RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 FANK1Q8TC84 345 aa11.15□□□□□ -0.62
COPS7B-219ENST00000474042 ERGIC1Q969X5 290 aa11.15□□□□□ -0.62
COPS7B-219ENST00000474042 TMIGD2Q96BF3 282 aa11.15□□□□□ -0.62
COPS7B-219ENST00000474042 KCTD14Q9BQ13 255 aaPredicted RBP11.15□□□□□ -0.62
COPS7B-219ENST00000474042 KRCC1Q9NPI7 259 aaPredicted RBP11.15□□□□□ -0.62
COPS7B-219ENST00000474042 TMEM100Q9NV29 134 aa11.15□□□□□ -0.62
COPS7B-219ENST00000474042 CLN8Q9UBY8 286 aa11.15□□□□□ -0.62
COPS7B-219ENST00000474042 RPS6KA6Q9UK32 745 aa11.15□□□□□ -0.62
COPS7B-219ENST00000474042 B9D1Q9UPM9 204 aa11.15□□□□□ -0.62
COPS7B-219ENST00000474042 AURKCQ9UQB9 309 aa11.15□□□□□ -0.62
COPS7B-219ENST00000474042 SRRM5B3KS81 715 aa11.14□□□□□ -0.63
COPS7B-219ENST00000474042 NDUFAB1O14561 156 aa11.14□□□□□ -0.63
COPS7B-219ENST00000474042 ARPC3O15145 178 aa11.14□□□□□ -0.63
COPS7B-219ENST00000474042 HOXA3O43365 443 aaPredicted RBP11.14□□□□□ -0.63
COPS7B-219ENST00000474042 ENSAO43768 121 aaKnown RBP11.14□□□□□ -0.63
COPS7B-219ENST00000474042 FAM20BO75063 409 aa11.14□□□□□ -0.63
COPS7B-219ENST00000474042 PTBP3O95758 552 aaKnown RBP11.14□□□□□ -0.63
COPS7B-219ENST00000474042 MDH1P40925 334 aaKnown RBP11.14□□□□□ -0.63
COPS7B-219ENST00000474042 NUDT2P50583 147 aa11.14□□□□□ -0.63
COPS7B-219ENST00000474042 FGF12P61328 243 aa11.14□□□□□ -0.63
COPS7B-219ENST00000474042 DBPQ10586 325 aaPredicted RBP11.14□□□□□ -0.63
COPS7B-219ENST00000474042 OCLNQ16625 522 aa11.14□□□□□ -0.63
COPS7B-219ENST00000474042 PDLIM3Q53GG5 364 aaPredicted RBP11.14□□□□□ -0.63
COPS7B-219ENST00000474042 PRAMEF6Q5VXH4 476 aa11.14□□□□□ -0.63
COPS7B-219ENST00000474042 BRD3OSQ6XYD6 125 aa11.14□□□□□ -0.63
COPS7B-219ENST00000474042 ZBTB46Q86UZ6 589 aa11.14□□□□□ -0.63
COPS7B-219ENST00000474042 LINC00346Q8IVM7 164 aa11.14□□□□□ -0.63
COPS7B-219ENST00000474042 WFDC12Q8WWY7 111 aa11.14□□□□□ -0.63
COPS7B-219ENST00000474042 ERMAPQ96PL5 475 aaPredicted RBP11.14□□□□□ -0.63
COPS7B-219ENST00000474042 ATF6BQ99941 703 aa11.14□□□□□ -0.63
COPS7B-219ENST00000474042 OR52D1Q9H346 318 aa11.14□□□□□ -0.63
COPS7B-219ENST00000474042 CTSZQ9UBR2 303 aa11.14□□□□□ -0.63
COPS7B-219ENST00000474042 CYB5R1Q9UHQ9 305 aa11.14□□□□□ -0.63
COPS7B-219ENST00000474042 FAM32AQ9Y421 112 aaKnown RBP11.14□□□□□ -0.63
COPS7B-219ENST00000474042 DIRAS1O95057 198 aa11.13□□□□□ -0.63
COPS7B-219ENST00000474042 RENP00797 406 aa11.13□□□□□ -0.63
COPS7B-219ENST00000474042 SEMG1P04279 462 aa11.13□□□□□ -0.63
COPS7B-219ENST00000474042 IRF2P14316 349 aa11.13□□□□□ -0.63
COPS7B-219ENST00000474042 MMP9P14780 707 aa11.13□□□□□ -0.63
COPS7B-219ENST00000474042 HIST1H1CP16403 213 aaKnown RBP11.13□□□□□ -0.63
COPS7B-219ENST00000474042 SLC6A6P31641 620 aa11.13□□□□□ -0.63
COPS7B-219ENST00000474042 GGT2P36268 569 aa11.13□□□□□ -0.63
COPS7B-219ENST00000474042 CENPAP49450 140 aa11.13□□□□□ -0.63
COPS7B-219ENST00000474042 BPIFB3P59826 476 aa11.13□□□□□ -0.63
COPS7B-219ENST00000474042 TRAP1Q12931 704 aaKnown RBP11.13□□□□□ -0.63
COPS7B-219ENST00000474042 ECH1Q13011 328 aa11.13□□□□□ -0.63
COPS7B-219ENST00000474042 MPPED2Q15777 294 aa11.13□□□□□ -0.63
COPS7B-219ENST00000474042 RFX4Q33E94 735 aa11.13□□□□□ -0.63
COPS7B-219ENST00000474042 SLC36A3Q495N2 470 aa11.13□□□□□ -0.63
COPS7B-219ENST00000474042 OR11L1Q8NGX0 322 aa11.13□□□□□ -0.63
COPS7B-219ENST00000474042 NMNAT3Q96T66 252 aa11.13□□□□□ -0.63
COPS7B-219ENST00000474042 PITX2Q99697 317 aa11.13□□□□□ -0.63
COPS7B-219ENST00000474042 EFCAB1Q9HAE3 211 aa11.13□□□□□ -0.63
COPS7B-219ENST00000474042 DCAF13Q9NV06 445 aaKnown RBP11.13□□□□□ -0.63
COPS7B-219ENST00000474042 TMCC3Q9ULS5 477 aa11.13□□□□□ -0.63
COPS7B-219ENST00000474042 SAMD4AQ9UPU9 718 aaKnown RBP11.13□□□□□ -0.63
COPS7B-219ENST00000474042 A0A1B0GUS0 222 aa11.12□□□□□ -0.63
COPS7B-219ENST00000474042 FAM181BA6NEQ2 426 aa11.12□□□□□ -0.63
COPS7B-219ENST00000474042 F5H5K5 113 aa11.12□□□□□ -0.63
COPS7B-219ENST00000474042 CCDC22O60826 627 aa11.12□□□□□ -0.63
COPS7B-219ENST00000474042 OMGP23515 440 aa11.12□□□□□ -0.63
COPS7B-219ENST00000474042 CFHR2P36980 270 aa11.12□□□□□ -0.63
COPS7B-219ENST00000474042 NPY4RP50391 375 aa11.12□□□□□ -0.63
COPS7B-219ENST00000474042 HOXA4Q00056 320 aaPredicted RBP11.12□□□□□ -0.63
COPS7B-219ENST00000474042 MALLQ13021 153 aa11.12□□□□□ -0.63
COPS7B-219ENST00000474042 GPR157Q5UAW9 335 aa11.12□□□□□ -0.63
COPS7B-219ENST00000474042 RUSC1-AS1Q66K80 236 aa11.12□□□□□ -0.63
COPS7B-219ENST00000474042 Q6YL49 198 aa11.12□□□□□ -0.63
COPS7B-219ENST00000474042 NAA40Q86UY6 237 aa11.12□□□□□ -0.63
COPS7B-219ENST00000474042 TMEM86BQ8N661 226 aa11.12□□□□□ -0.63
COPS7B-219ENST00000474042 C19orf18Q8NEA5 215 aa11.12□□□□□ -0.63
COPS7B-219ENST00000474042 OR4K13Q8NH42 304 aa11.12□□□□□ -0.63
COPS7B-219ENST00000474042 OR52J3Q8NH60 311 aa11.12□□□□□ -0.63
COPS7B-219ENST00000474042 FN3KQ9H479 309 aa11.12□□□□□ -0.63
COPS7B-219ENST00000474042 MARCH7Q9H992 704 aa11.12□□□□□ -0.63
COPS7B-219ENST00000474042 SRA1Q9HD15 236 aaKnown RBP11.12□□□□□ -0.63
COPS7B-219ENST00000474042 NOX4Q9NPH5 578 aa11.12□□□□□ -0.63
COPS7B-219ENST00000474042 RPRD1BQ9NQG5 326 aaKnown RBP11.12□□□□□ -0.63
COPS7B-219ENST00000474042 MRPL22Q9NWU5 206 aaKnown RBP11.12□□□□□ -0.63
COPS7B-219ENST00000474042 KCNG2Q9UJ96 466 aa11.12□□□□□ -0.63
COPS7B-219ENST00000474042 NOP16Q9Y3C1 178 aaKnown RBP11.12□□□□□ -0.63
COPS7B-219ENST00000474042 OR6C68A6NDL8 312 aa11.11□□□□□ -0.63
COPS7B-219ENST00000474042 M0R135 149 aa11.11□□□□□ -0.63
COPS7B-219ENST00000474042 LGALS8O00214 317 aa11.11□□□□□ -0.63
COPS7B-219ENST00000474042 P2RY10O00398 339 aa11.11□□□□□ -0.63
COPS7B-219ENST00000474042 TNFRSF13BO14836 293 aaPredicted RBP11.11□□□□□ -0.63
COPS7B-219ENST00000474042 NDUFA7O95182 113 aa11.11□□□□□ -0.63
COPS7B-219ENST00000474042 LCATP04180 440 aa11.11□□□□□ -0.63
COPS7B-219ENST00000474042 SFTPBP07988 381 aa11.11□□□□□ -0.63
COPS7B-219ENST00000474042 MELTFP08582 738 aa11.11□□□□□ -0.63
COPS7B-219ENST00000474042 ANOS1P23352 680 aa11.11□□□□□ -0.63
COPS7B-219ENST00000474042 OTX1P32242 354 aaPredicted RBP11.11□□□□□ -0.63
COPS7B-219ENST00000474042 GSSP48637 474 aa11.11□□□□□ -0.63
COPS7B-219ENST00000474042 RAG2P55895 527 aa11.11□□□□□ -0.63
COPS7B-219ENST00000474042 PSME3P61289 254 aa11.11□□□□□ -0.63
COPS7B-219ENST00000474042 RELBQ01201 579 aa11.11□□□□□ -0.63
COPS7B-219ENST00000474042 DEFA6Q01524 100 aa11.11□□□□□ -0.63
COPS7B-219ENST00000474042 ZNF362Q5T0B9 420 aaPredicted RBP11.11□□□□□ -0.63
COPS7B-219ENST00000474042 GLYATQ6IB77 296 aa11.11□□□□□ -0.63
COPS7B-219ENST00000474042 ZNF620Q6ZNG0 422 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms