RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 OR5K2Q8NHB8 316 aa2.17□□□□□ -2.06
XRN1-206ENST00000467077 LINC01560Q8TB33 94 aa2.17□□□□□ -2.06
XRN1-206ENST00000467077 DTX3LQ8TDB6 740 aa2.17□□□□□ -2.06
XRN1-206ENST00000467077 TRUB1Q8WWH5 349 aaKnown RBP2.17□□□□□ -2.06
XRN1-206ENST00000467077 ELMO1Q92556 727 aa2.17□□□□□ -2.06
XRN1-206ENST00000467077 RNASE6Q93091 150 aaKnown RBP2.17□□□□□ -2.06
XRN1-206ENST00000467077 FAM104AQ969W3 186 aa2.17□□□□□ -2.06
XRN1-206ENST00000467077 AKR1E2Q96JD6 320 aa2.17□□□□□ -2.06
XRN1-206ENST00000467077 C4orf36Q96KX1 117 aa2.17□□□□□ -2.06
XRN1-206ENST00000467077 CYTH2Q99418 400 aa2.17□□□□□ -2.06
XRN1-206ENST00000467077 COPS8Q99627 209 aa2.17□□□□□ -2.06
XRN1-206ENST00000467077 CCL19Q99731 98 aa2.17□□□□□ -2.06
XRN1-206ENST00000467077 GPA33Q99795 319 aa2.17□□□□□ -2.06
XRN1-206ENST00000467077 SLC30A2Q9BRI3 323 aa2.17□□□□□ -2.06
XRN1-206ENST00000467077 ZNF416Q9BWM5 594 aa2.17□□□□□ -2.06
XRN1-206ENST00000467077 Q9H3A6 140 aa2.17□□□□□ -2.06
XRN1-206ENST00000467077 TRABDQ9H4I3 376 aa2.17□□□□□ -2.06
XRN1-206ENST00000467077 EXO5Q9H790 373 aa2.17□□□□□ -2.06
XRN1-206ENST00000467077 MRPL47Q9HD33 250 aaKnown RBP2.17□□□□□ -2.06
XRN1-206ENST00000467077 SLC35D1Q9NTN3 355 aa2.17□□□□□ -2.06
XRN1-206ENST00000467077 C14orf105Q9NVL8 296 aa2.17□□□□□ -2.06
XRN1-206ENST00000467077 MTRF1LQ9UGC7 380 aaKnown RBP2.17□□□□□ -2.06
XRN1-206ENST00000467077 ANAPC7Q9UJX3 599 aa2.17□□□□□ -2.06
XRN1-206ENST00000467077 KLF13Q9Y2Y9 288 aaPredicted RBP2.17□□□□□ -2.06
XRN1-206ENST00000467077 FAM215AQ9Y5M1 114 aa2.17□□□□□ -2.06
XRN1-206ENST00000467077 ARL5AQ9Y689 179 aa2.17□□□□□ -2.06
XRN1-206ENST00000467077 YLPM1P49750 1951 aaKnown RBP2.17□□□□□ -2.06
XRN1-206ENST00000467077 MPDZO75970 2070 aa2.17□□□□□ -2.06
XRN1-206ENST00000467077 FN1P02751 2386 aaKnown RBP2.17□□□□□ -2.06
XRN1-206ENST00000467077 DYSFO75923 2080 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 CNTRLQ7Z7A1 2325 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 PPIAL4CA0A0B4J2A2 164 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 LOC285095A0A1B0GVY8 99 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 EEF1E1-BLOC1S5C9J1V9 151 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 H0YGG7 62 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 CCL22O00626 93 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 OR7A17O14581 309 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 BCKDKO14874 412 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 LIN7AO14910 233 aaPredicted RBP2.16□□□□□ -2.06
XRN1-206ENST00000467077 EEF1E1O43324 174 aaKnown RBP2.16□□□□□ -2.06
XRN1-206ENST00000467077 PEX11AO75192 247 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 ZNF254O75437 659 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 GUCA1CO95843 209 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 AGTP01019 485 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 FTH1P02794 183 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 STATHP02808 62 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 RPN2P04844 631 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 IGF1P05019 195 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 PPIAL4GP0DN37 164 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 ATP5A1P25705 553 aaKnown RBP2.16□□□□□ -2.06
XRN1-206ENST00000467077 PSMB5P28074 263 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 CMPK1P30085 196 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 HPDP32754 393 aaPredicted RBP2.16□□□□□ -2.06
XRN1-206ENST00000467077 DYNLT1P63172 113 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 BDH1Q02338 343 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 SLC25A11Q02978 314 aaKnown RBP2.16□□□□□ -2.06
XRN1-206ENST00000467077 KLHL30Q0D2K2 578 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 ST3GAL3Q11203 375 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 PDK2Q15119 407 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 TAF1AQ15573 450 aaPredicted RBP2.16□□□□□ -2.06
XRN1-206ENST00000467077 NSDHLQ15738 373 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 CHRFAM7AQ494W8 412 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 SFT2D3Q587I9 215 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 DNAJC21Q5F1R6 531 aaKnown RBP2.16□□□□□ -2.06
XRN1-206ENST00000467077 CCDC183Q5T5S1 534 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 C1orf185Q5T7R7 199 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 RIPPLY2Q5TAB7 128 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 NCR3LG1Q68D85 454 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 PVRIGQ6DKI7 326 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 TTC23LQ6PF05 361 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 RGS9BPQ6ZS82 235 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 DPY19L4Q7Z388 723 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 SNX20Q7Z614 316 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 RPS19BP1Q86WX3 136 aaKnown RBP2.16□□□□□ -2.06
XRN1-206ENST00000467077 MKXQ8IYA7 352 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 LRRC75A-AS1Q8N1F1 130 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 CYP4Z2PQ8N1L4 340 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 LINC01561Q8N1V8 128 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 KIF2BQ8N4N8 673 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 TMEM156Q8N614 296 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 PQLC3Q8N755 202 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 ZFP62Q8NB50 900 aaPredicted RBP2.16□□□□□ -2.06
XRN1-206ENST00000467077 IPMKQ8NFU5 416 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 OR2L3Q8NG85 312 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 OR4K2Q8NGD2 314 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 OR13C4Q8NGS5 318 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 OR2L8Q8NGY9 312 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 SKA2Q8WVK7 121 aaPredicted RBP2.16□□□□□ -2.06
XRN1-206ENST00000467077 IL1F10Q8WWZ1 152 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 RERGQ96A58 199 aaPredicted RBP2.16□□□□□ -2.06
XRN1-206ENST00000467077 DTNBP1Q96EV8 351 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 SDSLQ96GA7 329 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 VPS39Q96JC1 886 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 CAPZA3Q96KX2 299 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 NOL4LQ96MY1 436 aaPredicted RBP2.16□□□□□ -2.06
XRN1-206ENST00000467077 NPAS2Q99743 824 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 DRC3Q9H069 523 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 LRTM1Q9HBL6 345 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 PALMDQ9NP74 551 aa2.16□□□□□ -2.06
XRN1-206ENST00000467077 MRPL39Q9NYK5 338 aaKnown RBP2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms