RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 CITED1Q99966 193 aa10.18□□□□□ -0.78
COL5A1-207ENST00000469093 HCAR1Q9BXC0 346 aa10.18□□□□□ -0.78
COL5A1-207ENST00000469093 CHIAQ9BZP6 476 aa10.18□□□□□ -0.78
COL5A1-207ENST00000469093 NDEL1Q9GZM8 345 aa10.18□□□□□ -0.78
COL5A1-207ENST00000469093 HDHD2Q9H0R4 259 aa10.18□□□□□ -0.78
COL5A1-207ENST00000469093 RPS6KA6Q9UK32 745 aa10.18□□□□□ -0.78
COL5A1-207ENST00000469093 TMCC3Q9ULS5 477 aa10.18□□□□□ -0.78
COL5A1-207ENST00000469093 B9D1Q9UPM9 204 aa10.18□□□□□ -0.78
COL5A1-207ENST00000469093 POLR1DQ9Y2S0 133 aa10.18□□□□□ -0.78
COL5A1-207ENST00000469093 AP3M1Q9Y2T2 418 aa10.18□□□□□ -0.78
COL5A1-207ENST00000469093 A0A1W2PRQ8 180 aa10.17□□□□□ -0.78
COL5A1-207ENST00000469093 CLPSL1A2RUU4 121 aa10.17□□□□□ -0.78
COL5A1-207ENST00000469093 TNFRSF13BO14836 293 aaPredicted RBP10.17□□□□□ -0.78
COL5A1-207ENST00000469093 ENSAO43768 121 aaKnown RBP10.17□□□□□ -0.78
COL5A1-207ENST00000469093 NDUFA7O95182 113 aa10.17□□□□□ -0.78
COL5A1-207ENST00000469093 SFTPBP07988 381 aa10.17□□□□□ -0.78
COL5A1-207ENST00000469093 MELTFP08582 738 aa10.17□□□□□ -0.78
COL5A1-207ENST00000469093 ACSM4P0C7M7 580 aa10.17□□□□□ -0.78
COL5A1-207ENST00000469093 IRF2P14316 349 aa10.17□□□□□ -0.78
COL5A1-207ENST00000469093 CRABP1P29762 137 aa10.17□□□□□ -0.78
COL5A1-207ENST00000469093 CFHR2P36980 270 aa10.17□□□□□ -0.78
COL5A1-207ENST00000469093 OMPP47874 163 aa10.17□□□□□ -0.78
COL5A1-207ENST00000469093 RAD23AP54725 363 aa10.17□□□□□ -0.78
COL5A1-207ENST00000469093 KRTAP10-3P60369 221 aa10.17□□□□□ -0.78
COL5A1-207ENST00000469093 DBPQ10586 325 aaPredicted RBP10.17□□□□□ -0.78
COL5A1-207ENST00000469093 COX10Q12887 443 aa10.17□□□□□ -0.78
COL5A1-207ENST00000469093 DGCR6Q14129 220 aa10.17□□□□□ -0.78
COL5A1-207ENST00000469093 RUSC1-AS1Q66K80 236 aa10.17□□□□□ -0.78
COL5A1-207ENST00000469093 RHOUQ7L0Q8 258 aa10.17□□□□□ -0.78
COL5A1-207ENST00000469093 OR6V1Q8N148 313 aa10.17□□□□□ -0.78
COL5A1-207ENST00000469093 TMEM86BQ8N661 226 aa10.17□□□□□ -0.78
COL5A1-207ENST00000469093 RCN3Q96D15 328 aa10.17□□□□□ -0.78
COL5A1-207ENST00000469093 FAM71F1Q96KD3 344 aaPredicted RBP10.17□□□□□ -0.78
COL5A1-207ENST00000469093 PCGF1Q9BSM1 259 aa10.17□□□□□ -0.78
COL5A1-207ENST00000469093 SRA1Q9HD15 236 aaKnown RBP10.17□□□□□ -0.78
COL5A1-207ENST00000469093 UFSP2Q9NUQ7 469 aa10.17□□□□□ -0.78
COL5A1-207ENST00000469093 ENPP4Q9Y6X5 453 aa10.17□□□□□ -0.78
COL5A1-207ENST00000469093 IGLV1-36A0A0B4J1U3 117 aa10.16□□□□□ -0.78
COL5A1-207ENST00000469093 A0A0G2JK05 382 aa10.16□□□□□ -0.78
COL5A1-207ENST00000469093 CENPVL3A0A0U1RRI6 287 aa10.16□□□□□ -0.78
COL5A1-207ENST00000469093 ZNF879B4DU55 563 aa10.16□□□□□ -0.78
COL5A1-207ENST00000469093 F5H5K5 113 aa10.16□□□□□ -0.78
COL5A1-207ENST00000469093 P2RY10O00398 339 aa10.16□□□□□ -0.78
COL5A1-207ENST00000469093 GSTA4O15217 222 aa10.16□□□□□ -0.78
COL5A1-207ENST00000469093 FAM20BO75063 409 aa10.16□□□□□ -0.78
COL5A1-207ENST00000469093 PPP1R3DO95685 299 aa10.16□□□□□ -0.78
COL5A1-207ENST00000469093 SERPINA1P01009 418 aa10.16□□□□□ -0.78
COL5A1-207ENST00000469093 LIPFP07098 398 aa10.16□□□□□ -0.78
COL5A1-207ENST00000469093 H1F0P07305 194 aaKnown RBP10.16□□□□□ -0.78
COL5A1-207ENST00000469093 MMP9P14780 707 aa10.16□□□□□ -0.78
COL5A1-207ENST00000469093 CD200P41217 278 aa10.16□□□□□ -0.78
COL5A1-207ENST00000469093 NPY4RP50391 375 aa10.16□□□□□ -0.78
COL5A1-207ENST00000469093 RPS6KA3P51812 740 aa10.16□□□□□ -0.78
COL5A1-207ENST00000469093 SEC23BQ15437 767 aa10.16□□□□□ -0.78
COL5A1-207ENST00000469093 PRAMEF6Q5VXH4 476 aa10.16□□□□□ -0.78
COL5A1-207ENST00000469093 CD276Q5ZPR3 534 aa10.16□□□□□ -0.78
COL5A1-207ENST00000469093 SFRP4Q6FHJ7 346 aaPredicted RBP10.16□□□□□ -0.78
COL5A1-207ENST00000469093 SLC18B1Q6NT16 456 aa10.16□□□□□ -0.78
COL5A1-207ENST00000469093 CGB2Q6NT52 195 aa10.16□□□□□ -0.78
COL5A1-207ENST00000469093 PGM2L1Q6PCE3 622 aa10.16□□□□□ -0.78
COL5A1-207ENST00000469093 ZNF620Q6ZNG0 422 aa10.16□□□□□ -0.78
COL5A1-207ENST00000469093 CFAP77Q6ZQR2 320 aa10.16□□□□□ -0.78
COL5A1-207ENST00000469093 CYP4Z1Q86W10 505 aa10.16□□□□□ -0.78
COL5A1-207ENST00000469093 SLC26A10Q8NG04 563 aa10.16□□□□□ -0.78
COL5A1-207ENST00000469093 OR11L1Q8NGX0 322 aa10.16□□□□□ -0.78
COL5A1-207ENST00000469093 SLCO4A1Q96BD0 722 aa10.16□□□□□ -0.78
COL5A1-207ENST00000469093 RSRC1Q96IZ7 334 aaKnown RBP10.16□□□□□ -0.78
COL5A1-207ENST00000469093 CCT8L2Q96SF2 557 aa10.16□□□□□ -0.78
COL5A1-207ENST00000469093 TBX15Q96SF7 602 aa10.16□□□□□ -0.78
COL5A1-207ENST00000469093 PITX2Q99697 317 aa10.16□□□□□ -0.78
COL5A1-207ENST00000469093 NDUFAF4Q9P032 175 aa10.16□□□□□ -0.78
COL5A1-207ENST00000469093 ERVK-18Q9QC07 812 aa10.16□□□□□ -0.78
COL5A1-207ENST00000469093 CTSZQ9UBR2 303 aa10.16□□□□□ -0.78
COL5A1-207ENST00000469093 TRBV4-1A0A0J9YWV2 114 aa10.15□□□□□ -0.78
COL5A1-207ENST00000469093 UNC119BA6NIH7 251 aa10.15□□□□□ -0.78
COL5A1-207ENST00000469093 NME4O00746 187 aa10.15□□□□□ -0.78
COL5A1-207ENST00000469093 TOX4O94842 621 aa10.15□□□□□ -0.78
COL5A1-207ENST00000469093 LCATP04180 440 aa10.15□□□□□ -0.78
COL5A1-207ENST00000469093 GGT2P36268 569 aa10.15□□□□□ -0.78
COL5A1-207ENST00000469093 ECH1Q13011 328 aa10.15□□□□□ -0.78
COL5A1-207ENST00000469093 DNM1P34Q6PK57 102 aa10.15□□□□□ -0.78
COL5A1-207ENST00000469093 PGAP1Q75T13 922 aa10.15□□□□□ -0.78
COL5A1-207ENST00000469093 ARPINQ7Z6K5 226 aa10.15□□□□□ -0.78
COL5A1-207ENST00000469093 LINC00346Q8IVM7 164 aa10.15□□□□□ -0.78
COL5A1-207ENST00000469093 RP9Q8TA86 221 aaKnown RBP10.15□□□□□ -0.78
COL5A1-207ENST00000469093 TECTBQ96PL2 329 aa10.15□□□□□ -0.78
COL5A1-207ENST00000469093 ERMAPQ96PL5 475 aaPredicted RBP10.15□□□□□ -0.78
COL5A1-207ENST00000469093 NMNAT3Q96T66 252 aa10.15□□□□□ -0.78
COL5A1-207ENST00000469093 ELAC2Q9BQ52 826 aaKnown RBP10.15□□□□□ -0.78
COL5A1-207ENST00000469093 RASSF4Q9H2L5 321 aa10.15□□□□□ -0.78
COL5A1-207ENST00000469093 PNRC2Q9NPJ4 139 aaKnown RBP10.15□□□□□ -0.78
COL5A1-207ENST00000469093 ACOXLQ9NUZ1 547 aa10.15□□□□□ -0.78
COL5A1-207ENST00000469093 ARMCX1Q9P291 453 aa10.15□□□□□ -0.78
COL5A1-207ENST00000469093 RNF7Q9UBF6 113 aa10.15□□□□□ -0.78
COL5A1-207ENST00000469093 CYB5R1Q9UHQ9 305 aa10.15□□□□□ -0.78
COL5A1-207ENST00000469093 AURKCQ9UQB9 309 aa10.15□□□□□ -0.78
COL5A1-207ENST00000469093 FAM32AQ9Y421 112 aaKnown RBP10.15□□□□□ -0.78
COL5A1-207ENST00000469093 POMT1Q9Y6A1 747 aa10.15□□□□□ -0.78
COL5A1-207ENST00000469093 CAPN7Q9Y6W3 813 aa10.15□□□□□ -0.78
COL5A1-207ENST00000469093 CD300LBA8K4G0 201 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms