RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 SLC22A5O76082 557 aa2.15□□□□□ -2.07
PTCD3-209ENST00000472044 RCBTB2O95199 551 aa2.15□□□□□ -2.07
PTCD3-209ENST00000472044 MPZL1O95297 269 aa2.15□□□□□ -2.07
PTCD3-209ENST00000472044 CCNE2O96020 404 aa2.15□□□□□ -2.07
PTCD3-209ENST00000472044 TACSTD2P09758 323 aa2.15□□□□□ -2.07
PTCD3-209ENST00000472044 POLR2MP0CAP2 368 aa2.15□□□□□ -2.07
PTCD3-209ENST00000472044 CSNK2A2P19784 350 aaPredicted RBP2.15□□□□□ -2.07
PTCD3-209ENST00000472044 IL32P24001 234 aa2.15□□□□□ -2.07
PTCD3-209ENST00000472044 CRADDP78560 199 aa2.15□□□□□ -2.07
PTCD3-209ENST00000472044 RAD51Q06609 339 aa2.15□□□□□ -2.07
PTCD3-209ENST00000472044 ZNF816Q0VGE8 651 aaPredicted RBP2.15□□□□□ -2.07
PTCD3-209ENST00000472044 ART3Q13508 389 aa2.15□□□□□ -2.07
PTCD3-209ENST00000472044 COX19Q49B96 90 aa2.15□□□□□ -2.07
PTCD3-209ENST00000472044 MPV17L2Q567V2 206 aa2.15□□□□□ -2.07
PTCD3-209ENST00000472044 ADNP2Q6IQ32 1131 aa2.15□□□□□ -2.07
PTCD3-209ENST00000472044 H3F3CQ6NXT2 135 aa2.15□□□□□ -2.07
PTCD3-209ENST00000472044 ZNF880Q6PDB4 577 aa2.15□□□□□ -2.07
PTCD3-209ENST00000472044 CLEC2AQ6UVW9 174 aa2.15□□□□□ -2.07
PTCD3-209ENST00000472044 C12orf54Q6X4T0 127 aa2.15□□□□□ -2.07
PTCD3-209ENST00000472044 KRTAP5-2Q701N4 177 aa2.15□□□□□ -2.07
PTCD3-209ENST00000472044 WDFY1Q8IWB7 410 aa2.15□□□□□ -2.07
PTCD3-209ENST00000472044 KATNAL2Q8IYT4 538 aa2.15□□□□□ -2.07
PTCD3-209ENST00000472044 ZNF615Q8N8J6 731 aa2.15□□□□□ -2.07
PTCD3-209ENST00000472044 ZNF709Q8N972 641 aa2.15□□□□□ -2.07
PTCD3-209ENST00000472044 OR52E5Q8NH55 327 aa2.15□□□□□ -2.07
PTCD3-209ENST00000472044 LILRB4Q8NHJ6 448 aa2.15□□□□□ -2.07
PTCD3-209ENST00000472044 LINC01560Q8TB33 94 aa2.15□□□□□ -2.07
PTCD3-209ENST00000472044 OR51E1Q8TCB6 317 aa2.15□□□□□ -2.07
PTCD3-209ENST00000472044 RPEQ96AT9 228 aa2.15□□□□□ -2.07
PTCD3-209ENST00000472044 NEURL3Q96EH8 262 aa2.15□□□□□ -2.07
PTCD3-209ENST00000472044 L3HYPDHQ96EM0 354 aa2.15□□□□□ -2.07
PTCD3-209ENST00000472044 OR10C1Q96KK4 312 aa2.15□□□□□ -2.07
PTCD3-209ENST00000472044 LINC00477Q96M19 166 aa2.15□□□□□ -2.07
PTCD3-209ENST00000472044 CALN1Q9BXU9 219 aa2.15□□□□□ -2.07
PTCD3-209ENST00000472044 TMEM27Q9HBJ8 222 aa2.15□□□□□ -2.07
PTCD3-209ENST00000472044 SLC17A7Q9P2U7 560 aa2.15□□□□□ -2.07
PTCD3-209ENST00000472044 ZNF835Q9Y2P0 537 aa2.15□□□□□ -2.07
PTCD3-209ENST00000472044 CAB39Q9Y376 341 aaPredicted RBP2.15□□□□□ -2.07
PTCD3-209ENST00000472044 NOTCH2Q04721 2471 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 TRAV40A0A0B4J280 105 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 A0A1W2PRD5 423 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 C7orf66A4D0T2 115 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 SYCE1LA8MT33 242 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 TEX46H3BTG2 121 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 NME4O00746 187 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 BCKDKO14874 412 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 NVLO15381 856 aaKnown RBP2.14□□□□□ -2.07
PTCD3-209ENST00000472044 ERI3O43414 337 aaKnown RBP2.14□□□□□ -2.07
PTCD3-209ENST00000472044 OXTP01178 125 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 IFNW1P05000 195 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 ZNF688P0C7X2 276 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 ZNF286BP0CG31 522 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 UBCP0CG48 685 aaKnown RBP2.14□□□□□ -2.07
PTCD3-209ENST00000472044 PFN2P35080 140 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 RFC3P40938 356 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 NBL1P41271 181 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 RPS5P46782 204 aaKnown RBP2.14□□□□□ -2.07
PTCD3-209ENST00000472044 SLC11A1P49279 550 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 FABP6P51161 128 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 CDK5Q00535 292 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 CDC20Q12834 499 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 DGCR6Q14129 220 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 TRMT5Q32P41 509 aaKnown RBP2.14□□□□□ -2.07
PTCD3-209ENST00000472044 SAXO2Q658L1 398 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 ZFP1Q6P2D0 407 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 HORMAD1Q86X24 394 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 NKAIN4Q8IVV8 208 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 ZNF561Q8N587 486 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 GATSQ8NAP1 163 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 BPIFCQ8NFQ6 507 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 GLYATL2Q8WU03 294 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 RBMXL1Q96E39 390 aaKnown RBP2.14□□□□□ -2.07
PTCD3-209ENST00000472044 C9orf72Q96LT7 481 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 DOK1Q99704 481 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 LCE3DQ9BYE3 92 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 FGF23Q9GZV9 251 aaPredicted RBP2.14□□□□□ -2.07
PTCD3-209ENST00000472044 C1orf198Q9H425 327 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 PIGUQ9H490 435 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 BEX1Q9HBH7 125 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 EXOSC4Q9NPD3 245 aaKnown RBP2.14□□□□□ -2.07
PTCD3-209ENST00000472044 SLC39A1Q9NY26 324 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 PDP1Q9P0J1 537 aaPredicted RBP2.14□□□□□ -2.07
PTCD3-209ENST00000472044 PCDH11XQ9BZA7 1347 aa2.14□□□□□ -2.07
PTCD3-209ENST00000472044 IGLV2-18A0A075B6J9 118 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 TRAV19A0A0A6YYK7 116 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 IGHV1-69DA0A0B4J2H0 117 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 LRRIQ4A6NIV6 560 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 KRBOX1C9JBD0 128 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 H0YIV9 168 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 GOLGA8TH3BQL2 631 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 TNFRSF11BO00300 401 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 PLPP1O14494 284 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 TAAR5O14804 337 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 RRP8O43159 456 aaKnown RBP2.13□□□□□ -2.07
PTCD3-209ENST00000472044 CHST10O43529 356 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 FOXH1O75593 365 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 RBBP9O75884 186 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 GLSO94925 669 aaPredicted RBP2.13□□□□□ -2.07
PTCD3-209ENST00000472044 GLAP06280 429 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 ASGR1P07306 291 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms