RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 RDH16O75452 317 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 CLN5O75503 358 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 ANP32DO95626 131 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 FHP07954 510 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 IFI6P09912 130 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 SLC35E2P0CK97 266 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 CCL4P13236 92 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 CD1EP15812 388 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 UQCRC2P22695 453 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 PPIBP23284 216 aaKnown RBP3.97□□□□□ -1.77
CCDC39-202ENST00000471307 PTPN6P29350 595 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 NTSP30990 170 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 SRD5A2P31213 254 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 OTX2P32243 289 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 RORAP35398 523 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 MAGEA8P43361 318 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 XCR1P46094 333 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 OR1D4P47884 311 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 NUDT2P50583 147 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 XKP51811 444 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 PSME3P61289 254 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 NCALDP61601 193 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 GPR50Q13585 617 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 SERTAD2Q14140 314 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 CAPRIN1Q14444 709 aaKnown RBP3.97□□□□□ -1.77
CCDC39-202ENST00000471307 ZMYND11Q15326 602 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 TRMT5Q32P41 509 aaKnown RBP3.97□□□□□ -1.77
CCDC39-202ENST00000471307 SLC36A3Q495N2 470 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 NADK2Q4G0N4 442 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 NKAIN1Q4KMZ8 207 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 TMEM41BQ5BJD5 291 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 PAGE3Q5JUK9 113 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 HES3Q5TGS1 186 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 REP15Q6BDI9 236 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 NANOGP8Q6NSW7 305 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 ZNF621Q6ZSS3 439 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 ARPINQ7Z6K5 226 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 PGAM4Q8N0Y7 254 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 PLPP5Q8NEB5 264 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 OR8J3Q8NGG0 315 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 OR5T3Q8NGG3 340 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 OR52B4Q8NGK2 314 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 OR6T1Q8NGN1 323 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 MCUR1Q96AQ8 359 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 EXOSC8Q96B26 276 aaKnown RBP3.97□□□□□ -1.77
CCDC39-202ENST00000471307 LRRC58Q96CX6 371 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 BPIFA2Q96DR5 249 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 ZNF681Q96N22 645 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 AMDHD1Q96NU7 426 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 PANX1Q96RD7 426 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 CGREF1Q99674 301 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 NPAS2Q99743 824 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 PELOQ9BRX2 385 aaKnown RBP3.97□□□□□ -1.77
CCDC39-202ENST00000471307 DDA1Q9BW61 102 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 SLC26A1Q9H2B4 701 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 NANOGQ9H9S0 305 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 APMAPQ9HDC9 416 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 RAB9BQ9NP90 201 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 PRTFDC1Q9NRG1 225 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 ACOXLQ9NUZ1 547 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 C14orf105Q9NVL8 296 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 DHCR7Q9UBM7 475 aaKnown RBP3.97□□□□□ -1.77
CCDC39-202ENST00000471307 ZNF282Q9UDV7 671 aaPredicted RBP3.97□□□□□ -1.77
CCDC39-202ENST00000471307 PRPF19Q9UMS4 504 aaKnown RBP3.97□□□□□ -1.77
CCDC39-202ENST00000471307 MMACHCQ9Y4U1 282 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 CCDC88CQ9P219 2028 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 DMXL1Q9Y485 3027 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 PIEZO1Q92508 2521 aa3.96□□□□□ -1.77
CCDC39-202ENST00000471307 TEX48A0A1B0GUV7 120 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 VSTM2BA6NLU5 285 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 WASHC1A8K0Z3 465 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 NVLO15381 856 aaKnown RBP3.96□□□□□ -1.78
CCDC39-202ENST00000471307 B4GALT2O60909 372 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 ZNF253O75346 499 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 CPSF4O95639 269 aaKnown RBP3.96□□□□□ -1.78
CCDC39-202ENST00000471307 KRT75O95678 551 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 C6orf47O95873 294 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 RRASP10301 218 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 SFTPCP11686 197 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 CPMP14384 443 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 GPX2P18283 190 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 CD82P27701 267 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 OR3A1P47881 315 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 CCT3P49368 545 aaKnown RBP3.96□□□□□ -1.78
CCDC39-202ENST00000471307 NOVA1P51513 510 aaKnown RBP3.96□□□□□ -1.78
CCDC39-202ENST00000471307 NCBP2P52298 156 aaKnown RBP eCLIP3.96□□□□□ -1.78
CCDC39-202ENST00000471307 RPS27AP62979 156 aaKnown RBP3.96□□□□□ -1.78
CCDC39-202ENST00000471307 HBA1P69905 142 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 STX4Q12846 297 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 CEACAM7Q14002 265 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 SAMD4BQ5PRF9 694 aaKnown RBP3.96□□□□□ -1.78
CCDC39-202ENST00000471307 C1orf189Q5VU69 101 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 ANKRD26P1Q6NSI1 321 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 TMEM64Q6YI46 380 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 SIGLEC15Q6ZMC9 328 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 DHDDSQ86SQ9 333 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 STHQ8IWL8 128 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 C10orf67Q8IYJ2 551 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 DEFB107AQ8IZN7 70 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 ST13P4Q8IZP2 240 aaPredicted RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms