RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.37□□□□□ -0.43
ATPAF2-204ENST00000467560 TRAP1Q12931 704 aaKnown RBP12.37□□□□□ -0.43
ATPAF2-204ENST00000467560 PPP1R8Q12972 351 aaKnown RBP12.37□□□□□ -0.43
ATPAF2-204ENST00000467560 TSPAN31Q12999 210 aa12.37□□□□□ -0.43
ATPAF2-204ENST00000467560 MAB21L1Q13394 359 aa12.37□□□□□ -0.43
ATPAF2-204ENST00000467560 ZNF770Q6IQ21 691 aaPredicted RBP12.37□□□□□ -0.43
ATPAF2-204ENST00000467560 PGM2L1Q6PCE3 622 aa12.37□□□□□ -0.43
ATPAF2-204ENST00000467560 CYP2R1Q6VVX0 501 aa12.37□□□□□ -0.43
ATPAF2-204ENST00000467560 ZDHHC21Q8IVQ6 265 aa12.37□□□□□ -0.43
ATPAF2-204ENST00000467560 DEFB107AQ8IZN7 70 aa12.37□□□□□ -0.43
ATPAF2-204ENST00000467560 BPIFB2Q8N4F0 458 aa12.37□□□□□ -0.43
ATPAF2-204ENST00000467560 TEX29Q8N6K0 151 aa12.37□□□□□ -0.43
ATPAF2-204ENST00000467560 C19orf18Q8NEA5 215 aa12.37□□□□□ -0.43
ATPAF2-204ENST00000467560 OR5L1Q8NGL2 311 aa12.37□□□□□ -0.43
ATPAF2-204ENST00000467560 OR4C15Q8NGM1 316 aa12.37□□□□□ -0.43
ATPAF2-204ENST00000467560 OR13G1Q8NGZ3 307 aa12.37□□□□□ -0.43
ATPAF2-204ENST00000467560 GNPDA2Q8TDQ7 276 aa12.37□□□□□ -0.43
ATPAF2-204ENST00000467560 DACT3Q96B18 629 aaPredicted RBP12.37□□□□□ -0.43
ATPAF2-204ENST00000467560 C1orf147Q96MC9 270 aaPredicted RBP12.37□□□□□ -0.43
ATPAF2-204ENST00000467560 ZNF48Q96MX3 618 aaPredicted RBP12.37□□□□□ -0.43
ATPAF2-204ENST00000467560 PITX2Q99697 317 aa12.37□□□□□ -0.43
ATPAF2-204ENST00000467560 SUCNR1Q9BXA5 334 aa12.37□□□□□ -0.43
ATPAF2-204ENST00000467560 VNN3Q9NY84 501 aa12.37□□□□□ -0.43
ATPAF2-204ENST00000467560 PPIAL4AQ9Y536 164 aa12.37□□□□□ -0.43
ATPAF2-204ENST00000467560 LYVE1Q9Y5Y7 322 aa12.37□□□□□ -0.43
ATPAF2-204ENST00000467560 TVP23AA6NH52 213 aa12.36□□□□□ -0.43
ATPAF2-204ENST00000467560 TRIM77I1YAP6 450 aa12.36□□□□□ -0.43
ATPAF2-204ENST00000467560 BHLHE40O14503 412 aa12.36□□□□□ -0.43
ATPAF2-204ENST00000467560 HLA-DQA2P01906 255 aa12.36□□□□□ -0.43
ATPAF2-204ENST00000467560 NOS3P29474 1203 aa12.36□□□□□ -0.43
ATPAF2-204ENST00000467560 RASSF2P50749 326 aa12.36□□□□□ -0.43
ATPAF2-204ENST00000467560 UBA52P62987 128 aaKnown RBP12.36□□□□□ -0.43
ATPAF2-204ENST00000467560 SNAI3Q3KNW1 292 aa12.36□□□□□ -0.43
ATPAF2-204ENST00000467560 SIGLECL1Q8N7X8 197 aa12.36□□□□□ -0.43
ATPAF2-204ENST00000467560 OR51L1Q8NGJ5 315 aa12.36□□□□□ -0.43
ATPAF2-204ENST00000467560 GCDHQ92947 438 aaPredicted RBP12.36□□□□□ -0.43
ATPAF2-204ENST00000467560 MCUR1Q96AQ8 359 aa12.36□□□□□ -0.43
ATPAF2-204ENST00000467560 SLCO4A1Q96BD0 722 aa12.36□□□□□ -0.43
ATPAF2-204ENST00000467560 DUX5Q96PT3 197 aa12.36□□□□□ -0.43
ATPAF2-204ENST00000467560 ATF6BQ99941 703 aa12.36□□□□□ -0.43
ATPAF2-204ENST00000467560 TMEM246Q9BRR3 403 aa12.36□□□□□ -0.43
ATPAF2-204ENST00000467560 TMCC3Q9ULS5 477 aa12.36□□□□□ -0.43
ATPAF2-204ENST00000467560 AUP1Q9Y679 476 aa12.36□□□□□ -0.43
ATPAF2-204ENST00000467560 IGHV3OR16-10A0A075B7F0 116 aa12.35□□□□□ -0.43
ATPAF2-204ENST00000467560 TCRBV5S2A0A599 114 aa12.35□□□□□ -0.43
ATPAF2-204ENST00000467560 B2RBV5 119 aa12.35□□□□□ -0.43
ATPAF2-204ENST00000467560 IDH3BO43837 385 aa12.35□□□□□ -0.43
ATPAF2-204ENST00000467560 GASTP01350 101 aa12.35□□□□□ -0.43
ATPAF2-204ENST00000467560 LCATP04180 440 aa12.35□□□□□ -0.43
ATPAF2-204ENST00000467560 T-ENOLP0DO92 83 aa12.35□□□□□ -0.43
ATPAF2-204ENST00000467560 IGHV4-38-2P0DP08 117 aa12.35□□□□□ -0.43
ATPAF2-204ENST00000467560 SRP9P49458 86 aaKnown RBP12.35□□□□□ -0.43
ATPAF2-204ENST00000467560 HMGA2P52926 109 aa12.35□□□□□ -0.43
ATPAF2-204ENST00000467560 PAX8Q06710 450 aa12.35□□□□□ -0.43
ATPAF2-204ENST00000467560 MPPED2Q15777 294 aa12.35□□□□□ -0.43
ATPAF2-204ENST00000467560 PRAMEF6Q5VXH4 476 aa12.35□□□□□ -0.43
ATPAF2-204ENST00000467560 SLC27A4Q6P1M0 643 aa12.35□□□□□ -0.43
ATPAF2-204ENST00000467560 KLBQ86Z14 1044 aa12.35□□□□□ -0.43
ATPAF2-204ENST00000467560 TAF15Q92804 592 aaKnown RBP eCLIP12.35□□□□□ -0.43
ATPAF2-204ENST00000467560 POP5Q969H6 163 aaKnown RBP12.35□□□□□ -0.43
ATPAF2-204ENST00000467560 RBM4Q9BWF3 364 aaKnown RBP12.35□□□□□ -0.43
ATPAF2-204ENST00000467560 TMEM100Q9NV29 134 aa12.35□□□□□ -0.43
ATPAF2-204ENST00000467560 CDH10Q9Y6N8 788 aa12.35□□□□□ -0.43
ATPAF2-204ENST00000467560 IFNGR2P38484 337 aa12.34□□□□□ -0.43
ATPAF2-204ENST00000467560 RAD23AP54725 363 aa12.34□□□□□ -0.43
ATPAF2-204ENST00000467560 MXRA7P84157 204 aa12.34□□□□□ -0.43
ATPAF2-204ENST00000467560 ZNF92Q03936 586 aa12.34□□□□□ -0.43
ATPAF2-204ENST00000467560 ZNF404Q494X3 552 aa12.34□□□□□ -0.43
ATPAF2-204ENST00000467560 SLC36A3Q495N2 470 aa12.34□□□□□ -0.43
ATPAF2-204ENST00000467560 ESCO2Q56NI9 601 aa12.34□□□□□ -0.43
ATPAF2-204ENST00000467560 ARMCX4Q5H9R4 360 aa12.34□□□□□ -0.43
ATPAF2-204ENST00000467560 LYPD2Q6UXB3 125 aa12.34□□□□□ -0.43
ATPAF2-204ENST00000467560 MUC20Q8N307 709 aaPredicted RBP12.34□□□□□ -0.43
ATPAF2-204ENST00000467560 SLC37A3Q8NCC5 494 aa12.34□□□□□ -0.43
ATPAF2-204ENST00000467560 OR9Q1Q8NGQ5 310 aa12.34□□□□□ -0.43
ATPAF2-204ENST00000467560 OR2AJ1Q8NGZ0 328 aa12.34□□□□□ -0.43
ATPAF2-204ENST00000467560 OR4Q3Q8NH05 313 aa12.34□□□□□ -0.43
ATPAF2-204ENST00000467560 OR2AE1Q8NHA4 323 aa12.34□□□□□ -0.43
ATPAF2-204ENST00000467560 JMJD8Q96S16 334 aa12.34□□□□□ -0.43
ATPAF2-204ENST00000467560 CDADC1Q9BWV3 514 aa12.34□□□□□ -0.43
ATPAF2-204ENST00000467560 NUP50Q9UKX7 468 aa12.34□□□□□ -0.43
ATPAF2-204ENST00000467560 PRPF19Q9UMS4 504 aaKnown RBP12.34□□□□□ -0.43
ATPAF2-204ENST00000467560 M0R135 149 aa12.33□□□□□ -0.44
ATPAF2-204ENST00000467560 TNFRSF11BO00300 401 aa12.33□□□□□ -0.44
ATPAF2-204ENST00000467560 GYPBP06028 91 aa12.33□□□□□ -0.44
ATPAF2-204ENST00000467560 CLUP10909 449 aa12.33□□□□□ -0.44
ATPAF2-204ENST00000467560 RPS2P15880 293 aaKnown RBP12.33□□□□□ -0.44
ATPAF2-204ENST00000467560 EGR1P18146 543 aa12.33□□□□□ -0.44
ATPAF2-204ENST00000467560 CA6P23280 308 aa12.33□□□□□ -0.44
ATPAF2-204ENST00000467560 FPR2P25090 351 aa12.33□□□□□ -0.44
ATPAF2-204ENST00000467560 MAGEA2P43356 314 aa12.33□□□□□ -0.44
ATPAF2-204ENST00000467560 GATA4P43694 442 aa12.33□□□□□ -0.44
ATPAF2-204ENST00000467560 BNIP1Q12981 228 aa12.33□□□□□ -0.44
ATPAF2-204ENST00000467560 ECH1Q13011 328 aa12.33□□□□□ -0.44
ATPAF2-204ENST00000467560 ZNF181Q2M3W8 571 aa12.33□□□□□ -0.44
ATPAF2-204ENST00000467560 DNAL1Q4LDG9 190 aa12.33□□□□□ -0.44
ATPAF2-204ENST00000467560 AWAT1Q58HT5 328 aa12.33□□□□□ -0.44
ATPAF2-204ENST00000467560 DOK3Q7L591 496 aa12.33□□□□□ -0.44
ATPAF2-204ENST00000467560 ZNF511Q8NB15 262 aa12.33□□□□□ -0.44
ATPAF2-204ENST00000467560 PROKR2Q8NFJ6 384 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms