RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 SLC6A15Q9H2J7 730 aa14.08□□□□□ -0.16
TSPAN4-211ENST00000468468 COLQQ9Y215 455 aaPredicted RBP14.08□□□□□ -0.16
TSPAN4-211ENST00000468468 RHBDD3Q9Y3P4 386 aa14.08□□□□□ -0.16
TSPAN4-211ENST00000468468 TMEM200CA6NKL6 621 aa14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 RAB27BO00194 218 aa14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 BDKRB2P30411 391 aa14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 STARP49675 285 aa14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 SRSF4Q08170 494 aaKnown RBP14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 BEX5Q5H9J7 111 aa14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 JMJD6Q6NYC1 403 aaPredicted RBP14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 SHISA6Q6ZSJ9 500 aa14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 GVQW1Q8N7I0 195 aa14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 TMEM234Q8WY98 164 aa14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 PRRT1Q99946 306 aa14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 ESRP2Q9H6T0 727 aaKnown RBP14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 MED29Q9NX70 200 aa14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 RASL12Q9NYN1 266 aa14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 TNFSF18Q9UNG2 199 aa14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 CABIN1Q9Y6J0 2220 aa14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 A0A1B0GW55 424 aa14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 F8W036 122 aa14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 K7ESF4 209 aa14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 DNASE2O00115 360 aaPredicted RBP14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 DUX4L2P0CJ85 424 aa14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 DUX4L3P0CJ86 424 aa14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 DUX4L4P0CJ87 422 aa14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 DUX4L5P0CJ88 424 aa14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 DUX4L6P0CJ89 424 aa14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 DUX4L7P0CJ90 424 aa14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 FOLR1P15328 257 aa14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 EIF1AXP47813 144 aaKnown RBP14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 ARHGDIBP52566 201 aa14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 ATXN7L3Q14CW9 347 aaPredicted RBP14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 RAB12Q6IQ22 244 aa14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 SLC25A42Q86VD7 318 aa14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 CLRN3Q8NCR9 226 aa14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 FAM46BQ96A09 425 aa14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 VRK1Q99986 396 aaPredicted RBP14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 DUX4Q9UBX2 424 aa14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 PLEKHA6Q9Y2H5 1048 aa14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 SEC16AO15027 2179 aa14.07□□□□□ -0.16
TSPAN4-211ENST00000468468 IGHV3-20A0A0C4DH32 117 aa14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 CPED1A4D0V7 1026 aa14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 OR6C76A6NM76 312 aa14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 OR2F2O95006 317 aa14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 APOC3P02656 99 aa14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 SLC25A4P12235 298 aa14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 ZBTB25P24278 435 aa14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 CXCL12P48061 93 aa14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 DAP3P51398 398 aaKnown RBP14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 AFF3P51826 1226 aaKnown RBP14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 LUMP51884 338 aaPredicted RBP14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 FOXL2P58012 376 aa14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 POU3F1Q03052 451 aaPredicted RBP14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 PPP1R1AQ13522 171 aa14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 OR2F1Q13607 317 aa14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 PCK2Q16822 640 aa14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 PHF19Q5T6S3 580 aa14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 OR52W1Q6IF63 320 aa14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 ZNF813Q6ZN06 617 aa14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 H1FNTQ75WM6 255 aaPredicted RBP14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 LYG2Q86SG7 212 aa14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 PAQR4Q8N4S7 273 aaPredicted RBP14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 OR52N4Q8NGI2 321 aa14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 DNASE2BQ8WZ79 361 aa14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 KCNK17Q96T54 332 aa14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 CDX2Q99626 313 aaPredicted RBP14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 CST11Q9H112 138 aa14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 UNC13CQ8NB66 2214 aa14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 FAM25EA8MYX2 175 aa14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 ADAM10O14672 748 aa14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 NDUFS6O75380 124 aaKnown RBP14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 GIMD1P0DJR0 217 aa14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 CAPZA1P52907 286 aa14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 RP1P56715 2156 aa14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 ZP4Q12836 540 aa14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 SLC22A6Q4U2R8 563 aa14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 DEGS2Q6QHC5 323 aa14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 PPP1R1CQ8WVI7 109 aa14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 NUDCD2Q8WVJ2 157 aa14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 SLC2A8Q9NY64 477 aa14.06□□□□□ -0.16
TSPAN4-211ENST00000468468 ATP1B3P54709 279 aa14.05□□□□□ -0.16
TSPAN4-211ENST00000468468 HSF1Q00613 529 aa14.05□□□□□ -0.16
TSPAN4-211ENST00000468468 FLI1Q01543 452 aaPredicted RBP14.05□□□□□ -0.16
TSPAN4-211ENST00000468468 UNC119Q13432 240 aa14.05□□□□□ -0.16
TSPAN4-211ENST00000468468 ZNF345Q14585 488 aa14.05□□□□□ -0.16
TSPAN4-211ENST00000468468 RNF133Q8WVZ7 376 aa14.05□□□□□ -0.16
TSPAN4-211ENST00000468468 MRGPRFQ96AM1 343 aa14.05□□□□□ -0.16
TSPAN4-211ENST00000468468 ZNF75AQ96N20 296 aa14.05□□□□□ -0.16
TSPAN4-211ENST00000468468 ZNF471Q9BX82 626 aaPredicted RBP14.05□□□□□ -0.16
TSPAN4-211ENST00000468468 PRDM6Q9NQX0 595 aa14.05□□□□□ -0.16
TSPAN4-211ENST00000468468 COL5A1P20908 1838 aaPredicted RBP14.05□□□□□ -0.16
TSPAN4-211ENST00000468468 BCL2L11O43521 198 aa14.05□□□□□ -0.16
TSPAN4-211ENST00000468468 DLSTP36957 453 aa14.05□□□□□ -0.16
TSPAN4-211ENST00000468468 CD96P40200 585 aa14.05□□□□□ -0.16
TSPAN4-211ENST00000468468 MMP16P51512 607 aa14.05□□□□□ -0.16
TSPAN4-211ENST00000468468 TLE3Q04726 772 aa14.05□□□□□ -0.16
TSPAN4-211ENST00000468468 SCRN3Q0VDG4 424 aa14.05□□□□□ -0.16
TSPAN4-211ENST00000468468 MFSD8Q8NHS3 518 aa14.05□□□□□ -0.16
TSPAN4-211ENST00000468468 CLDN23Q96B33 292 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms