RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 LCATP04180 440 aa12.89□□□□□ -0.35
COL1A1-203ENST00000471344 CLUP10909 449 aa12.89□□□□□ -0.35
COL1A1-203ENST00000471344 SLC6A9P48067 706 aa12.89□□□□□ -0.35
COL1A1-203ENST00000471344 CRMP1Q14194 572 aa12.89□□□□□ -0.35
COL1A1-203ENST00000471344 SNAI3Q3KNW1 292 aa12.89□□□□□ -0.35
COL1A1-203ENST00000471344 SLC36A3Q495N2 470 aa12.89□□□□□ -0.35
COL1A1-203ENST00000471344 TMEM155Q4W5P6 130 aa12.89□□□□□ -0.35
COL1A1-203ENST00000471344 LCN8Q6JVE9 175 aa12.89□□□□□ -0.35
COL1A1-203ENST00000471344 ARHGAP24Q8N264 748 aa12.89□□□□□ -0.35
COL1A1-203ENST00000471344 SPICQ8N5J4 248 aa12.89□□□□□ -0.35
COL1A1-203ENST00000471344 OR52L1Q8NGH7 329 aa12.89□□□□□ -0.35
COL1A1-203ENST00000471344 OR2AJ1Q8NGZ0 328 aa12.89□□□□□ -0.35
COL1A1-203ENST00000471344 OR13G1Q8NGZ3 307 aa12.89□□□□□ -0.35
COL1A1-203ENST00000471344 ESM1Q9NQ30 184 aa12.89□□□□□ -0.35
COL1A1-203ENST00000471344 TBC1D23Q9NUY8 699 aa12.89□□□□□ -0.35
COL1A1-203ENST00000471344 IL20Q9NYY1 176 aa12.89□□□□□ -0.35
COL1A1-203ENST00000471344 COMMD3-BMI1R4GMX3 469 aa12.89□□□□□ -0.35
COL1A1-203ENST00000471344 HAX1O00165 279 aa12.88□□□□□ -0.35
COL1A1-203ENST00000471344 SURF4O15260 269 aa12.88□□□□□ -0.35
COL1A1-203ENST00000471344 FOXH1O75593 365 aa12.88□□□□□ -0.35
COL1A1-203ENST00000471344 HILS1P60008 231 aa12.88□□□□□ -0.35
COL1A1-203ENST00000471344 RASSF6Q6ZTQ3 369 aa12.88□□□□□ -0.35
COL1A1-203ENST00000471344 KLHL36Q8N4N3 616 aa12.88□□□□□ -0.35
COL1A1-203ENST00000471344 C19orf18Q8NEA5 215 aa12.88□□□□□ -0.35
COL1A1-203ENST00000471344 OR2AE1Q8NHA4 323 aa12.88□□□□□ -0.35
COL1A1-203ENST00000471344 ZNF418Q8TF45 676 aaPredicted RBP12.88□□□□□ -0.35
COL1A1-203ENST00000471344 DVL3Q92997 716 aaPredicted RBP12.88□□□□□ -0.35
COL1A1-203ENST00000471344 SLCO4A1Q96BD0 722 aa12.88□□□□□ -0.35
COL1A1-203ENST00000471344 CCDC124Q96CT7 223 aaKnown RBP12.88□□□□□ -0.35
COL1A1-203ENST00000471344 RBM4Q9BWF3 364 aaKnown RBP12.88□□□□□ -0.35
COL1A1-203ENST00000471344 TSSK6Q9BXA6 273 aa12.88□□□□□ -0.35
COL1A1-203ENST00000471344 TRIM15Q9C019 465 aa12.88□□□□□ -0.35
COL1A1-203ENST00000471344 A0A0A6YYJ9 748 aa12.87□□□□□ -0.35
COL1A1-203ENST00000471344 A0A1B0GWJ7 208 aa12.87□□□□□ -0.35
COL1A1-203ENST00000471344 M0R135 149 aa12.87□□□□□ -0.35
COL1A1-203ENST00000471344 ZNF823P16415 610 aa12.87□□□□□ -0.35
COL1A1-203ENST00000471344 MDH2P40926 338 aaKnown RBP12.87□□□□□ -0.35
COL1A1-203ENST00000471344 MAB21L1Q13394 359 aa12.87□□□□□ -0.35
COL1A1-203ENST00000471344 KLF17Q5JT82 389 aaPredicted RBP12.87□□□□□ -0.35
COL1A1-203ENST00000471344 PRAMEF6Q5VXH4 476 aa12.87□□□□□ -0.35
COL1A1-203ENST00000471344 DCXRQ7Z4W1 244 aa12.87□□□□□ -0.35
COL1A1-203ENST00000471344 DHFR2Q86XF0 187 aa12.87□□□□□ -0.35
COL1A1-203ENST00000471344 LNX2Q8N448 690 aa12.87□□□□□ -0.35
COL1A1-203ENST00000471344 LINC00471Q8N535 108 aa12.87□□□□□ -0.35
COL1A1-203ENST00000471344 ZNF511Q8NB15 262 aa12.87□□□□□ -0.35
COL1A1-203ENST00000471344 NANPQ8TBE9 248 aa12.87□□□□□ -0.35
COL1A1-203ENST00000471344 ZNF799Q96GE5 643 aa12.87□□□□□ -0.35
COL1A1-203ENST00000471344 NIPSNAP1Q9BPW8 284 aa12.87□□□□□ -0.35
COL1A1-203ENST00000471344 HCAR1Q9BXC0 346 aa12.87□□□□□ -0.35
COL1A1-203ENST00000471344 MUC13Q9H3R2 512 aa12.87□□□□□ -0.35
COL1A1-203ENST00000471344 MAGIXQ9H6Y5 334 aa12.87□□□□□ -0.35
COL1A1-203ENST00000471344 MED20Q9H944 212 aa12.87□□□□□ -0.35
COL1A1-203ENST00000471344 TMEM165Q9HC07 324 aa12.87□□□□□ -0.35
COL1A1-203ENST00000471344 SAMHD1Q9Y3Z3 626 aaKnown RBP12.87□□□□□ -0.35
COL1A1-203ENST00000471344 A8MXK9 166 aa12.86□□□□□ -0.35
COL1A1-203ENST00000471344 SPARCP09486 303 aa12.86□□□□□ -0.35
COL1A1-203ENST00000471344 SLC2A1P11166 492 aa12.86□□□□□ -0.35
COL1A1-203ENST00000471344 ZNF12P17014 697 aa12.86□□□□□ -0.35
COL1A1-203ENST00000471344 SPI1P17947 270 aa12.86□□□□□ -0.35
COL1A1-203ENST00000471344 GATA3P23771 443 aa12.86□□□□□ -0.35
COL1A1-203ENST00000471344 SRP9P49458 86 aaKnown RBP12.86□□□□□ -0.35
COL1A1-203ENST00000471344 ZNF92Q03936 586 aa12.86□□□□□ -0.35
COL1A1-203ENST00000471344 BNIP1Q12981 228 aa12.86□□□□□ -0.35
COL1A1-203ENST00000471344 ECH1Q13011 328 aa12.86□□□□□ -0.35
COL1A1-203ENST00000471344 ZNF154Q13106 437 aa12.86□□□□□ -0.35
COL1A1-203ENST00000471344 TRIM25Q14258 630 aaKnown RBP12.86□□□□□ -0.35
COL1A1-203ENST00000471344 MPPED2Q15777 294 aa12.86□□□□□ -0.35
COL1A1-203ENST00000471344 GLYATL3Q5SZD4 288 aa12.86□□□□□ -0.35
COL1A1-203ENST00000471344 OR2T5Q6IEZ7 315 aa12.86□□□□□ -0.35
COL1A1-203ENST00000471344 RPL13AP3Q6NVV1 102 aa12.86□□□□□ -0.35
COL1A1-203ENST00000471344 SLC27A4Q6P1M0 643 aa12.86□□□□□ -0.35
COL1A1-203ENST00000471344 SPATC1Q76KD6 591 aa12.86□□□□□ -0.35
COL1A1-203ENST00000471344 IQCF1Q8N6M8 205 aa12.86□□□□□ -0.35
COL1A1-203ENST00000471344 OR2T4Q8NH00 348 aa12.86□□□□□ -0.35
COL1A1-203ENST00000471344 OR2T29Q8NH02 315 aa12.86□□□□□ -0.35
COL1A1-203ENST00000471344 POP5Q969H6 163 aaKnown RBP12.86□□□□□ -0.35
COL1A1-203ENST00000471344 TMEM246Q9BRR3 403 aa12.86□□□□□ -0.35
COL1A1-203ENST00000471344 THTPAQ9BU02 230 aa12.86□□□□□ -0.35
COL1A1-203ENST00000471344 NMNAT2Q9BZQ4 307 aa12.86□□□□□ -0.35
COL1A1-203ENST00000471344 C1orf21Q9H246 121 aa12.86□□□□□ -0.35
COL1A1-203ENST00000471344 DDX28Q9NUL7 540 aaKnown RBP12.86□□□□□ -0.35
COL1A1-203ENST00000471344 UFSP2Q9NUQ7 469 aa12.86□□□□□ -0.35
COL1A1-203ENST00000471344 TMEM100Q9NV29 134 aa12.86□□□□□ -0.35
COL1A1-203ENST00000471344 POLR3KQ9Y2Y1 108 aaPredicted RBP12.86□□□□□ -0.35
COL1A1-203ENST00000471344 INSIG2Q9Y5U4 225 aa12.86□□□□□ -0.35
COL1A1-203ENST00000471344 PPIAL4EA0A075B759 164 aa12.85□□□□□ -0.35
COL1A1-203ENST00000471344 PPIAL4CA0A0B4J2A2 164 aa12.85□□□□□ -0.35
COL1A1-203ENST00000471344 PPIAL4DF5H284 164 aa12.85□□□□□ -0.35
COL1A1-203ENST00000471344 WNT2P09544 360 aa12.85□□□□□ -0.35
COL1A1-203ENST00000471344 PPIAL4FP0DN26 164 aa12.85□□□□□ -0.35
COL1A1-203ENST00000471344 RPS2P15880 293 aaKnown RBP12.85□□□□□ -0.35
COL1A1-203ENST00000471344 CA6P23280 308 aa12.85□□□□□ -0.35
COL1A1-203ENST00000471344 OTX1P32242 354 aaPredicted RBP12.85□□□□□ -0.35
COL1A1-203ENST00000471344 PRKXP51817 358 aa12.85□□□□□ -0.35
COL1A1-203ENST00000471344 TPTEP56180 551 aa12.85□□□□□ -0.35
COL1A1-203ENST00000471344 ACTG1P63261 375 aa12.85□□□□□ -0.35
COL1A1-203ENST00000471344 PAX2Q02962 417 aa12.85□□□□□ -0.35
COL1A1-203ENST00000471344 SCGB2A2Q13296 93 aa12.85□□□□□ -0.35
COL1A1-203ENST00000471344 MICAQ29983 383 aa12.85□□□□□ -0.35
COL1A1-203ENST00000471344 ESCO2Q56NI9 601 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms