RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 VSIG8P0DPA2 414 aa13.28□□□□□ -0.28
UBXN11-213ENST00000472155 GABRA1P14867 456 aa13.28□□□□□ -0.28
UBXN11-213ENST00000472155 BDKRB2P30411 391 aa13.28□□□□□ -0.28
UBXN11-213ENST00000472155 SSR4P51571 173 aa13.28□□□□□ -0.28
UBXN11-213ENST00000472155 H3F3AP84243 136 aa13.28□□□□□ -0.28
UBXN11-213ENST00000472155 NKPD1Q17RQ9 610 aa13.28□□□□□ -0.28
UBXN11-213ENST00000472155 THOC7Q6I9Y2 204 aaKnown RBP13.28□□□□□ -0.28
UBXN11-213ENST00000472155 OR52W1Q6IF63 320 aa13.28□□□□□ -0.28
UBXN11-213ENST00000472155 YRDCQ86U90 279 aaKnown RBP13.28□□□□□ -0.28
UBXN11-213ENST00000472155 GTPBP8Q8N3Z3 284 aaPredicted RBP13.28□□□□□ -0.28
UBXN11-213ENST00000472155 FTMTQ8N4E7 242 aa13.28□□□□□ -0.28
UBXN11-213ENST00000472155 OR1M1Q8NGA1 313 aa13.28□□□□□ -0.28
UBXN11-213ENST00000472155 OR2AJ1Q8NGZ0 328 aa13.28□□□□□ -0.28
UBXN11-213ENST00000472155 NUDCD2Q8WVJ2 157 aa13.28□□□□□ -0.28
UBXN11-213ENST00000472155 C17orf50Q8WW18 174 aa13.28□□□□□ -0.28
UBXN11-213ENST00000472155 ANGPTL4Q9BY76 406 aa13.28□□□□□ -0.28
UBXN11-213ENST00000472155 SCP2D1Q9UJQ7 156 aa13.28□□□□□ -0.28
UBXN11-213ENST00000472155 NXT1Q9UKK6 140 aaKnown RBP13.28□□□□□ -0.28
UBXN11-213ENST00000472155 FARSAQ9Y285 508 aaKnown RBP13.28□□□□□ -0.28
UBXN11-213ENST00000472155 DMXL1Q9Y485 3027 aa13.28□□□□□ -0.28
UBXN11-213ENST00000472155 OR5H15A6NDH6 313 aa13.27□□□□□ -0.28
UBXN11-213ENST00000472155 ZNF726A6NNF4 738 aa13.27□□□□□ -0.28
UBXN11-213ENST00000472155 RAB27BO00194 218 aa13.27□□□□□ -0.28
UBXN11-213ENST00000472155 ALX3O95076 343 aa13.27□□□□□ -0.28
UBXN11-213ENST00000472155 CER1O95813 267 aa13.27□□□□□ -0.28
UBXN11-213ENST00000472155 AKAIN1P0CW23 69 aa13.27□□□□□ -0.28
UBXN11-213ENST00000472155 PSMA6P60900 246 aaKnown RBP13.27□□□□□ -0.28
UBXN11-213ENST00000472155 RBMS2Q15434 407 aaKnown RBP13.27□□□□□ -0.28
UBXN11-213ENST00000472155 PLXDC2Q6UX71 529 aa13.27□□□□□ -0.28
UBXN11-213ENST00000472155 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.27□□□□□ -0.28
UBXN11-213ENST00000472155 TMEM104Q8NE00 496 aa13.27□□□□□ -0.28
UBXN11-213ENST00000472155 NPRL2Q8WTW4 380 aa13.27□□□□□ -0.28
UBXN11-213ENST00000472155 UTP23Q9BRU9 249 aaKnown RBP13.27□□□□□ -0.28
UBXN11-213ENST00000472155 COL27A1Q8IZC6 1860 aaPredicted RBP13.27□□□□□ -0.28
UBXN11-213ENST00000472155 ZNF878C9JN71 531 aa13.27□□□□□ -0.29
UBXN11-213ENST00000472155 CREBL2O60519 120 aaPredicted RBP13.27□□□□□ -0.29
UBXN11-213ENST00000472155 STK17BO94768 372 aa13.27□□□□□ -0.29
UBXN11-213ENST00000472155 DBHP09172 617 aa13.27□□□□□ -0.29
UBXN11-213ENST00000472155 TAF13Q15543 124 aa13.27□□□□□ -0.29
UBXN11-213ENST00000472155 OPN5Q6U736 354 aa13.27□□□□□ -0.29
UBXN11-213ENST00000472155 TEX261Q6UWH6 196 aa13.27□□□□□ -0.29
UBXN11-213ENST00000472155 CD163Q86VB7 1156 aa13.27□□□□□ -0.29
UBXN11-213ENST00000472155 PAQR8Q8TEZ7 354 aa13.27□□□□□ -0.29
UBXN11-213ENST00000472155 THRSPQ92748 146 aa13.27□□□□□ -0.29
UBXN11-213ENST00000472155 SH2D2AQ9NP31 389 aa13.27□□□□□ -0.29
UBXN11-213ENST00000472155 HPF1Q9NWY4 346 aa13.27□□□□□ -0.29
UBXN11-213ENST00000472155 FBXO4Q9UKT5 387 aa13.27□□□□□ -0.29
UBXN11-213ENST00000472155 HDGFL3Q9Y3E1 203 aa13.27□□□□□ -0.29
UBXN11-213ENST00000472155 U3KQ87 197 aa13.27□□□□□ -0.29
UBXN11-213ENST00000472155 MED13Q9UHV7 2174 aa13.27□□□□□ -0.29
UBXN11-213ENST00000472155 PRAF2O60831 178 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 GNB3P16520 340 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 OR3A4PP47883 348 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 CX3CR1P49238 355 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 STARP49675 285 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 TSPAN5P62079 268 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 QRFPP83859 136 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 ZBTB37Q5TC79 503 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 PPP1R32Q7Z5V6 425 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 OR5AS1Q8N127 324 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 CHST4Q8NCG5 386 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 ADPRHL1Q8NDY3 354 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 ZNF680Q8NEM1 530 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 ZC3H10Q96K80 434 aaKnown RBP13.26□□□□□ -0.29
UBXN11-213ENST00000472155 GLTPQ9NZD2 209 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 FREM1Q5H8C1 2179 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 A0A0A6YYD4 124 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 LPLP06858 475 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 CXCL2P19875 107 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 FOLR3P41439 243 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 EIF1P41567 113 aaKnown RBP13.26□□□□□ -0.29
UBXN11-213ENST00000472155 MLF1P58340 268 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 RSPO1Q2MKA7 263 aaPredicted RBP13.26□□□□□ -0.29
UBXN11-213ENST00000472155 SLC23A3Q6PIS1 610 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 TMED4Q7Z7H5 227 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 ANGPTL5Q86XS5 388 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 ZIC4Q8N9L1 334 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 OR5D18Q8NGL1 313 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 OR6N1Q8NGY5 312 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 ZBTB8AQ96BR9 441 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 SORCS2Q96PQ0 1159 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 SLC6A7Q99884 636 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 IRF2BPLQ9H1B7 796 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 POFUT1Q9H488 388 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 BANF2Q9H503 90 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 SLC17A5Q9NRA2 495 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 DKKL1Q9UK85 242 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 RAB3DO95716 219 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 AMY2AP04746 511 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 TPOP07202 933 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 ZNF735P0CB33 412 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 ADH6P28332 368 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 SLC35A1P78382 337 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 EXT1Q16394 746 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 SCGB2B2Q4G0G5 96 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 TMEM81Q6P7N7 255 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 IDO2Q6ZQW0 420 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 CHMP1BQ7LBR1 199 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 FJX1Q86VR8 437 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 ZNF283Q8N7M2 679 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms