RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 TMEM176BQ3YBM2 270 aaPredicted RBP4.33□□□□□ -1.72
NPHP3-206ENST00000474871 FBLN7Q53RD9 439 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 ZNF776Q68DI1 518 aaPredicted RBP4.33□□□□□ -1.72
NPHP3-206ENST00000474871 CAPN13Q6MZZ7 669 aaPredicted RBP4.33□□□□□ -1.72
NPHP3-206ENST00000474871 FAHD1Q6P587 224 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 TBPL2Q6SJ96 375 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 IFNEQ86WN2 208 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 PELI3Q8N2H9 469 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 GBGT1Q8N5D6 347 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 ACVR1CQ8NER5 493 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 KCNG3Q8TAE7 436 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 MOAP1Q96BY2 351 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 BPIFA2Q96DR5 249 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 WDR89Q96FK6 387 aaPredicted RBP4.33□□□□□ -1.72
NPHP3-206ENST00000474871 COQ2Q96H96 371 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 RAB40CQ96S21 281 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 ALG9Q9H6U8 611 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 HINT3Q9NQE9 182 aaKnown RBP4.33□□□□□ -1.72
NPHP3-206ENST00000474871 COMMD3Q9UBI1 195 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 COPS7AQ9UBW8 275 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 KLK11Q9UBX7 282 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 IKZF2Q9UKS7 526 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 RBM7Q9Y580 266 aaKnown RBP4.33□□□□□ -1.72
NPHP3-206ENST00000474871 SMIM9A6NGZ8 99 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 APOC4-APOC2K7ER74 178 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 APOC2P02655 101 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 MT-ND4LP03901 98 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 DBHP09172 617 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 ALPIP09923 528 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 ANKRD34CP0C6C1 535 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 SLC35G6P0C7Q6 338 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 MPGP29372 298 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 SSTR4P31391 388 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 ADRA1AP35348 466 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 SOX3P41225 446 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 AVPR1BP47901 424 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 RPL29P47914 159 aaKnown RBP4.33□□□□□ -1.72
NPHP3-206ENST00000474871 CDH12P55289 794 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 TAS2R30P59541 319 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 ZXDAP98168 799 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 HYAL1Q12794 435 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 OPCMLQ14982 345 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 PEA15Q15121 130 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 SMN1Q16637 294 aaKnown RBP4.33□□□□□ -1.72
NPHP3-206ENST00000474871 LINC01559Q495D7 138 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 PRSS36Q5K4E3 855 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 TMEM225Q6GV28 225 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 FAM45BPQ6NSW5 357 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 TMEM182Q6ZP80 229 aaPredicted RBP4.33□□□□□ -1.72
NPHP3-206ENST00000474871 ZNF605Q86T29 641 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 GKN2Q86XP6 184 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 FAM219AQ8IW50 185 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 MFSD6LQ8IWD5 586 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 SYS1Q8N2H4 156 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 ZNF611Q8N823 705 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 NAT16Q8N8M0 369 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 OR1N2Q8NGR9 330 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 OR10G6Q8NH81 332 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 LYPD6BQ8NI32 183 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 FAM45AQ8TCE6 357 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 PIH1D2Q8WWB5 315 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 PIGCQ92535 297 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 ZNF582Q96NG8 517 aaPredicted RBP4.33□□□□□ -1.72
NPHP3-206ENST00000474871 SSBP4Q9BWG4 385 aaPredicted RBP4.33□□□□□ -1.72
NPHP3-206ENST00000474871 WWTR1Q9GZV5 400 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 RNF167Q9H6Y7 350 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 TMPRSS4Q9NRS4 437 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 ETV7Q9Y603 341 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 NCKAP5O14513 1909 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 TCRBV7S2A1N4TA0A589 114 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 TMEM150CB9EJG8 249 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 UPK1AO00322 258 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 DHHO43323 396 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 HIST1H2BKO60814 126 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 RAD51DO75771 328 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 C1RP00736 705 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 PDYNP01213 254 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 HIST1H2BJP06899 126 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 ESDP10768 282 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 TYRP14679 529 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 HIST1H2BOP23527 126 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 HIST1H2BBP33778 126 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 DNASE1L1P49184 302 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 HIST1H2BDP58876 126 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 HIST1H2BCP62807 126 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 HIST2H2BEQ16778 126 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.33□□□□□ -1.72
NPHP3-206ENST00000474871 COMMD2Q86X83 199 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 PRELID2Q8N945 189 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 OR7A2PQ8NGA2 310 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 OR2Y1Q8NGV0 311 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 ASB10Q8WXI3 467 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 HIST1H2BHQ93079 126 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 PIK3IP1Q96FE7 263 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 SLC35E1Q96K37 410 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 TP53RKQ96S44 253 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 ARHGDIGQ99819 225 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 HIST1H2BNQ99877 126 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 HIST1H2BMQ99879 126 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 AARSD1Q9BTE6 412 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms