RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 TRMT12Q53H54 448 aaKnown RBP7.91□□□□□ -1.14
HPS4-209ENST00000466781 CADM4Q8NFZ8 388 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 RDH5Q92781 318 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 MRGPRX4Q96LA9 322 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 SLC25A21Q9BQT8 299 aaPredicted RBP7.91□□□□□ -1.14
HPS4-209ENST00000466781 S1PR5Q9H228 398 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 CACFD1Q9UGQ2 172 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 GABRG2P18507 467 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 GCAP28676 217 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 CCSMST1Q4G0I0 132 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 DHRS4L2Q6PKH6 230 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 OR13C8Q8NGS7 320 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 OR2V1Q8NHB1 315 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 GAR1Q9NY12 217 aaKnown RBP7.91□□□□□ -1.14
HPS4-209ENST00000466781 ASH2LQ9UBL3 628 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 C19orf53Q9UNZ5 99 aaPredicted RBP7.91□□□□□ -1.14
HPS4-209ENST00000466781 STRAPQ9Y3F4 350 aaKnown RBP7.91□□□□□ -1.14
HPS4-209ENST00000466781 TNFRSF1AP19438 455 aa7.9□□□□□ -1.14
HPS4-209ENST00000466781 SLC19A1P41440 591 aa7.9□□□□□ -1.14
HPS4-209ENST00000466781 ZNF766Q5HY98 468 aa7.9□□□□□ -1.14
HPS4-209ENST00000466781 RETREG3Q86VR2 466 aa7.9□□□□□ -1.14
HPS4-209ENST00000466781 IL21Q9HBE4 155 aa7.9□□□□□ -1.14
HPS4-209ENST00000466781 ACOXLQ9NUZ1 547 aa7.9□□□□□ -1.14
HPS4-209ENST00000466781 TCAPO15273 167 aa7.9□□□□□ -1.14
HPS4-209ENST00000466781 PPIHO43447 177 aaKnown RBP7.9□□□□□ -1.14
HPS4-209ENST00000466781 IAPPP10997 89 aa7.9□□□□□ -1.14
HPS4-209ENST00000466781 S100A4P26447 101 aaKnown RBP7.9□□□□□ -1.14
HPS4-209ENST00000466781 ZNF90Q03938 601 aa7.9□□□□□ -1.14
HPS4-209ENST00000466781 VMA21Q3ZAQ7 101 aa7.9□□□□□ -1.14
HPS4-209ENST00000466781 CORO6Q6QEF8 472 aa7.9□□□□□ -1.14
HPS4-209ENST00000466781 SLC24A4Q8NFF2 622 aa7.9□□□□□ -1.14
HPS4-209ENST00000466781 OR2M7Q8NG81 312 aa7.9□□□□□ -1.14
HPS4-209ENST00000466781 OR52H1Q8NGJ2 320 aa7.9□□□□□ -1.14
HPS4-209ENST00000466781 OR1J1Q8NGS3 322 aa7.9□□□□□ -1.14
HPS4-209ENST00000466781 OR4F5Q8NH21 305 aa7.9□□□□□ -1.14
HPS4-209ENST00000466781 TSLPQ969D9 159 aa7.9□□□□□ -1.14
HPS4-209ENST00000466781 TVP23CQ96ET8 276 aa7.9□□□□□ -1.14
HPS4-209ENST00000466781 CIB3Q96Q77 187 aaPredicted RBP7.9□□□□□ -1.14
HPS4-209ENST00000466781 OR4F4Q96R69 305 aa7.9□□□□□ -1.14
HPS4-209ENST00000466781 PRR14Q9BWN1 585 aa7.9□□□□□ -1.14
HPS4-209ENST00000466781 NPAP1Q9NZP6 1156 aa7.9□□□□□ -1.14
HPS4-209ENST00000466781 FLVCR1Q9Y5Y0 555 aa7.9□□□□□ -1.14
HPS4-209ENST00000466781 SERTM1A2A2V5 107 aa7.9□□□□□ -1.14
HPS4-209ENST00000466781 MAGEB4O15481 346 aaPredicted RBP7.9□□□□□ -1.14
HPS4-209ENST00000466781 WDR1O75083 606 aa7.9□□□□□ -1.14
HPS4-209ENST00000466781 ATP1B1P05026 303 aa7.9□□□□□ -1.14
HPS4-209ENST00000466781 ALOX5APP20292 161 aa7.9□□□□□ -1.14
HPS4-209ENST00000466781 DOC2BQ14184 412 aa7.9□□□□□ -1.14
HPS4-209ENST00000466781 FZD2Q14332 565 aa7.9□□□□□ -1.14
HPS4-209ENST00000466781 SHBQ15464 509 aa7.9□□□□□ -1.14
HPS4-209ENST00000466781 OR1C1Q15619 314 aa7.9□□□□□ -1.14
HPS4-209ENST00000466781 TMEM65Q6PI78 240 aa7.9□□□□□ -1.14
HPS4-209ENST00000466781 DRAM2Q6UX65 266 aa7.9□□□□□ -1.14
HPS4-209ENST00000466781 BCDIN3DQ7Z5W3 292 aaKnown RBP7.9□□□□□ -1.14
HPS4-209ENST00000466781 ESRP2Q9H6T0 727 aaKnown RBP7.9□□□□□ -1.14
HPS4-209ENST00000466781 TRGV5A0A0B4J1U4 118 aa7.9□□□□□ -1.15
HPS4-209ENST00000466781 A0A1W2PPC1 479 aa7.9□□□□□ -1.15
HPS4-209ENST00000466781 FRG2CA6NGY1 282 aa7.9□□□□□ -1.15
HPS4-209ENST00000466781 DNASE2O00115 360 aaPredicted RBP7.9□□□□□ -1.15
HPS4-209ENST00000466781 CTDSP2O14595 271 aa7.9□□□□□ -1.15
HPS4-209ENST00000466781 ST8SIA3O43173 380 aa7.9□□□□□ -1.15
HPS4-209ENST00000466781 TCRBP04435 133 aa7.9□□□□□ -1.15
HPS4-209ENST00000466781 AKR1C3P42330 323 aa7.9□□□□□ -1.15
HPS4-209ENST00000466781 HAAOP46952 286 aa7.9□□□□□ -1.15
HPS4-209ENST00000466781 CCR6P51684 374 aa7.9□□□□□ -1.15
HPS4-209ENST00000466781 DSCR4P56555 118 aaPredicted RBP7.9□□□□□ -1.15
HPS4-209ENST00000466781 SNRPGP62308 76 aaKnown RBP7.9□□□□□ -1.15
HPS4-209ENST00000466781 DHODHQ02127 395 aa7.9□□□□□ -1.15
HPS4-209ENST00000466781 DPTQ07507 201 aa7.9□□□□□ -1.15
HPS4-209ENST00000466781 EXOSC2Q13868 293 aaKnown RBP7.9□□□□□ -1.15
HPS4-209ENST00000466781 KIAA1958Q8N8K9 716 aa7.9□□□□□ -1.15
HPS4-209ENST00000466781 OR4Q3Q8NH05 313 aa7.9□□□□□ -1.15
HPS4-209ENST00000466781 MBP02144 154 aa7.9□□□□□ -1.15
HPS4-209ENST00000466781 PPICP45877 212 aa7.9□□□□□ -1.15
HPS4-209ENST00000466781 OLIG3Q7RTU3 272 aa7.9□□□□□ -1.15
HPS4-209ENST00000466781 FBXL6Q8N531 539 aa7.9□□□□□ -1.15
HPS4-209ENST00000466781 OLIG1Q8TAK6 271 aa7.9□□□□□ -1.15
HPS4-209ENST00000466781 NIPSNAP1Q9BPW8 284 aa7.9□□□□□ -1.15
HPS4-209ENST00000466781 CHST6Q9GZX3 395 aa7.9□□□□□ -1.15
HPS4-209ENST00000466781 UBQLN3Q9H347 655 aa7.9□□□□□ -1.15
HPS4-209ENST00000466781 TNFRSF19Q9NS68 423 aa7.9□□□□□ -1.15
HPS4-209ENST00000466781 ARL2-SNX15V9GYD0 113 aa7.9□□□□□ -1.15
HPS4-209ENST00000466781 ADAM10O14672 748 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 H2AFB1P0C5Y9 115 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 TEAD1P28347 426 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 GPR3P46089 330 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 DEFA6Q01524 100 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 FAM162BQ5T6X4 162 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 SYT6Q5T7P8 510 aaPredicted RBP7.89□□□□□ -1.15
HPS4-209ENST00000466781 PATE1Q8WXA2 126 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 MVB12AQ96EY5 273 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 PELI1Q96FA3 418 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 POM121L2Q96KW2 1035 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 FAM103A1Q9BTL3 118 aaKnown RBP7.89□□□□□ -1.15
HPS4-209ENST00000466781 CHRDL1Q9BU40 450 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 C1QTNF3Q9BXJ4 246 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 GON7Q9BXV9 100 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 TRDV1A0A1B0GX56 115 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 GFYI3L273 518 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 CBR3O75828 277 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms