KA6Q9UK32 745 aa10.91□□□□□ -0.66
MRPL55-228ENST00000476267 LRRC30A6NM36 301 aa10.9□□□□□ -0.66
MRPL55-228ENST00000476267 SRRM5B3KS81 715 aa10.9□□□□□ -0.66
MRPL55-228ENST00000476267 FAM20BO75063 409 aa10.9□□□□□ -0.66
MRPL55-228ENST00000476267 FCN3O75636 299 aa10.9□□□□□ -0.66
MRPL55-228ENST00000476267 DIRAS1O95057 198 aa10.9□□□□□ -0.66
MRPL55-228ENST00000476267 MMP9P14780 707 aa10.9□□□□□ -0.66
MRPL55-228ENST00000476267 MDH1P40925 334 aaKnown RBP10.9□□□□□ -0.66
MRPL55-228ENST00000476267 FGF12P61328 243 aa10.9□□□□□ -0.66
MRPL55-228ENST00000476267 RELBQ01201 579 aa10.9□□□□□ -0.66
MRPL55-228ENST00000476267 MPPED2Q15777 294 aa10.9□□□□□ -0.66
MRPL55-228ENST00000476267 RFX4Q33E94 735 aa10.9□□□□□ -0.66
MRPL55-228ENST00000476267 FGD3Q5JSP0 725 aa10.9□□□□□ -0.66
MRPL55-228ENST00000476267 DNM1P34Q6PK57 102 aa10.9□□□□□ -0.66
MRPL55-228ENST00000476267 Q6YL49 198 aa10.9□□□□□ -0.66
MRPL55-228ENST00000476267 NLRC3Q7RTR2 1065 aa10.9□□□□□ -0.66
MRPL55-228ENST00000476267 WFDC12Q8WWY7 111 aa10.9□□□□□ -0.66
MRPL55-228ENST00000476267 FAM162AQ96A26 154 aa10.9□□□□□ -0.66
MRPL55-228ENST00000476267 ERMAPQ96PL5 475 aaPredicted RBP10.9□□□□□ -0.66
MRPL55-228ENST00000476267 NMNAT3Q96T66 252 aa10.9□□□□□ -0.66
MRPL55-228ENST00000476267 ATF6BQ99941 703 aa10.9□□□□□ -0.66
MRPL55-228ENST00000476267 OR52D1Q9H346 318 aa10.9□□□□□ -0.66
MRPL55-228ENST00000476267 DCAF13Q9NV06 445 aaKnown RBP10.9□□□□□ -0.66
MRPL55-228ENST00000476267 CLN8Q9UBY8 286 aa10.9□□□□□ -0.66
MRPL55-228ENST00000476267 CYB5R1Q9UHQ9 305 aa10.9□□□□□ -0.66
MRPL55-228ENST00000476267 POLR1DQ9Y2S0 133 aa10.9□□□□□ -0.66
MRPL55-228ENST00000476267 VWFP04275 2813 aa10.9□□□□□ -0.67
MRPL55-228ENST00000476267 OR6C68A6NDL8 312 aa10.89□□□□□ -0.67
MRPL55-228ENST00000476267 PSKH1P11801 424 aa10.89□□□□□ -0.67
MRPL55-228ENST00000476267 HIST1H1CP16403 213 aaKnown RBP10.89□□□□□ -0.67
MRPL55-228ENST00000476267 OMGP23515 440 aa10.89□□□□□ -0.67
MRPL55-228ENST00000476267 BPIFB3P59826 476 aa10.89□□□□□ -0.67
MRPL55-228ENST00000476267 TRAP1Q12931 704 aaKnown RBP10.89□□□□□ -0.67
MRPL55-228ENST00000476267 ECH1Q13011 328 aa10.89□□□□□ -0.67
MRPL55-228ENST00000476267 PRAMEF6Q5VXH4 476 aa10.89□□□□□ -0.67
MRPL55-228ENST00000476267 SPATC1Q76KD6 591 aa10.89□□□□□ -0.67
MRPL55-228ENST00000476267 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.89□□□□□ -0.67
MRPL55-228ENST00000476267 LINC00346Q8IVM7 164 aa10.89□□□□□ -0.67
MRPL55-228ENST00000476267 C19orf18Q8NEA5 215 aa10.89□□□□□ -0.67
MRPL55-228ENST00000476267 FANK1Q8TC84 345 aa10.89□□□□□ -0.67
MRPL55-228ENST00000476267 MAP6Q96JE9 813 aa10.89□□□□□ -0.67
MRPL55-228ENST00000476267 KCTD14Q9BQ13 255 aaPredicted RBP10.89□□□□□ -0.67
MRPL55-228ENST00000476267 HCAR1Q9BXC0 346 aa10.89□□□□□ -0.67
MRPL55-228ENST00000476267 EFCAB1Q9HAE3 211 aa10.89□□□□□ -0.67
MRPL55-228ENST00000476267 SRA1Q9HD15 236 aaKnown RBP10.89□□□□□ -0.67
MRPL55-228ENST00000476267 ARGLU1Q9NWB6 273 aaPredicted RBP10.89□□□□□ -0.67
MRPL55-228ENST00000476267 MRPL22Q9NWU5 206 aaKnown RBP10.89□□□□□ -0.67
MRPL55-228ENST00000476267 TMCC3Q9ULS5 477 aa10.89□□□□□ -0.67
MRPL55-228ENST00000476267 AURKCQ9UQB9 309 aa10.89□□□□□ -0.67
MRPL55-228ENST00000476267 FAM181BA6NEQ2 426 aa10.88□□□□□ -0.67
MRPL55-228ENST00000476267 F5H5K5 113 aa10.88□□□□□ -0.67
MRPL55-228ENST00000476267 ENSAO43768 121 aaKnown RBP10.88□□□□□ -0.67
MRPL55-228ENST00000476267 SFTPBP07988 381 aa10.88□□□□□ -0.67
MRPL55-228ENST00000476267 OTX1P32242 354 aaPredicted RBP10.88□□□□□ -0.67
MRPL55-228ENST00000476267 CFHR2P36980 270 aa10.88□□□□□ -0.67
MRPL55-228ENST00000476267 NPY4RP50391 375 aa10.88□□□□□ -0.67
MRPL55-228ENST00000476267 NUDT2P50583 147 aa10.88□□□□□ -0.67
MRPL55-228ENST00000476267 DEFA6Q01524 100 aa10.88□□□□□ -0.67
MRPL55-228ENST00000476267 SRSF4Q08170 494 aaKnown RBP10.88□□□□□ -0.67
MRPL55-228ENST00000476267 RUSC1-AS1Q66K80 236 aa10.88□□□□□ -0.67
MRPL55-228ENST00000476267 GLYATQ6IB77 296 aa10.88□□□□□ -0.67
MRPL55-228ENST00000476267 TMEM86BQ8N661 226 aa10.88□□□□□ -0.67
MRPL55-228ENST00000476267 OR4K13Q8NH42 304 aa10.88□□□□□ -0.67
MRPL55-228ENST00000476267 OR52J3Q8NH60 311 aa10.88□□□□□ -0.67
MRPL55-228ENST00000476267 SLCO4A1Q96BD0 722 aa10.88□□□□□ -0.67
MRPL55-228ENST00000476267 TBX15Q96SF7 602 aa10.88□□□□□ -0.67
MRPL55-228ENST00000476267 DDOQ99489 341 aa10.88□□□□□ -0.67
MRPL55-228ENST00000476267 FN3KQ9H479 309 aa10.88□□□□□ -0.67
MRPL55-228ENST00000476267 SMURF1Q9HCE7 757 aa10.88□□□□□ -0.67
MRPL55-228ENST00000476267 NOX4Q9NPH5 578 aa10.88□□□□□ -0.67
MRPL55-228ENST00000476267 RPRD1BQ9NQG5 326 aaKnown RBP10.88□□□□□ -0.67
MRPL55-228ENST00000476267 C1RLQ9NZP8 487 aa10.88□□□□□ -0.67
MRPL55-228ENST00000476267 PDP1Q9P0J1 537 aaPredicted RBP10.88□□□□□ -0.67
MRPL55-228ENST00000476267 SAMD4AQ9UPU9 718 aaKnown RBP10.88□□□□□ -0.67
MRPL55-228ENST00000476267 A0A1B0GUS0 222 aa10.87□□□□□ -0.67
MRPL55-228ENST00000476267 C5orf63A6NC05 138 aa10.87□□□□□ -0.67
MRPL55-228ENST00000476267 ZNF879B4DU55 563 aa10.87□□□□□ -0.67
MRPL55-228ENST00000476267 NDUFAB1O14561 156 aa10.87□□□□□ -0.67
MRPL55-228ENST00000476267 NDUFA7O95182 113 aa10.87□□□□□ -0.67
MRPL55-228ENST00000476267 MELTFP08582 738 aa10.87□□□□□ -0.67
MRPL55-228ENST00000476267 SLC6A6P31641 620 aa10.87□□□□□ -0.67
MRPL55-228ENST00000476267 GSSP48637 474 aa10.87□□□□□ -0.67
MRPL55-228ENST00000476267 CENPAP49450 140 aa10.87□□□□□ -0.67
MRPL55-228ENST00000476267 PSME3P61289 254 aa10.87□□□□□ -0.67
MRPL55-228ENST00000476267 SNAI3Q3KNW1 292 aa10.87□□□□□ -0.67
MRPL55-228ENST00000476267 ZNF362Q5T0B9 420 aaPredicted RBP10.87□□□□□ -0.67
MRPL55-228ENST00000476267 GPR157Q5UAW9 335 aa10.87□□□□□ -0.67
MRPL55-228ENST00000476267 PGAP1Q75T13 922 aa10.87□□□□□ -0.67
MRPL55-228ENST00000476267 PLPP7Q8NBV4 271 aa10.87□□□□□ -0.67
MRPL55-228ENST00000476267 SDR9C7Q8NEX9 313 aa10.87□□□□□ -0.67
MRPL55-228ENST00000476267 ZNRF4Q8WWF5 429 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms