RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 MLNRO43193 412 aa17.09■□□□□ 0.33
PDLIM4-206ENST00000474421 IRF2P14316 349 aa17.09■□□□□ 0.33
PDLIM4-206ENST00000474421 CFPP27918 469 aa17.09■□□□□ 0.33
PDLIM4-206ENST00000474421 GK2Q14410 553 aaPredicted RBP17.09■□□□□ 0.33
PDLIM4-206ENST00000474421 PGAP1Q75T13 922 aa17.09■□□□□ 0.33
PDLIM4-206ENST00000474421 MOGAT3Q86VF5 341 aa17.09■□□□□ 0.33
PDLIM4-206ENST00000474421 ARHGAP24Q8N264 748 aa17.09■□□□□ 0.33
PDLIM4-206ENST00000474421 PROKR2Q8NFJ6 384 aa17.09■□□□□ 0.33
PDLIM4-206ENST00000474421 ZNF420Q8TAQ5 688 aaPredicted RBP17.09■□□□□ 0.33
PDLIM4-206ENST00000474421 DVL3Q92997 716 aaPredicted RBP17.09■□□□□ 0.33
PDLIM4-206ENST00000474421 PLEKHA8Q96JA3 519 aa17.09■□□□□ 0.33
PDLIM4-206ENST00000474421 SLC22A4Q9H015 551 aa17.09■□□□□ 0.33
PDLIM4-206ENST00000474421 EGLN3Q9H6Z9 239 aa17.09■□□□□ 0.33
PDLIM4-206ENST00000474421 WDR76Q9H967 626 aa17.09■□□□□ 0.33
PDLIM4-206ENST00000474421 PNRC2Q9NPJ4 139 aaKnown RBP17.09■□□□□ 0.33
PDLIM4-206ENST00000474421 MRPL22Q9NWU5 206 aaKnown RBP17.09■□□□□ 0.33
PDLIM4-206ENST00000474421 IL20Q9NYY1 176 aa17.09■□□□□ 0.33
PDLIM4-206ENST00000474421 NUP50Q9UKX7 468 aa17.09■□□□□ 0.33
PDLIM4-206ENST00000474421 F5H5P2 479 aa17.08■□□□□ 0.32
PDLIM4-206ENST00000474421 H0YL77 283 aa17.08■□□□□ 0.32
PDLIM4-206ENST00000474421 BHLHE40O14503 412 aa17.08■□□□□ 0.32
PDLIM4-206ENST00000474421 WNT2P09544 360 aa17.08■□□□□ 0.32
PDLIM4-206ENST00000474421 RPS2P15880 293 aaKnown RBP17.08■□□□□ 0.32
PDLIM4-206ENST00000474421 GATA4P43694 442 aa17.08■□□□□ 0.32
PDLIM4-206ENST00000474421 SEC61A1P61619 476 aaKnown RBP17.08■□□□□ 0.32
PDLIM4-206ENST00000474421 CYP2R1Q6VVX0 501 aa17.08■□□□□ 0.32
PDLIM4-206ENST00000474421 OR4C15Q8NGM1 316 aa17.08■□□□□ 0.32
PDLIM4-206ENST00000474421 SPRYD4Q8WW59 207 aaPredicted RBP17.08■□□□□ 0.32
PDLIM4-206ENST00000474421 SSBP3Q9BWW4 388 aaPredicted RBP17.08■□□□□ 0.32
PDLIM4-206ENST00000474421 MUC13Q9H3R2 512 aa17.08■□□□□ 0.32
PDLIM4-206ENST00000474421 TMEM165Q9HC07 324 aa17.08■□□□□ 0.32
PDLIM4-206ENST00000474421 DDX28Q9NUL7 540 aaKnown RBP17.08■□□□□ 0.32
PDLIM4-206ENST00000474421 TENM1Q9UKZ4 2725 aa17.08■□□□□ 0.32
PDLIM4-206ENST00000474421 M0R135 149 aa17.07■□□□□ 0.32
PDLIM4-206ENST00000474421 CCNB2O95067 398 aa17.07■□□□□ 0.32
PDLIM4-206ENST00000474421 CYB5R3P00387 301 aaPredicted RBP17.07■□□□□ 0.32
PDLIM4-206ENST00000474421 RBMXP38159 391 aaKnown RBP17.07■□□□□ 0.32
PDLIM4-206ENST00000474421 MAGEA2P43356 314 aa17.07■□□□□ 0.32
PDLIM4-206ENST00000474421 RAD23AP54725 363 aa17.07■□□□□ 0.32
PDLIM4-206ENST00000474421 BTNL3Q6UXE8 466 aa17.07■□□□□ 0.32
PDLIM4-206ENST00000474421 RASSF6Q6ZTQ3 369 aa17.07■□□□□ 0.32
PDLIM4-206ENST00000474421 NLRC3Q7RTR2 1065 aa17.07■□□□□ 0.32
PDLIM4-206ENST00000474421 MRPL21Q7Z2W9 205 aaKnown RBP17.07■□□□□ 0.32
PDLIM4-206ENST00000474421 C3orf56Q8N813 242 aa17.07■□□□□ 0.32
PDLIM4-206ENST00000474421 OR9Q2Q8NGE9 314 aa17.07■□□□□ 0.32
PDLIM4-206ENST00000474421 OR11L1Q8NGX0 322 aa17.07■□□□□ 0.32
PDLIM4-206ENST00000474421 C22orf15Q8WYQ4 148 aa17.07■□□□□ 0.32
PDLIM4-206ENST00000474421 SLCO4A1Q96BD0 722 aa17.07■□□□□ 0.32
PDLIM4-206ENST00000474421 ZMYND19Q96E35 227 aaPredicted RBP17.07■□□□□ 0.32
PDLIM4-206ENST00000474421 ZNF799Q96GE5 643 aa17.07■□□□□ 0.32
PDLIM4-206ENST00000474421 MAP6Q96JE9 813 aa17.07■□□□□ 0.32
PDLIM4-206ENST00000474421 BTBD10Q9BSF8 475 aa17.07■□□□□ 0.32
PDLIM4-206ENST00000474421 MAGIXQ9H6Y5 334 aa17.07■□□□□ 0.32
PDLIM4-206ENST00000474421 BAIAP2Q9UQB8 552 aa17.07■□□□□ 0.32
PDLIM4-206ENST00000474421 HLA-DPB1P04440 258 aa17.06■□□□□ 0.32
PDLIM4-206ENST00000474421 PPIAL4GP0DN37 164 aa17.06■□□□□ 0.32
PDLIM4-206ENST00000474421 PYCR1P32322 319 aa17.06■□□□□ 0.32
PDLIM4-206ENST00000474421 CD200P41217 278 aa17.06■□□□□ 0.32
PDLIM4-206ENST00000474421 GNB2P62879 340 aa17.06■□□□□ 0.32
PDLIM4-206ENST00000474421 PAX8Q06710 450 aa17.06■□□□□ 0.32
PDLIM4-206ENST00000474421 ZNF404Q494X3 552 aa17.06■□□□□ 0.32
PDLIM4-206ENST00000474421 ZNF770Q6IQ21 691 aaPredicted RBP17.06■□□□□ 0.32
PDLIM4-206ENST00000474421 LRRN1Q6UXK5 716 aa17.06■□□□□ 0.32
PDLIM4-206ENST00000474421 KLBQ86Z14 1044 aa17.06■□□□□ 0.32
PDLIM4-206ENST00000474421 ZDHHC22Q8N966 263 aa17.06■□□□□ 0.32
PDLIM4-206ENST00000474421 CYB561A3Q8NBI2 242 aa17.06■□□□□ 0.32
PDLIM4-206ENST00000474421 Q8TCH9 128 aa17.06■□□□□ 0.32
PDLIM4-206ENST00000474421 NEIL1Q96FI4 390 aaPredicted RBP17.06■□□□□ 0.32
PDLIM4-206ENST00000474421 DDOQ99489 341 aa17.06■□□□□ 0.32
PDLIM4-206ENST00000474421 ZMAT3Q9HA38 289 aaKnown RBP17.06■□□□□ 0.32
PDLIM4-206ENST00000474421 TBC1D23Q9NUY8 699 aa17.06■□□□□ 0.32
PDLIM4-206ENST00000474421 PPIAL4AQ9Y536 164 aa17.06■□□□□ 0.32
PDLIM4-206ENST00000474421 B2RBV5 119 aa17.05■□□□□ 0.32
PDLIM4-206ENST00000474421 GASTP01350 101 aa17.05■□□□□ 0.32
PDLIM4-206ENST00000474421 ATP6V1B2P21281 511 aa17.05■□□□□ 0.32
PDLIM4-206ENST00000474421 GYS2P54840 703 aa17.05■□□□□ 0.32
PDLIM4-206ENST00000474421 UBA52P62987 128 aaKnown RBP17.05■□□□□ 0.32
PDLIM4-206ENST00000474421 DBPQ10586 325 aaPredicted RBP17.05■□□□□ 0.32
PDLIM4-206ENST00000474421 DRAM2Q6UX65 266 aa17.05■□□□□ 0.32
PDLIM4-206ENST00000474421 DOK3Q7L591 496 aa17.05■□□□□ 0.32
PDLIM4-206ENST00000474421 NAA40Q86UY6 237 aa17.05■□□□□ 0.32
PDLIM4-206ENST00000474421 LNX2Q8N448 690 aa17.05■□□□□ 0.32
PDLIM4-206ENST00000474421 OR8B3Q8NGG8 313 aa17.05■□□□□ 0.32
PDLIM4-206ENST00000474421 OR8B2Q96RD0 313 aa17.05■□□□□ 0.32
PDLIM4-206ENST00000474421 TMEM246Q9BRR3 403 aa17.05■□□□□ 0.32
PDLIM4-206ENST00000474421 ESM1Q9NQ30 184 aa17.05■□□□□ 0.32
PDLIM4-206ENST00000474421 IGHV3-64DA0A0J9YX35 117 aa17.04■□□□□ 0.32
PDLIM4-206ENST00000474421 GMDSO60547 372 aa17.04■□□□□ 0.32
PDLIM4-206ENST00000474421 ZNF205O95201 554 aa17.04■□□□□ 0.32
PDLIM4-206ENST00000474421 FMO3P31513 532 aa17.04■□□□□ 0.32
PDLIM4-206ENST00000474421 OTX1P32242 354 aaPredicted RBP17.04■□□□□ 0.32
PDLIM4-206ENST00000474421 BLVRAP53004 296 aa17.04■□□□□ 0.32
PDLIM4-206ENST00000474421 MAB21L1Q13394 359 aa17.04■□□□□ 0.32
PDLIM4-206ENST00000474421 OR8G1Q15617 311 aa17.04■□□□□ 0.32
PDLIM4-206ENST00000474421 TUSC1Q2TAM9 212 aa17.04■□□□□ 0.32
PDLIM4-206ENST00000474421 DHFR2Q86XF0 187 aa17.04■□□□□ 0.32
PDLIM4-206ENST00000474421 SIGLECL1Q8N7X8 197 aa17.04■□□□□ 0.32
PDLIM4-206ENST00000474421 AQP11Q8NBQ7 271 aa17.04■□□□□ 0.32
PDLIM4-206ENST00000474421 PLPP7Q8NBV4 271 aa17.04■□□□□ 0.32
PDLIM4-206ENST00000474421 SLC37A3Q8NCC5 494 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms