RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 CXXC5Q7LFL8 322 aaKnown RBP9.45□□□□□ -0.9
CKS1B-206ENST00000474215 DCXRQ7Z4W1 244 aa9.45□□□□□ -0.9
CKS1B-206ENST00000474215 IQCF1Q8N6M8 205 aa9.45□□□□□ -0.9
CKS1B-206ENST00000474215 ZNF283Q8N7M2 679 aa9.45□□□□□ -0.9
CKS1B-206ENST00000474215 OR6K6Q8NGW6 343 aa9.45□□□□□ -0.9
CKS1B-206ENST00000474215 ITLN1Q8WWA0 313 aa9.45□□□□□ -0.9
CKS1B-206ENST00000474215 OR2V2Q96R30 315 aa9.45□□□□□ -0.9
CKS1B-206ENST00000474215 GAL3ST1Q99999 423 aa9.45□□□□□ -0.9
CKS1B-206ENST00000474215 SLC30A2Q9BRI3 323 aa9.45□□□□□ -0.9
CKS1B-206ENST00000474215 CADM1Q9BY67 442 aaKnown RBP9.45□□□□□ -0.9
CKS1B-206ENST00000474215 ZNF556Q9HAH1 456 aa9.45□□□□□ -0.9
CKS1B-206ENST00000474215 DDX28Q9NUL7 540 aaKnown RBP9.45□□□□□ -0.9
CKS1B-206ENST00000474215 TMEM106BQ9NUM4 274 aa9.45□□□□□ -0.9
CKS1B-206ENST00000474215 TMEM100Q9NV29 134 aa9.45□□□□□ -0.9
CKS1B-206ENST00000474215 NPTNQ9Y639 398 aa9.45□□□□□ -0.9
CKS1B-206ENST00000474215 COMMD3-BMI1R4GMX3 469 aa9.45□□□□□ -0.9
CKS1B-206ENST00000474215 A0A1B0GWJ7 208 aa9.44□□□□□ -0.9
CKS1B-206ENST00000474215 ISPDA4D126 451 aa9.44□□□□□ -0.9
CKS1B-206ENST00000474215 FAM183AA6NL82 134 aa9.44□□□□□ -0.9
CKS1B-206ENST00000474215 RNF212BA8MTL3 300 aa9.44□□□□□ -0.9
CKS1B-206ENST00000474215 H0YL77 283 aa9.44□□□□□ -0.9
CKS1B-206ENST00000474215 IFNL4K9M1U5 179 aa9.44□□□□□ -0.9
CKS1B-206ENST00000474215 M0R135 149 aa9.44□□□□□ -0.9
CKS1B-206ENST00000474215 PSKH1P11801 424 aa9.44□□□□□ -0.9
CKS1B-206ENST00000474215 OSMP13725 252 aa9.44□□□□□ -0.9
CKS1B-206ENST00000474215 ANXA8P13928 327 aa9.44□□□□□ -0.9
CKS1B-206ENST00000474215 POU1F1P28069 291 aa9.44□□□□□ -0.9
CKS1B-206ENST00000474215 OTX1P32242 354 aaPredicted RBP9.44□□□□□ -0.9
CKS1B-206ENST00000474215 SRP9P49458 86 aaKnown RBP9.44□□□□□ -0.9
CKS1B-206ENST00000474215 HNRNPA0Q13151 305 aaKnown RBP9.44□□□□□ -0.9
CKS1B-206ENST00000474215 GINS1Q14691 196 aa9.44□□□□□ -0.9
CKS1B-206ENST00000474215 TAF13Q15543 124 aa9.44□□□□□ -0.9
CKS1B-206ENST00000474215 LINC01590Q5TEZ4 76 aa9.44□□□□□ -0.9
CKS1B-206ENST00000474215 FAHD2BQ6P2I3 314 aaPredicted RBP9.44□□□□□ -0.9
CKS1B-206ENST00000474215 DRAM2Q6UX65 266 aa9.44□□□□□ -0.9
CKS1B-206ENST00000474215 PGAP1Q75T13 922 aa9.44□□□□□ -0.9
CKS1B-206ENST00000474215 HS3ST5Q8IZT8 346 aa9.44□□□□□ -0.9
CKS1B-206ENST00000474215 BHLHE23Q8NDY6 225 aa9.44□□□□□ -0.9
CKS1B-206ENST00000474215 OR10AD1Q8NGE0 317 aa9.44□□□□□ -0.9
CKS1B-206ENST00000474215 SPATA3Q8NHX4 192 aa9.44□□□□□ -0.9
CKS1B-206ENST00000474215 ST7LQ8TDW4 575 aa9.44□□□□□ -0.9
CKS1B-206ENST00000474215 TMEM158Q8WZ71 300 aa9.44□□□□□ -0.9
CKS1B-206ENST00000474215 SLCO4A1Q96BD0 722 aa9.44□□□□□ -0.9
CKS1B-206ENST00000474215 OTULINQ96BN8 352 aa9.44□□□□□ -0.9
CKS1B-206ENST00000474215 SLAMF6Q96DU3 332 aa9.44□□□□□ -0.9
CKS1B-206ENST00000474215 ZNF799Q96GE5 643 aa9.44□□□□□ -0.9
CKS1B-206ENST00000474215 FAHD2AQ96GK7 314 aa9.44□□□□□ -0.9
CKS1B-206ENST00000474215 MED20Q9H944 212 aa9.44□□□□□ -0.9
CKS1B-206ENST00000474215 GCM1Q9NP62 436 aa9.44□□□□□ -0.9
CKS1B-206ENST00000474215 CENPMQ9NSP4 180 aa9.44□□□□□ -0.9
CKS1B-206ENST00000474215 DCAF16Q9NXF7 216 aa9.44□□□□□ -0.9
CKS1B-206ENST00000474215 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.44□□□□□ -0.9
CKS1B-206ENST00000474215 IGHV2-70P01814 119 aa9.43□□□□□ -0.9
CKS1B-206ENST00000474215 HMGN1P05114 100 aa9.43□□□□□ -0.9
CKS1B-206ENST00000474215 PAICSP22234 425 aaKnown RBP9.43□□□□□ -0.9
CKS1B-206ENST00000474215 GSTT1P30711 240 aa9.43□□□□□ -0.9
CKS1B-206ENST00000474215 RBMXP38159 391 aaKnown RBP9.43□□□□□ -0.9
CKS1B-206ENST00000474215 SLC15A1P46059 708 aa9.43□□□□□ -0.9
CKS1B-206ENST00000474215 SLC6A9P48067 706 aa9.43□□□□□ -0.9
CKS1B-206ENST00000474215 RASSF2P50749 326 aa9.43□□□□□ -0.9
CKS1B-206ENST00000474215 CDK5Q00535 292 aa9.43□□□□□ -0.9
CKS1B-206ENST00000474215 ZNF771Q7L3S4 317 aaPredicted RBP9.43□□□□□ -0.9
CKS1B-206ENST00000474215 MRPL21Q7Z2W9 205 aaKnown RBP9.43□□□□□ -0.9
CKS1B-206ENST00000474215 LRRC28Q86X40 367 aaPredicted RBP9.43□□□□□ -0.9
CKS1B-206ENST00000474215 SPRYD4Q8WW59 207 aaPredicted RBP9.43□□□□□ -0.9
CKS1B-206ENST00000474215 NRBF2Q96F24 287 aa9.43□□□□□ -0.9
CKS1B-206ENST00000474215 MEGF10Q96KG7 1140 aa9.43□□□□□ -0.9
CKS1B-206ENST00000474215 KCNJ15Q99712 375 aa9.43□□□□□ -0.9
CKS1B-206ENST00000474215 COPS4Q9BT78 406 aa9.43□□□□□ -0.9
CKS1B-206ENST00000474215 REPIN1Q9BWE0 567 aaKnown RBP9.43□□□□□ -0.9
CKS1B-206ENST00000474215 MARCH7Q9H992 704 aa9.43□□□□□ -0.9
CKS1B-206ENST00000474215 NTN4Q9HB63 628 aa9.43□□□□□ -0.9
CKS1B-206ENST00000474215 G6PC2Q9NQR9 355 aa9.43□□□□□ -0.9
CKS1B-206ENST00000474215 UBAP1Q9NZ09 502 aa9.43□□□□□ -0.9
CKS1B-206ENST00000474215 PCDHB10Q9UN67 800 aa9.43□□□□□ -0.9
CKS1B-206ENST00000474215 CD300LBA8K4G0 201 aa9.42□□□□□ -0.9
CKS1B-206ENST00000474215 ZNF878C9JN71 531 aa9.42□□□□□ -0.9
CKS1B-206ENST00000474215 PRR23D1E9PI22 279 aaPredicted RBP9.42□□□□□ -0.9
CKS1B-206ENST00000474215 F5H5P2 479 aa9.42□□□□□ -0.9
CKS1B-206ENST00000474215 TMEM178BH3BS89 294 aa9.42□□□□□ -0.9
CKS1B-206ENST00000474215 MLNRO43193 412 aa9.42□□□□□ -0.9
CKS1B-206ENST00000474215 ATP5HO75947 161 aa9.42□□□□□ -0.9
CKS1B-206ENST00000474215 GLCEO94923 617 aa9.42□□□□□ -0.9
CKS1B-206ENST00000474215 PNPP00491 289 aa9.42□□□□□ -0.9
CKS1B-206ENST00000474215 HLA-DPB1P04440 258 aa9.42□□□□□ -0.9
CKS1B-206ENST00000474215 PRR23D2P0DMB1 279 aaPredicted RBP9.42□□□□□ -0.9
CKS1B-206ENST00000474215 MMP16P51512 607 aa9.42□□□□□ -0.9
CKS1B-206ENST00000474215 PRKXP51817 358 aa9.42□□□□□ -0.9
CKS1B-206ENST00000474215 PRSS12P56730 875 aa9.42□□□□□ -0.9
CKS1B-206ENST00000474215 BTG1P62324 171 aa9.42□□□□□ -0.9
CKS1B-206ENST00000474215 ZNF92Q03936 586 aa9.42□□□□□ -0.9
CKS1B-206ENST00000474215 EIF2B1Q14232 305 aaKnown RBP9.42□□□□□ -0.9
CKS1B-206ENST00000474215 ZMYND11Q15326 602 aa9.42□□□□□ -0.9
CKS1B-206ENST00000474215 SNAI3Q3KNW1 292 aa9.42□□□□□ -0.9
CKS1B-206ENST00000474215 TMEM155Q4W5P6 130 aa9.42□□□□□ -0.9
CKS1B-206ENST00000474215 LCE2DQ5TA82 110 aaPredicted RBP9.42□□□□□ -0.9
CKS1B-206ENST00000474215 PLBD1Q6P4A8 553 aa9.42□□□□□ -0.9
CKS1B-206ENST00000474215 SHQ1Q6PI26 577 aaKnown RBP9.42□□□□□ -0.9
CKS1B-206ENST00000474215 SPATC1Q76KD6 591 aa9.42□□□□□ -0.9
CKS1B-206ENST00000474215 RHOUQ7L0Q8 258 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms