RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 LY6HO94772 140 aa17.07■□□□□ 0.32
NPHP4-206ENST00000468253 TMEM33P57088 247 aa17.07■□□□□ 0.32
NPHP4-206ENST00000468253 TMEM255AQ5JRV8 349 aa17.07■□□□□ 0.32
NPHP4-206ENST00000468253 CIARTQ8N365 385 aaPredicted RBP17.07■□□□□ 0.32
NPHP4-206ENST00000468253 THEM6Q8WUY1 208 aa17.07■□□□□ 0.32
NPHP4-206ENST00000468253 RDH12Q96NR8 316 aa17.07■□□□□ 0.32
NPHP4-206ENST00000468253 LAMP5Q9UJQ1 280 aa17.07■□□□□ 0.32
NPHP4-206ENST00000468253 CSPG4Q6UVK1 2322 aa17.06■□□□□ 0.32
NPHP4-206ENST00000468253 VWC2LB2RUY7 222 aa17.06■□□□□ 0.32
NPHP4-206ENST00000468253 HPXP02790 462 aa17.06■□□□□ 0.32
NPHP4-206ENST00000468253 CD55P08174 381 aa17.06■□□□□ 0.32
NPHP4-206ENST00000468253 ANPEPP15144 967 aa17.06■□□□□ 0.32
NPHP4-206ENST00000468253 HTR1FP30939 366 aa17.06■□□□□ 0.32
NPHP4-206ENST00000468253 PRKXP51817 358 aa17.06■□□□□ 0.32
NPHP4-206ENST00000468253 SNRPGP62308 76 aaKnown RBP17.06■□□□□ 0.32
NPHP4-206ENST00000468253 ALKBH6Q3KRA9 238 aa17.06■□□□□ 0.32
NPHP4-206ENST00000468253 KCTD18Q6PI47 426 aaPredicted RBP17.06■□□□□ 0.32
NPHP4-206ENST00000468253 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.06■□□□□ 0.32
NPHP4-206ENST00000468253 ASB17Q8WXJ9 295 aa17.06■□□□□ 0.32
NPHP4-206ENST00000468253 RFKQ969G6 155 aa17.06■□□□□ 0.32
NPHP4-206ENST00000468253 REPIN1Q9BWE0 567 aaKnown RBP17.06■□□□□ 0.32
NPHP4-206ENST00000468253 PTTG3PQ9NZH4 202 aa17.06■□□□□ 0.32
NPHP4-206ENST00000468253 ACOD1A6NK06 481 aa17.05■□□□□ 0.32
NPHP4-206ENST00000468253 RNF223E7ERA6 249 aa17.05■□□□□ 0.32
NPHP4-206ENST00000468253 H2BFMP0C1H6 154 aa17.05■□□□□ 0.32
NPHP4-206ENST00000468253 DCTDP32321 178 aa17.05■□□□□ 0.32
NPHP4-206ENST00000468253 NAA10P41227 235 aaPredicted RBP17.05■□□□□ 0.32
NPHP4-206ENST00000468253 CRYBB2P43320 205 aa17.05■□□□□ 0.32
NPHP4-206ENST00000468253 SLC6A9P48067 706 aa17.05■□□□□ 0.32
NPHP4-206ENST00000468253 LOXL1Q08397 574 aaPredicted RBP17.05■□□□□ 0.32
NPHP4-206ENST00000468253 RIN1Q13671 783 aa17.05■□□□□ 0.32
NPHP4-206ENST00000468253 GK2Q14410 553 aaPredicted RBP17.05■□□□□ 0.32
NPHP4-206ENST00000468253 HLXQ14774 488 aaPredicted RBP17.05■□□□□ 0.32
NPHP4-206ENST00000468253 ZIK1Q3SY52 487 aaPredicted RBP17.05■□□□□ 0.32
NPHP4-206ENST00000468253 BCDIN3DQ7Z5W3 292 aaKnown RBP17.05■□□□□ 0.32
NPHP4-206ENST00000468253 ZNF283Q8N7M2 679 aa17.05■□□□□ 0.32
NPHP4-206ENST00000468253 OR8G5Q8NG78 346 aa17.05■□□□□ 0.32
NPHP4-206ENST00000468253 OR52H1Q8NGJ2 320 aa17.05■□□□□ 0.32
NPHP4-206ENST00000468253 ZNF582Q96NG8 517 aaPredicted RBP17.05■□□□□ 0.32
NPHP4-206ENST00000468253 AMELYQ99218 206 aa17.05■□□□□ 0.32
NPHP4-206ENST00000468253 CNN2Q99439 309 aaKnown RBP17.05■□□□□ 0.32
NPHP4-206ENST00000468253 PIMREGQ9BSJ6 248 aa17.05■□□□□ 0.32
NPHP4-206ENST00000468253 EGLN1Q9GZT9 426 aa17.05■□□□□ 0.32
NPHP4-206ENST00000468253 OPA3Q9H6K4 179 aa17.05■□□□□ 0.32
NPHP4-206ENST00000468253 DECR2Q9NUI1 292 aa17.05■□□□□ 0.32
NPHP4-206ENST00000468253 IMPAD1Q9NX62 359 aa17.05■□□□□ 0.32
NPHP4-206ENST00000468253 A0A1B0GWJ7 208 aa17.04■□□□□ 0.32
NPHP4-206ENST00000468253 IQCF6A8MYZ5 107 aa17.04■□□□□ 0.32
NPHP4-206ENST00000468253 ANKRD65E5RJM6 399 aa17.04■□□□□ 0.32
NPHP4-206ENST00000468253 SLC16A6O15403 523 aa17.04■□□□□ 0.32
NPHP4-206ENST00000468253 ZNF254O75437 659 aa17.04■□□□□ 0.32
NPHP4-206ENST00000468253 IGHV1-46P01743 117 aa17.04■□□□□ 0.32
NPHP4-206ENST00000468253 ACHEP22303 614 aa17.04■□□□□ 0.32
NPHP4-206ENST00000468253 COL8A2P25067 703 aa17.04■□□□□ 0.32
NPHP4-206ENST00000468253 HSD11B1P28845 292 aa17.04■□□□□ 0.32
NPHP4-206ENST00000468253 NR4A2P43354 598 aa17.04■□□□□ 0.32
NPHP4-206ENST00000468253 MAGEB1P43366 347 aa17.04■□□□□ 0.32
NPHP4-206ENST00000468253 ROM1Q03395 351 aa17.04■□□□□ 0.32
NPHP4-206ENST00000468253 POU4F2Q12837 409 aa17.04■□□□□ 0.32
NPHP4-206ENST00000468253 OCLNQ16625 522 aa17.04■□□□□ 0.32
NPHP4-206ENST00000468253 MEDAGQ5VYS4 303 aa17.04■□□□□ 0.32
NPHP4-206ENST00000468253 OR2T2Q6IF00 324 aa17.04■□□□□ 0.32
NPHP4-206ENST00000468253 PRSS45Q7RTY3 260 aa17.04■□□□□ 0.32
NPHP4-206ENST00000468253 PACRGLQ8N7B6 248 aa17.04■□□□□ 0.32
NPHP4-206ENST00000468253 OR13G1Q8NGZ3 307 aa17.04■□□□□ 0.32
NPHP4-206ENST00000468253 ITFG2Q969R8 447 aa17.04■□□□□ 0.32
NPHP4-206ENST00000468253 SPSB4Q96A44 273 aa17.04■□□□□ 0.32
NPHP4-206ENST00000468253 MBOAT4Q96T53 435 aa17.04■□□□□ 0.32
NPHP4-206ENST00000468253 CHODLQ9H9P2 273 aa17.04■□□□□ 0.32
NPHP4-206ENST00000468253 A0A096LNT2 108 aa17.03■□□□□ 0.32
NPHP4-206ENST00000468253 ZSCAN5BA6NJL1 495 aa17.03■□□□□ 0.32
NPHP4-206ENST00000468253 M0R129 80 aa17.03■□□□□ 0.32
NPHP4-206ENST00000468253 PHYHO14832 338 aa17.03■□□□□ 0.32
NPHP4-206ENST00000468253 XRCC2O43543 280 aa17.03■□□□□ 0.32
NPHP4-206ENST00000468253 SPRY3O43610 288 aa17.03■□□□□ 0.32
NPHP4-206ENST00000468253 MPZL2O60487 215 aa17.03■□□□□ 0.32
NPHP4-206ENST00000468253 SBK2P0C263 348 aa17.03■□□□□ 0.32
NPHP4-206ENST00000468253 TNFSF4P23510 183 aa17.03■□□□□ 0.32
NPHP4-206ENST00000468253 HCCSP53701 268 aa17.03■□□□□ 0.32
NPHP4-206ENST00000468253 CCL8P80075 99 aa17.03■□□□□ 0.32
NPHP4-206ENST00000468253 RCN1Q15293 331 aa17.03■□□□□ 0.32
NPHP4-206ENST00000468253 SNAI3Q3KNW1 292 aa17.03■□□□□ 0.32
NPHP4-206ENST00000468253 PGAP1Q75T13 922 aa17.03■□□□□ 0.32
NPHP4-206ENST00000468253 SPATC1Q76KD6 591 aa17.03■□□□□ 0.32
NPHP4-206ENST00000468253 FAM81AQ8TBF8 368 aa17.03■□□□□ 0.32
NPHP4-206ENST00000468253 UBE2FQ969M7 185 aa17.03■□□□□ 0.32
NPHP4-206ENST00000468253 SLC30A2Q9BRI3 323 aa17.03■□□□□ 0.32
NPHP4-206ENST00000468253 DCLRE1BQ9H816 532 aa17.03■□□□□ 0.32
NPHP4-206ENST00000468253 ADGRL4Q9HBW9 690 aa17.03■□□□□ 0.32
NPHP4-206ENST00000468253 MSL2Q9HCI7 577 aa17.03■□□□□ 0.32
NPHP4-206ENST00000468253 FAM118AQ9NWS6 357 aa17.03■□□□□ 0.32
NPHP4-206ENST00000468253 CLN6Q9NWW5 311 aa17.03■□□□□ 0.32
NPHP4-206ENST00000468253 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.03■□□□□ 0.32
NPHP4-206ENST00000468253 GMPPBQ9Y5P6 360 aa17.03■□□□□ 0.32
NPHP4-206ENST00000468253 LOC100130705A0A1B0GUX0 176 aa17.02■□□□□ 0.32
NPHP4-206ENST00000468253 SNTNA6NMZ2 147 aa17.02■□□□□ 0.32
NPHP4-206ENST00000468253 NCR1O76036 304 aa17.02■□□□□ 0.32
NPHP4-206ENST00000468253 USF1P22415 310 aaPredicted RBP17.02■□□□□ 0.32
NPHP4-206ENST00000468253 CFL1P23528 166 aaKnown RBP17.02■□□□□ 0.32
NPHP4-206ENST00000468253 DDOSTP39656 456 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms