RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, human

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-223	ENST00000472807	EGLN3	Q9H6Z9	239 aa		7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807	WDR76	Q9H967	626 aa		7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807	NTN4	Q9HB63	628 aa		7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807	TBC1D23	Q9NUY8	699 aa		7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807	TMEM100	Q9NV29	134 aa		7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807	NOP16	Q9Y3C1	178 aa	Known RBP	7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807	LYVE1	Q9Y5Y7	322 aa		7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807	DOCK11	Q5JSL3	2073 aa		7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807	IGHV3-64D	A0A0J9YX35	117 aa		7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807		H0YL77	283 aa		7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807		M0R135	149 aa		7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	BHLHE40	O14503	412 aa		7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	MLNR	O43193	412 aa		7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	CCNB2	O95067	398 aa		7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	CYB5R3	P00387	301 aa	Predicted RBP	7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	HLA-DPB1	P04440	258 aa		7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	IRF2	P14316	349 aa		7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	ZNF12	P17014	697 aa		7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	ATP6V1B2	P21281	511 aa		7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	CFP	P27918	469 aa		7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	GGT2	P36268	569 aa		7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	RBMX	P38159	391 aa	Known RBP	7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	MAGEA2	P43356	314 aa		7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	COMP	P49747	757 aa	Predicted RBP	7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	RAD23A	P54725	363 aa		7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	DBP	Q10586	325 aa	Predicted RBP	7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	GK2	Q14410	553 aa	Predicted RBP	7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	ZNF181	Q2M3W8	571 aa		7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	BTNL3	Q6UXE8	466 aa		7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	COLCA1	Q6ZS62	124 aa		7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	NLRC3	Q7RTR2	1065 aa		7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	MRPL21	Q7Z2W9	205 aa	Known RBP	7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	CYB561A3	Q8NBI2	242 aa		7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	OR11L1	Q8NGX0	322 aa		7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	OR2T4	Q8NH00	348 aa		7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	ZNF420	Q8TAQ5	688 aa	Predicted RBP	7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	SPRYD4	Q8WW59	207 aa	Predicted RBP	7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	C22orf15	Q8WYQ4	148 aa		7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	ZMYND19	Q96E35	227 aa	Predicted RBP	7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	ZNF799	Q96GE5	643 aa		7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	PLEKHA8	Q96JA3	519 aa		7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	BTBD10	Q9BSF8	475 aa		7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	SSBP3	Q9BWW4	388 aa	Predicted RBP	7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	TRIM15	Q9C019	465 aa		7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	SLC22A4	Q9H015	551 aa		7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	MUC13	Q9H3R2	512 aa		7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	PNRC2	Q9NPJ4	139 aa	Known RBP	7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	MMP26	Q9NRE1	261 aa		7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	MRPL22	Q9NWU5	206 aa	Known RBP	7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	ACTR3B	Q9P1U1	418 aa		7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	MIOX	Q9UGB7	285 aa		7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	NUP50	Q9UKX7	468 aa		7.49	□□□□□ -1.21
CHEK2-223	ENST00000472807	PKD1L1	Q8TDX9	2849 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807		A0A1B0GWJ7	208 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	TMEM89	A2RUT3	159 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	TVP23A	A6NH52	213 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	TRAPPC2L	H3BP13	241 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	ZNF205	O95201	554 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	FSTL3	O95633	263 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	PYCR1	P32322	319 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	GATA4	P43694	442 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	HMGA2	P52926	109 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	GYS2	P54840	703 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	PRSS12	P56730	875 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	GNB2	P62879	340 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	UBA52	P62987	128 aa	Known RBP	7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	OR8G1	Q15617	311 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	RSPO1	Q2MKA7	263 aa	Predicted RBP	7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	ZNF404	Q494X3	552 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	FAM98B	Q52LJ0	330 aa	Known RBP	7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	LRRN1	Q6UXK5	716 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	RASSF6	Q6ZTQ3	369 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	PIGW	Q7Z7B1	504 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	KLB	Q86Z14	1044 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	ARHGAP24	Q8N264	748 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	CELF2-AS1	Q8N7Q2	184 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	SIGLECL1	Q8N7X8	197 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	C3orf56	Q8N813	242 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	AQP11	Q8NBQ7	271 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	SLC37A3	Q8NCC5	494 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	OR2T33	Q8NG76	320 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	OR8B3	Q8NGG8	313 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807		Q8TCH9	128 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	DVL3	Q92997	716 aa	Predicted RBP	7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	ERGIC1	Q969X5	290 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	SLCO4A1	Q96BD0	722 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	NEIL1	Q96FI4	390 aa	Predicted RBP	7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	MAP6	Q96JE9	813 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	OR8B2	Q96RD0	313 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	COPS4	Q9BT78	406 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	ADAT1	Q9BUB4	502 aa	Known RBP	7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	PLA2G12A	Q9BZM1	189 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	OPA3	Q9H6K4	179 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	MAGIX	Q9H6Y5	334 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	ZMAT3	Q9HA38	289 aa	Known RBP	7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	TMEM165	Q9HC07	324 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	ESM1	Q9NQ30	184 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	DDX28	Q9NUL7	540 aa	Known RBP	7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	IL20	Q9NYY1	176 aa		7.48	□□□□□ -1.21
CHEK2-223	ENST00000472807	BAIAP2	Q9UQB8	552 aa		7.48	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms