RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 NTF4P34130 210 aa13.54□□□□□ -0.24
RPUSD3-215ENST00000475470 PLGLB1Q02325 96 aa13.54□□□□□ -0.24
RPUSD3-215ENST00000475470 BCL2A1Q16548 175 aa13.54□□□□□ -0.24
RPUSD3-215ENST00000475470 GFOD2Q3B7J2 385 aa13.54□□□□□ -0.24
RPUSD3-215ENST00000475470 C1orf100Q5SVJ3 147 aa13.54□□□□□ -0.24
RPUSD3-215ENST00000475470 ATP1A1-AS1Q5TC04 95 aa13.54□□□□□ -0.24
RPUSD3-215ENST00000475470 GPR137CQ8N3F9 429 aa13.54□□□□□ -0.24
RPUSD3-215ENST00000475470 GALNT16Q8N428 558 aa13.54□□□□□ -0.24
RPUSD3-215ENST00000475470 ZNF486Q96H40 463 aaPredicted RBP13.54□□□□□ -0.24
RPUSD3-215ENST00000475470 CRLF2Q9HC73 371 aa13.54□□□□□ -0.24
RPUSD3-215ENST00000475470 HRASLSQ9HDD0 168 aa13.54□□□□□ -0.24
RPUSD3-215ENST00000475470 ZNF319Q9P2F9 582 aa13.54□□□□□ -0.24
RPUSD3-215ENST00000475470 OR5H15A6NDH6 313 aa13.53□□□□□ -0.24
RPUSD3-215ENST00000475470 A6NL46 340 aa13.53□□□□□ -0.24
RPUSD3-215ENST00000475470 F5H5K5 113 aa13.53□□□□□ -0.24
RPUSD3-215ENST00000475470 CTSSP25774 331 aa13.53□□□□□ -0.24
RPUSD3-215ENST00000475470 IFITM2Q01629 132 aa13.53□□□□□ -0.24
RPUSD3-215ENST00000475470 SRYQ05066 204 aa13.53□□□□□ -0.24
RPUSD3-215ENST00000475470 FAM27BQ5VT28 67 aa13.53□□□□□ -0.24
RPUSD3-215ENST00000475470 ADGRE4PQ86SQ3 457 aa13.53□□□□□ -0.24
RPUSD3-215ENST00000475470 PGAM5Q96HS1 289 aa13.53□□□□□ -0.24
RPUSD3-215ENST00000475470 FAM71F1Q96KD3 344 aaPredicted RBP13.53□□□□□ -0.24
RPUSD3-215ENST00000475470 DMRTB1Q96MA1 342 aa13.53□□□□□ -0.24
RPUSD3-215ENST00000475470 BEX2Q9BXY8 128 aa13.53□□□□□ -0.24
RPUSD3-215ENST00000475470 ITGB1BP2Q9UKP3 347 aa13.53□□□□□ -0.24
RPUSD3-215ENST00000475470 CIB4A0PJX0 185 aa13.53□□□□□ -0.24
RPUSD3-215ENST00000475470 ANKRD20A5PA0PJZ0 165 aa13.53□□□□□ -0.24
RPUSD3-215ENST00000475470 NAP1L6A6NFF2 107 aa13.53□□□□□ -0.24
RPUSD3-215ENST00000475470 CYTIPO60759 359 aa13.53□□□□□ -0.24
RPUSD3-215ENST00000475470 KDM4BO94953 1096 aa13.53□□□□□ -0.24
RPUSD3-215ENST00000475470 SP1P08047 785 aa13.53□□□□□ -0.24
RPUSD3-215ENST00000475470 MAGEA5P43359 124 aa13.53□□□□□ -0.24
RPUSD3-215ENST00000475470 SLC6A9P48067 706 aa13.53□□□□□ -0.24
RPUSD3-215ENST00000475470 CD83Q01151 205 aa13.53□□□□□ -0.24
RPUSD3-215ENST00000475470 ZFP69Q49AA0 526 aa13.53□□□□□ -0.24
RPUSD3-215ENST00000475470 ELFN2Q5R3F8 820 aa13.53□□□□□ -0.24
RPUSD3-215ENST00000475470 BIVMQ86UB2 503 aa13.53□□□□□ -0.24
RPUSD3-215ENST00000475470 DTX1Q86Y01 620 aa13.53□□□□□ -0.24
RPUSD3-215ENST00000475470 OR52N4Q8NGI2 321 aa13.53□□□□□ -0.24
RPUSD3-215ENST00000475470 OR13C9Q8NGT0 318 aa13.53□□□□□ -0.24
RPUSD3-215ENST00000475470 TP63Q9H3D4 680 aaPredicted RBP13.53□□□□□ -0.24
RPUSD3-215ENST00000475470 RANGRFQ9HD47 186 aaPredicted RBP13.53□□□□□ -0.24
RPUSD3-215ENST00000475470 PLEK2Q9NYT0 353 aa13.53□□□□□ -0.24
RPUSD3-215ENST00000475470 MYEF2Q9P2K5 600 aaKnown RBP13.53□□□□□ -0.24
RPUSD3-215ENST00000475470 KLF13Q9Y2Y9 288 aaPredicted RBP13.53□□□□□ -0.24
RPUSD3-215ENST00000475470 ARGFXA6NJG6 315 aa13.52□□□□□ -0.24
RPUSD3-215ENST00000475470 RBBP9O75884 186 aa13.52□□□□□ -0.24
RPUSD3-215ENST00000475470 ABOP16442 354 aa13.52□□□□□ -0.24
RPUSD3-215ENST00000475470 CAPZA1P52907 286 aa13.52□□□□□ -0.24
RPUSD3-215ENST00000475470 HIST1H3AP68431 136 aa13.52□□□□□ -0.24
RPUSD3-215ENST00000475470 CCDC92Q53HC0 331 aaPredicted RBP13.52□□□□□ -0.24
RPUSD3-215ENST00000475470 HIST2H3PS2Q5TEC6 136 aa13.52□□□□□ -0.24
RPUSD3-215ENST00000475470 SFRP4Q6FHJ7 346 aaPredicted RBP13.52□□□□□ -0.24
RPUSD3-215ENST00000475470 HIST2H3AQ71DI3 136 aa13.52□□□□□ -0.24
RPUSD3-215ENST00000475470 DOK3Q7L591 496 aa13.52□□□□□ -0.24
RPUSD3-215ENST00000475470 GALNTL5Q7Z4T8 443 aa13.52□□□□□ -0.24
RPUSD3-215ENST00000475470 LYPD6Q86Y78 171 aa13.52□□□□□ -0.24
RPUSD3-215ENST00000475470 OR4D6Q8NGJ1 314 aa13.52□□□□□ -0.24
RPUSD3-215ENST00000475470 ABHD3Q8WU67 409 aa13.52□□□□□ -0.24
RPUSD3-215ENST00000475470 FBXO17Q96EF6 278 aa13.52□□□□□ -0.24
RPUSD3-215ENST00000475470 GAL3ST1Q99999 423 aa13.52□□□□□ -0.24
RPUSD3-215ENST00000475470 SOX7Q9BT81 388 aa13.52□□□□□ -0.24
RPUSD3-215ENST00000475470 CNTD2Q9H8S5 307 aa13.52□□□□□ -0.24
RPUSD3-215ENST00000475470 NCOA6Q14686 2063 aaPredicted RBP13.52□□□□□ -0.25
RPUSD3-215ENST00000475470 ZNF318Q5VUA4 2279 aa13.52□□□□□ -0.25
RPUSD3-215ENST00000475470 GMDSO60547 372 aa13.52□□□□□ -0.25
RPUSD3-215ENST00000475470 ERCC1P07992 297 aaPredicted RBP13.52□□□□□ -0.25
RPUSD3-215ENST00000475470 LHX2P50458 406 aa13.52□□□□□ -0.25
RPUSD3-215ENST00000475470 RRAS2P62070 204 aaPredicted RBP13.52□□□□□ -0.25
RPUSD3-215ENST00000475470 SLC25A25Q6KCM7 469 aa13.52□□□□□ -0.25
RPUSD3-215ENST00000475470 DNM1P46Q6ZS02 220 aa13.52□□□□□ -0.25
RPUSD3-215ENST00000475470 BTN2A1Q7KYR7 527 aa13.52□□□□□ -0.25
RPUSD3-215ENST00000475470 NAA40Q86UY6 237 aa13.52□□□□□ -0.25
RPUSD3-215ENST00000475470 SLC22A24Q8N4F4 322 aa13.52□□□□□ -0.25
RPUSD3-215ENST00000475470 TMEM251Q8N6I4 163 aa13.52□□□□□ -0.25
RPUSD3-215ENST00000475470 CPT1CQ8TCG5 803 aa13.52□□□□□ -0.25
RPUSD3-215ENST00000475470 AKAP1Q92667 903 aaKnown RBP eCLIP13.52□□□□□ -0.25
RPUSD3-215ENST00000475470 ALKBH3Q96Q83 286 aaPredicted RBP13.52□□□□□ -0.25
RPUSD3-215ENST00000475470 SLC6A15Q9H2J7 730 aa13.52□□□□□ -0.25
RPUSD3-215ENST00000475470 MED13Q9UHV7 2174 aa13.52□□□□□ -0.25
RPUSD3-215ENST00000475470 A0A0A6YYJ9 748 aa13.51□□□□□ -0.25
RPUSD3-215ENST00000475470 KLRC4-KLRK1H3BQV0 150 aa13.51□□□□□ -0.25
RPUSD3-215ENST00000475470 H2AFB2P0C5Z0 115 aa13.51□□□□□ -0.25
RPUSD3-215ENST00000475470 GABRA1P14867 456 aa13.51□□□□□ -0.25
RPUSD3-215ENST00000475470 CCL1P22362 96 aa13.51□□□□□ -0.25
RPUSD3-215ENST00000475470 ANOS1P23352 680 aa13.51□□□□□ -0.25
RPUSD3-215ENST00000475470 ZNF627Q7L945 461 aa13.51□□□□□ -0.25
RPUSD3-215ENST00000475470 FYTTD1Q96QD9 318 aaKnown RBP13.51□□□□□ -0.25
RPUSD3-215ENST00000475470 UQCC2Q9BRT2 126 aa13.51□□□□□ -0.25
RPUSD3-215ENST00000475470 METTL17Q9H7H0 456 aaPredicted RBP13.51□□□□□ -0.25
RPUSD3-215ENST00000475470 MOV10Q9HCE1 1003 aaKnown RBP13.51□□□□□ -0.25
RPUSD3-215ENST00000475470 MCUBQ9NWR8 336 aa13.51□□□□□ -0.25
RPUSD3-215ENST00000475470 CDRT15L2A8MXV6 281 aa13.51□□□□□ -0.25
RPUSD3-215ENST00000475470 H7C417 338 aa13.51□□□□□ -0.25
RPUSD3-215ENST00000475470 LDLRAD4O15165 306 aa13.51□□□□□ -0.25
RPUSD3-215ENST00000475470 NME2P1O60361 137 aa13.51□□□□□ -0.25
RPUSD3-215ENST00000475470 APOC1P02654 83 aa13.51□□□□□ -0.25
RPUSD3-215ENST00000475470 NME2P22392 152 aa13.51□□□□□ -0.25
RPUSD3-215ENST00000475470 PRSS3P35030 304 aa13.51□□□□□ -0.25
RPUSD3-215ENST00000475470 MEOX1P50221 254 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms