RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 DISC1C4P0D8 188 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 ZNF878C9JN71 531 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 D6RAR5 112 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 MS4A18H0YCH9 400 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 H3BML4 177 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 H7C417 338 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 SULT2B1O00204 365 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 ARPC1BO15143 372 aaKnown RBP5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 FABP7O15540 132 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 SYT7O43581 403 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 ZNF780AO75290 641 aaPredicted RBP5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 CTAG2O75638 210 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 NDUFB6O95139 128 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 VAMP5O95183 116 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 CYB5AP00167 134 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 RLN1P04808 185 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 IL5P05113 134 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 LPLP06858 475 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 DUX4L2P0CJ85 424 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 DUX4L3P0CJ86 424 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 DUX4L4P0CJ87 422 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 DUX4L5P0CJ88 424 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 DUX4L6P0CJ89 424 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 DUX4L7P0CJ90 424 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 SULT1A3P0DMM9 295 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 SULT1A4P0DMN0 295 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 ICAM2P13598 275 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 CPN1P15169 458 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 RAB3AP20336 220 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 TCEA1P23193 301 aaKnown RBP5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 DNASE1P24855 282 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 BTCP35070 178 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 PTH2RP49190 550 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 SSR4P51571 173 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 CCR6P51684 374 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 CLDN12P56749 244 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 GMFBP60983 142 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 RAP2BP61225 183 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 MYBPHQ13203 477 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 MEF2DQ14814 521 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 ZMYND11Q15326 602 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 SHBQ15464 509 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 GSG1Q2KHT4 349 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 MS4A18Q3C1V0 323 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 C1QL3Q5VWW1 255 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 SFRP4Q6FHJ7 346 aaPredicted RBP5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 OR5M10Q6IEU7 315 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 ESPNLQ6ZVH7 1005 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 PGAP1Q75T13 922 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 RHOUQ7L0Q8 258 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 CHMP1BQ7LBR1 199 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 PRSS45Q7RTY3 260 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 KANSL1Q7Z3B3 1105 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 GPAT4Q86UL3 456 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 SERPINA12Q8IW75 414 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 Q8N1X5 172 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 PRSS35Q8N3Z0 413 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 FAM109AQ8N4B1 249 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 SLC22A24Q8N4F4 322 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 TMEM156Q8N614 296 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 CCDC54Q8NEL0 328 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 DNAAF1Q8NEP3 725 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 OR2M3Q8NG83 312 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 OR6N1Q8NGY5 312 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 OR6X1Q8NH79 312 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 M1APQ8TC57 530 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 TNFAIP8L1Q8WVP5 186 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 RNF133Q8WVZ7 376 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 HSD17B8Q92506 261 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 FAM46BQ96A09 425 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 C8orf44Q96CB5 159 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 DNAJA3Q96EY1 480 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 CPNE2Q96FN4 548 aaPredicted RBP5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 RNF170Q96K19 258 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 OR5B2Q96R09 309 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 CDX2Q99626 313 aaPredicted RBP5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 GINS4Q9BRT9 223 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 ZPBPQ9BS86 351 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 ULBP3Q9BZM4 244 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 RTN4RQ9BZR6 473 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 ZNF436Q9C0F3 470 aaPredicted RBP5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 STRADBQ9C0K7 418 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 OR10A4Q9H209 315 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 GHITMQ9H3K2 345 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 NOX3Q9HBY0 568 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 TMEM138Q9NPI0 162 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 FANCFQ9NPI8 374 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 SLC22A11Q9NSA0 550 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 HPF1Q9NWY4 346 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 DUX4Q9UBX2 424 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 MTFP1Q9UDX5 166 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 RAB22AQ9UL26 194 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 MGAT4AQ9UM21 535 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 PTRH2Q9Y3E5 179 aaKnown RBP5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 SCN2AQ99250 2005 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 CACNA1BQ00975 2339 aa5.22□□□□□ -1.57
ATPAF1-204ENST00000474020 SPAG17Q6Q759 2223 aa5.21□□□□□ -1.57
ATPAF1-204ENST00000474020 TRAV8-7A0A075B6U6 113 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 LOC102723996A0A087X1L8 192 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 NSG1A0A0A6YYJ2 146 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms