RNA–Protein interactions for RNA: ENST00000474550.5

NPAS2-208, Transcript of neuronal PAS domain protein 2, humanhuman

TSL 1 (best)

Gene NPAS2, Length 7,983 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2-208ENST00000474550 BOKQ9UMX3 212 aaPredicted RBP9.37□□□□□ -0.91
NPAS2-208ENST00000474550 LAMP3Q9UQV4 416 aa9.37□□□□□ -0.91
NPAS2-208ENST00000474550 YY2O15391 372 aa9.37□□□□□ -0.91
NPAS2-208ENST00000474550 CD1CP29017 333 aa9.37□□□□□ -0.91
NPAS2-208ENST00000474550 SLC25A42Q86VD7 318 aa9.37□□□□□ -0.91
NPAS2-208ENST00000474550 TSLPQ969D9 159 aa9.37□□□□□ -0.91
NPAS2-208ENST00000474550 CA5BQ9Y2D0 317 aa9.37□□□□□ -0.91
NPAS2-208ENST00000474550 TMEM272A0A1B0GTI8 110 aa9.37□□□□□ -0.91
NPAS2-208ENST00000474550 C9orf170A2RU37 121 aa9.37□□□□□ -0.91
NPAS2-208ENST00000474550 TMEM235A6NFC5 223 aa9.37□□□□□ -0.91
NPAS2-208ENST00000474550 C4orf47A7E2U8 309 aa9.37□□□□□ -0.91
NPAS2-208ENST00000474550 ZNF587BE7ETH6 402 aa9.37□□□□□ -0.91
NPAS2-208ENST00000474550 RNASEK-C17orf49H0YIS7 233 aa9.37□□□□□ -0.91
NPAS2-208ENST00000474550 SOX15O60248 233 aa9.37□□□□□ -0.91
NPAS2-208ENST00000474550 TGFBR3Q03167 851 aa9.37□□□□□ -0.91
NPAS2-208ENST00000474550 TMEM81Q6P7N7 255 aa9.37□□□□□ -0.91
NPAS2-208ENST00000474550 DOK4Q8TEW6 326 aa9.37□□□□□ -0.91
NPAS2-208ENST00000474550 TMED3Q9Y3Q3 217 aa9.37□□□□□ -0.91
NPAS2-208ENST00000474550 ITGB8P26012 769 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 LIMK1P53667 647 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 BEND4Q6ZU67 534 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.36□□□□□ -0.91
NPAS2-208ENST00000474550 S100A7AQ86SG5 101 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 CDC20BQ86Y33 519 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 LIPCP11150 499 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 NKX2-1P43699 371 aaPredicted RBP9.36□□□□□ -0.91
NPAS2-208ENST00000474550 FUT7Q11130 342 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 SLC37A2Q8TED4 501 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 MSI2Q96DH6 328 aaKnown RBP9.36□□□□□ -0.91
NPAS2-208ENST00000474550 NKX2-4Q9H2Z4 354 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 SFT2D2O95562 160 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 CD37P11049 281 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 CSNK1EP49674 416 aaKnown RBP9.36□□□□□ -0.91
NPAS2-208ENST00000474550 FAM27D1Q5T7N8 215 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 NAA40Q86UY6 237 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 ZNF547Q8IVP9 402 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 OR56B2PQ8NGI1 322 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 GPX7Q96SL4 187 aaPredicted RBP9.36□□□□□ -0.91
NPAS2-208ENST00000474550 B3GAT1Q9P2W7 334 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 CGGBP1Q9UFW8 167 aaPredicted RBP9.36□□□□□ -0.91
NPAS2-208ENST00000474550 PUS1Q9Y606 427 aaKnown RBP eCLIP9.36□□□□□ -0.91
NPAS2-208ENST00000474550 XRCC2O43543 280 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 RBP2P50120 134 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 INPP5JQ15735 1006 aaPredicted RBP9.36□□□□□ -0.91
NPAS2-208ENST00000474550 BPIFCQ8NFQ6 507 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 OR51A4Q8NGJ6 313 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 OR2G3Q8NGZ4 309 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 UHRF2Q96PU4 802 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 TMPRSS5Q9H3S3 457 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 PIGLQ9Y2B2 252 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 MPC2O95563 127 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 PGA3P0DJD8 388 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 CLINT1Q14677 625 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 MAMSTRQ6ZN01 415 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 Q6ZRG5 221 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 TMED6Q8WW62 240 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 PTP4A1Q93096 173 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 ST6GALNAC2Q9UJ37 374 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 DPP4P27487 766 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 ZNF136P52737 540 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 MAML2Q8IZL2 1156 aaPredicted RBP9.36□□□□□ -0.91
NPAS2-208ENST00000474550 MRPS24Q96EL2 167 aaKnown RBP9.36□□□□□ -0.91
NPAS2-208ENST00000474550 ULBP3Q9BZM4 244 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 PLEKHF2Q9H8W4 249 aa9.36□□□□□ -0.91
NPAS2-208ENST00000474550 PHF1O43189 567 aaPredicted RBP9.35□□□□□ -0.91
NPAS2-208ENST00000474550 RPS15P62841 145 aaKnown RBP9.35□□□□□ -0.91
NPAS2-208ENST00000474550 TANGO2Q6ICL3 276 aa9.35□□□□□ -0.91
NPAS2-208ENST00000474550 SHARPINQ9H0F6 387 aa9.35□□□□□ -0.91
NPAS2-208ENST00000474550 NIT2Q9NQR4 276 aa9.35□□□□□ -0.91
NPAS2-208ENST00000474550 FSTP19883 344 aa9.35□□□□□ -0.91
NPAS2-208ENST00000474550 KIAA0141Q14154 515 aaPredicted RBP9.35□□□□□ -0.91
NPAS2-208ENST00000474550 IL13RA2Q14627 380 aa9.35□□□□□ -0.91
NPAS2-208ENST00000474550 CPT1CQ8TCG5 803 aa9.35□□□□□ -0.91
NPAS2-208ENST00000474550 SMIM3Q9BZL3 60 aa9.35□□□□□ -0.91
NPAS2-208ENST00000474550 TMEM100Q9NV29 134 aa9.35□□□□□ -0.91
NPAS2-208ENST00000474550 SLC22A13Q9Y226 551 aa9.35□□□□□ -0.91
NPAS2-208ENST00000474550 KCNE3Q9Y6H6 103 aa9.35□□□□□ -0.91
NPAS2-208ENST00000474550 DOCK3Q8IZD9 2030 aa9.35□□□□□ -0.91
NPAS2-208ENST00000474550 B4DEV8 164 aa9.35□□□□□ -0.91
NPAS2-208ENST00000474550 ALOX5APP20292 161 aa9.35□□□□□ -0.91
NPAS2-208ENST00000474550 CCNOP22674 350 aa9.35□□□□□ -0.91
NPAS2-208ENST00000474550 C17orf47Q8NEP4 570 aa9.35□□□□□ -0.91
NPAS2-208ENST00000474550 KCNE4Q8WWG9 221 aa9.35□□□□□ -0.91
NPAS2-208ENST00000474550 PIK3IP1Q96FE7 263 aa9.35□□□□□ -0.91
NPAS2-208ENST00000474550 LRIT1Q9P2V4 623 aa9.35□□□□□ -0.91
NPAS2-208ENST00000474550 SSR4P51571 173 aa9.35□□□□□ -0.91
NPAS2-208ENST00000474550 COL13A1Q5TAT6 717 aaPredicted RBP9.35□□□□□ -0.91
NPAS2-208ENST00000474550 LINC01555Q8NAE3 123 aa9.35□□□□□ -0.91
NPAS2-208ENST00000474550 NUDCD2Q8WVJ2 157 aa9.35□□□□□ -0.91
NPAS2-208ENST00000474550 SF3B6Q9Y3B4 125 aaKnown RBP9.35□□□□□ -0.91
NPAS2-208ENST00000474550 CDC42EP2O14613 210 aa9.35□□□□□ -0.91
NPAS2-208ENST00000474550 SFTA3P0C7M3 94 aa9.35□□□□□ -0.91
NPAS2-208ENST00000474550 BCKDHBP21953 392 aa9.35□□□□□ -0.91
NPAS2-208ENST00000474550 PAX6P26367 422 aa9.35□□□□□ -0.91
NPAS2-208ENST00000474550 RANP62826 216 aaKnown RBP9.35□□□□□ -0.91
NPAS2-208ENST00000474550 OLIG3Q7RTU3 272 aa9.35□□□□□ -0.91
NPAS2-208ENST00000474550 SYT9Q86SS6 491 aa9.35□□□□□ -0.91
NPAS2-208ENST00000474550 RNF170Q96K19 258 aa9.35□□□□□ -0.91
NPAS2-208ENST00000474550 C20orf141Q9NUB4 165 aa9.35□□□□□ -0.91
NPAS2-208ENST00000474550 PCOLCE2Q9UKZ9 415 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms