RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 CD8BP10966 210 aa15.81■□□□□ 0.12
ATG4B-217ENST00000475693 RSPO1Q2MKA7 263 aaPredicted RBP15.81■□□□□ 0.12
ATG4B-217ENST00000475693 FAM220AQ7Z4H9 259 aa15.81■□□□□ 0.12
ATG4B-217ENST00000475693 TRIM63Q969Q1 353 aa15.81■□□□□ 0.12
ATG4B-217ENST00000475693 RNF170Q96K19 258 aa15.81■□□□□ 0.12
ATG4B-217ENST00000475693 PGLYRP3Q96LB9 341 aa15.81■□□□□ 0.12
ATG4B-217ENST00000475693 OSGIN2Q9Y236 505 aa15.81■□□□□ 0.12
ATG4B-217ENST00000475693 CCL2P13500 99 aa15.8■□□□□ 0.12
ATG4B-217ENST00000475693 NPR2P20594 1047 aa15.8■□□□□ 0.12
ATG4B-217ENST00000475693 HLA-DMAP28067 261 aa15.8■□□□□ 0.12
ATG4B-217ENST00000475693 PSG4Q00888 419 aa15.8■□□□□ 0.12
ATG4B-217ENST00000475693 ROM1Q03395 351 aa15.8■□□□□ 0.12
ATG4B-217ENST00000475693 SFRP5Q5T4F7 317 aa15.8■□□□□ 0.12
ATG4B-217ENST00000475693 FAM27D1Q5T7N8 215 aa15.8■□□□□ 0.12
ATG4B-217ENST00000475693 DDI2Q5TDH0 399 aa15.8■□□□□ 0.12
ATG4B-217ENST00000475693 DMKNQ6E0U4 476 aaPredicted RBP15.8■□□□□ 0.12
ATG4B-217ENST00000475693 KCTD18Q6PI47 426 aaPredicted RBP15.8■□□□□ 0.12
ATG4B-217ENST00000475693 OR6K3Q8NGY3 331 aa15.8■□□□□ 0.12
ATG4B-217ENST00000475693 OR10AC1Q8NH08 325 aa15.8■□□□□ 0.12
ATG4B-217ENST00000475693 ASB17Q8WXJ9 295 aa15.8■□□□□ 0.12
ATG4B-217ENST00000475693 AP3S1Q92572 193 aa15.8■□□□□ 0.12
ATG4B-217ENST00000475693 PLSCR4Q9NRQ2 329 aa15.8■□□□□ 0.12
ATG4B-217ENST00000475693 TXNL4BQ9NX01 149 aaKnown RBP15.8■□□□□ 0.12
ATG4B-217ENST00000475693 PLEK2Q9NYT0 353 aa15.8■□□□□ 0.12
ATG4B-217ENST00000475693 E9PLN8 166 aa15.8■□□□□ 0.12
ATG4B-217ENST00000475693 ZFPL1O95159 310 aa15.8■□□□□ 0.12
ATG4B-217ENST00000475693 SFTPCP11686 197 aa15.8■□□□□ 0.12
ATG4B-217ENST00000475693 CD79AP11912 226 aa15.8■□□□□ 0.12
ATG4B-217ENST00000475693 PTBP1P26599 531 aaKnown RBP eCLIP15.8■□□□□ 0.12
ATG4B-217ENST00000475693 CEACAM8P31997 349 aaPredicted RBP15.8■□□□□ 0.12
ATG4B-217ENST00000475693 TIMP3P35625 211 aa15.8■□□□□ 0.12
ATG4B-217ENST00000475693 KIR3DL2P43630 455 aa15.8■□□□□ 0.12
ATG4B-217ENST00000475693 ACSM1Q08AH1 577 aa15.8■□□□□ 0.12
ATG4B-217ENST00000475693 CDK5R1Q15078 307 aa15.8■□□□□ 0.12
ATG4B-217ENST00000475693 ZMAT1Q5H9K5 638 aa15.8■□□□□ 0.12
ATG4B-217ENST00000475693 NOXA1Q86UR1 476 aa15.8■□□□□ 0.12
ATG4B-217ENST00000475693 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.8■□□□□ 0.12
ATG4B-217ENST00000475693 MNTQ99583 582 aa15.8■□□□□ 0.12
ATG4B-217ENST00000475693 PPIL3Q9H2H8 161 aaKnown RBP15.8■□□□□ 0.12
ATG4B-217ENST00000475693 PROCRQ9UNN8 238 aa15.8■□□□□ 0.12
ATG4B-217ENST00000475693 SMIM30A4D0T7 59 aa15.79■□□□□ 0.12
ATG4B-217ENST00000475693 F5H5K5 113 aa15.79■□□□□ 0.12
ATG4B-217ENST00000475693 ALX3O95076 343 aa15.79■□□□□ 0.12
ATG4B-217ENST00000475693 HLA-DQB1P01920 261 aa15.79■□□□□ 0.12
ATG4B-217ENST00000475693 PRB1P04280 392 aa15.79■□□□□ 0.12
ATG4B-217ENST00000475693 MPGP29372 298 aa15.79■□□□□ 0.12
ATG4B-217ENST00000475693 GDI2P50395 445 aaKnown RBP15.79■□□□□ 0.12
ATG4B-217ENST00000475693 RIDAP52758 137 aaKnown RBP15.79■□□□□ 0.12
ATG4B-217ENST00000475693 WDR38Q5JTN6 314 aa15.79■□□□□ 0.12
ATG4B-217ENST00000475693 ZNF474Q6S9Z5 364 aaPredicted RBP15.79■□□□□ 0.12
ATG4B-217ENST00000475693 FAM131AQ6UXB0 335 aa15.79■□□□□ 0.12
ATG4B-217ENST00000475693 CPEB3Q8NE35 698 aaKnown RBP15.79■□□□□ 0.12
ATG4B-217ENST00000475693 OR51A4Q8NGJ6 313 aa15.79■□□□□ 0.12
ATG4B-217ENST00000475693 OR2G2Q8NGZ5 317 aa15.79■□□□□ 0.12
ATG4B-217ENST00000475693 ZC3HAV1LQ96H79 300 aaKnown RBP15.79■□□□□ 0.12
ATG4B-217ENST00000475693 C1QTNF6Q9BXI9 259 aa15.79■□□□□ 0.12
ATG4B-217ENST00000475693 MIXL1Q9H2W2 232 aa15.79■□□□□ 0.12
ATG4B-217ENST00000475693 PLEKHB1Q9UF11 243 aaPredicted RBP15.79■□□□□ 0.12
ATG4B-217ENST00000475693 FABP12A6NFH5 140 aa15.79■□□□□ 0.12
ATG4B-217ENST00000475693 PHYHO14832 338 aa15.79■□□□□ 0.12
ATG4B-217ENST00000475693 OGG1O15527 345 aa15.79■□□□□ 0.12
ATG4B-217ENST00000475693 CDRT1O95170 752 aa15.79■□□□□ 0.12
ATG4B-217ENST00000475693 CST2P09228 141 aa15.79■□□□□ 0.12
ATG4B-217ENST00000475693 TACSTD2P09758 323 aa15.79■□□□□ 0.12
ATG4B-217ENST00000475693 CSF3P09919 207 aa15.79■□□□□ 0.12
ATG4B-217ENST00000475693 PTGER4P35408 488 aa15.79■□□□□ 0.12
ATG4B-217ENST00000475693 TAF13Q15543 124 aa15.79■□□□□ 0.12
ATG4B-217ENST00000475693 YIF1BQ5BJH7 314 aa15.79■□□□□ 0.12
ATG4B-217ENST00000475693 C22orf42Q6IC83 251 aa15.79■□□□□ 0.12
ATG4B-217ENST00000475693 METAP1DQ6UB28 335 aaPredicted RBP15.79■□□□□ 0.12
ATG4B-217ENST00000475693 TMEM91Q6ZNR0 172 aa15.79■□□□□ 0.12
ATG4B-217ENST00000475693 CXorf67Q86X51 503 aaPredicted RBP15.79■□□□□ 0.12
ATG4B-217ENST00000475693 TCTE3Q8IZS6 198 aa15.79■□□□□ 0.12
ATG4B-217ENST00000475693 GJC3Q8NFK1 279 aa15.79■□□□□ 0.12
ATG4B-217ENST00000475693 OR1K1Q8NGR3 316 aa15.79■□□□□ 0.12
ATG4B-217ENST00000475693 RGP1Q92546 391 aaPredicted RBP15.79■□□□□ 0.12
ATG4B-217ENST00000475693 BBC3Q96PG8 261 aaPredicted RBP15.79■□□□□ 0.12
ATG4B-217ENST00000475693 TMEM246Q9BRR3 403 aa15.79■□□□□ 0.12
ATG4B-217ENST00000475693 WNT5BQ9H1J7 359 aa15.79■□□□□ 0.12
ATG4B-217ENST00000475693 RNF121Q9H920 327 aa15.79■□□□□ 0.12
ATG4B-217ENST00000475693 ZNF319Q9P2F9 582 aa15.79■□□□□ 0.12
ATG4B-217ENST00000475693 TMEM269A0A1B0GVZ9 245 aa15.78■□□□□ 0.12
ATG4B-217ENST00000475693 ANKRD61A6NGH8 418 aa15.78■□□□□ 0.12
ATG4B-217ENST00000475693 OR6C65A6NJZ3 312 aa15.78■□□□□ 0.12
ATG4B-217ENST00000475693 PLPP2O43688 288 aa15.78■□□□□ 0.12
ATG4B-217ENST00000475693 MMP7P09237 267 aaPredicted RBP15.78■□□□□ 0.12
ATG4B-217ENST00000475693 HGFACQ04756 655 aa15.78■□□□□ 0.12
ATG4B-217ENST00000475693 IGFBP7Q16270 282 aa15.78■□□□□ 0.12
ATG4B-217ENST00000475693 PABPC1L2AQ5JQF8 200 aa15.78■□□□□ 0.12
ATG4B-217ENST00000475693 Q6ZT83 130 aa15.78■□□□□ 0.12
ATG4B-217ENST00000475693 GABRG1Q8N1C3 465 aa15.78■□□□□ 0.12
ATG4B-217ENST00000475693 BCL2L2Q92843 193 aaPredicted RBP15.78■□□□□ 0.12
ATG4B-217ENST00000475693 MS4A3Q96HJ5 214 aa15.78■□□□□ 0.12
ATG4B-217ENST00000475693 KCTD7Q96MP8 289 aa15.78■□□□□ 0.12
ATG4B-217ENST00000475693 SOX7Q9BT81 388 aa15.78■□□□□ 0.12
ATG4B-217ENST00000475693 GON7Q9BXV9 100 aa15.78■□□□□ 0.12
ATG4B-217ENST00000475693 ABCB9Q9NP78 766 aa15.78■□□□□ 0.12
ATG4B-217ENST00000475693 SGCEO43556 437 aa15.78■□□□□ 0.12
ATG4B-217ENST00000475693 SRSF10O75494 262 aaKnown RBP15.78■□□□□ 0.12
ATG4B-217ENST00000475693 MYL9P24844 172 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms