RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 FAM122AQ96E09 287 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 ADGRG7Q96K78 797 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 CMKLR1Q99788 373 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 RARRES2Q99969 163 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 FAM83CQ9BQN1 747 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 GLIPR2Q9H4G4 154 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 CAPN10Q9HC96 672 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 SLC2A4RGQ9NR83 387 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 TUBG2Q9NRH3 451 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 FOXJ2Q9P0K8 574 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 FBXL17Q9UF56 701 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 ZNF346Q9UL40 294 aaKnown RBP3.8□□□□□ -1.8
VPS50-210ENST00000471188 RPH3ALQ9UNE2 315 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 PLXNA4Q9HCM2 1894 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 A0A1W2PPQ1 181 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 PRAMEF26H0Y7S4 382 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 M0QZK8 103 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 PLPP1O14494 284 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 TSPAN6O43657 245 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 GGCTO75223 188 aaKnown RBP3.8□□□□□ -1.8
VPS50-210ENST00000471188 JTBO76095 146 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 DUS4LO95620 317 aaKnown RBP3.8□□□□□ -1.8
VPS50-210ENST00000471188 SNAI1O95863 264 aaPredicted RBP3.8□□□□□ -1.8
VPS50-210ENST00000471188 CST4P01036 141 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 MMP3P08254 477 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 JMJD7P0C870 316 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 IRF2P14316 349 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 DPEP1P16444 411 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 SELEP16581 610 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 TBPP20226 339 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 FCGR2CP31995 323 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 SSR2P43308 183 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 GATMP50440 423 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 IDH3GP51553 393 aaPredicted RBP3.8□□□□□ -1.8
VPS50-210ENST00000471188 GAGE1Q13065 139 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 IQCJQ1A5X6 159 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 ZNF468Q5VIY5 522 aaPredicted RBP3.8□□□□□ -1.8
VPS50-210ENST00000471188 TEX38Q6PEX7 206 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 VITQ6UXI7 678 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 UNQ9370/PRO34162Q6UXP9 181 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 P4HA3Q7Z4N8 544 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 ZNF101Q8IZC7 436 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 GVQW1Q8N7I0 195 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 ACOT4Q8N9L9 421 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 OR10AC1Q8NH08 325 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 PPTC7Q8NI37 304 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 ADAMTS15Q8TE58 950 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 ZNF480Q8WV37 535 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 TM4SF18Q96CE8 201 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 ADAD1Q96M93 576 aaKnown RBP3.8□□□□□ -1.8
VPS50-210ENST00000471188 WFIKKN1Q96NZ8 548 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 PRAP1Q96NZ9 151 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 TNFRSF13CQ96RJ3 184 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 NIPSNAP3BQ9BS92 247 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 SGPP1Q9BX95 441 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 SLC5A7Q9GZV3 580 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 COMMD4Q9H0A8 199 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 LPAR2Q9HBW0 351 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 GPR173Q9NS66 373 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 SLC2A8Q9NY64 477 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 LHX3Q9UBR4 397 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 GAB2Q9UQC2 676 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 STARD10Q9Y365 291 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 MED31Q9Y3C7 131 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 LSM5Q9Y4Y9 91 aaKnown RBP3.8□□□□□ -1.8
VPS50-210ENST00000471188 KIAA1671Q9BY89 1806 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 ZNF106Q9H2Y7 1883 aaKnown RBP3.8□□□□□ -1.8
VPS50-210ENST00000471188 A0A087WUJ7 227 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 TMEM269A0A1B0GVZ9 245 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 TCRBV21S2A2A0A5A6 115 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 FEZF1A0PJY2 475 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 XKRY2A2RUG3 117 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 TMEM210A6NLX4 147 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 XKRYO14609 159 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 GRM6O15303 877 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 PLRG1O43660 514 aaKnown RBP3.8□□□□□ -1.8
VPS50-210ENST00000471188 IL18BPO95998 194 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 PNPP00491 289 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 CSTBP04080 98 aaKnown RBP3.8□□□□□ -1.8
VPS50-210ENST00000471188 THY1P04216 161 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 F13BP05160 661 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 GUSBP08236 651 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 SMIM10L2AP0DMW4 78 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 SMIM10L2BP0DMW5 78 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 HIST1H1CP16403 213 aaKnown RBP3.8□□□□□ -1.8
VPS50-210ENST00000471188 NPPBP16860 134 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 RPL12P30050 165 aaKnown RBP3.8□□□□□ -1.8
VPS50-210ENST00000471188 AKT2P31751 481 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 THBS4P35443 961 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 SRSF4Q08170 494 aaKnown RBP3.8□□□□□ -1.8
VPS50-210ENST00000471188 FUT5Q11128 374 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 CLEC12BQ2HXU8 276 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 FJX1Q86VR8 437 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 OR2AP1Q8NGE2 309 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 OR51A4Q8NGJ6 313 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 OIT3Q8WWZ8 545 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 SHDQ96IW2 340 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 IL17FQ96PD4 163 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 NMNAT3Q96T66 252 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 PARD6GQ9BYG4 376 aaPredicted RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms