RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 TAF13Q15543 124 aa9.62□□□□□ -0.87
VCP-204ENST00000466100 ZNF829Q3KNS6 432 aaPredicted RBP9.62□□□□□ -0.87
VCP-204ENST00000466100 BEX5Q5H9J7 111 aa9.62□□□□□ -0.87
VCP-204ENST00000466100 UBE2UQ5VVX9 321 aa9.62□□□□□ -0.87
VCP-204ENST00000466100 FAM220AQ7Z4H9 259 aa9.62□□□□□ -0.87
VCP-204ENST00000466100 CATSPERDQ86XM0 798 aa9.62□□□□□ -0.87
VCP-204ENST00000466100 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.62□□□□□ -0.87
VCP-204ENST00000466100 PRSS35Q8N3Z0 413 aa9.62□□□□□ -0.87
VCP-204ENST00000466100 SVOPQ8N4V2 548 aa9.62□□□□□ -0.87
VCP-204ENST00000466100 ZNF283Q8N7M2 679 aa9.62□□□□□ -0.87
VCP-204ENST00000466100 GATAD2BQ8WXI9 593 aa9.62□□□□□ -0.87
VCP-204ENST00000466100 PLPPR2Q96GM1 343 aa9.62□□□□□ -0.87
VCP-204ENST00000466100 C4orf45Q96LM5 186 aa9.62□□□□□ -0.87
VCP-204ENST00000466100 PSMG3-AS1Q96PY0 264 aa9.62□□□□□ -0.87
VCP-204ENST00000466100 HS3ST6Q96QI5 342 aa9.62□□□□□ -0.87
VCP-204ENST00000466100 MYCBPQ99417 103 aaPredicted RBP9.62□□□□□ -0.87
VCP-204ENST00000466100 CDH20Q9HBT6 801 aa9.62□□□□□ -0.87
VCP-204ENST00000466100 TBCCD1Q9NVR7 557 aa9.62□□□□□ -0.87
VCP-204ENST00000466100 CHCHD3Q9NX63 227 aaKnown RBP9.62□□□□□ -0.87
VCP-204ENST00000466100 ZNF319Q9P2F9 582 aa9.62□□□□□ -0.87
VCP-204ENST00000466100 ST6GALNAC2Q9UJ37 374 aa9.62□□□□□ -0.87
VCP-204ENST00000466100 SIRT4Q9Y6E7 314 aaPredicted RBP9.62□□□□□ -0.87
VCP-204ENST00000466100 AKAP6Q13023 2319 aa9.62□□□□□ -0.87
VCP-204ENST00000466100 A0A087WXM4 84 aa9.61□□□□□ -0.87
VCP-204ENST00000466100 TMEM269A0A1B0GVZ9 245 aa9.61□□□□□ -0.87
VCP-204ENST00000466100 ACOD1A6NK06 481 aa9.61□□□□□ -0.87
VCP-204ENST00000466100 SHISA9B4DS77 424 aa9.61□□□□□ -0.87
VCP-204ENST00000466100 J3QW42 95 aa9.61□□□□□ -0.87
VCP-204ENST00000466100 ABCD4O14678 606 aa9.61□□□□□ -0.87
VCP-204ENST00000466100 RPP14O95059 124 aaKnown RBP9.61□□□□□ -0.87
VCP-204ENST00000466100 NGFP01138 241 aa9.61□□□□□ -0.87
VCP-204ENST00000466100 IGLV3-1P01715 115 aa9.61□□□□□ -0.87
VCP-204ENST00000466100 APOC1P02654 83 aa9.61□□□□□ -0.87
VCP-204ENST00000466100 CCNOP22674 350 aa9.61□□□□□ -0.87
VCP-204ENST00000466100 NR4A1P22736 598 aa9.61□□□□□ -0.87
VCP-204ENST00000466100 RGS6P49758 472 aa9.61□□□□□ -0.87
VCP-204ENST00000466100 GTF2A1P52655 376 aaPredicted RBP9.61□□□□□ -0.87
VCP-204ENST00000466100 BDH1Q02338 343 aa9.61□□□□□ -0.87
VCP-204ENST00000466100 MRPL28Q13084 256 aaKnown RBP9.61□□□□□ -0.87
VCP-204ENST00000466100 CDK5R1Q15078 307 aa9.61□□□□□ -0.87
VCP-204ENST00000466100 SPHARQ15513 63 aa9.61□□□□□ -0.87
VCP-204ENST00000466100 SNAI3Q3KNW1 292 aa9.61□□□□□ -0.87
VCP-204ENST00000466100 WDR38Q5JTN6 314 aa9.61□□□□□ -0.87
VCP-204ENST00000466100 ZNF367Q7RTV3 350 aa9.61□□□□□ -0.87
VCP-204ENST00000466100 KLBQ86Z14 1044 aa9.61□□□□□ -0.87
VCP-204ENST00000466100 OR8B12Q8NGG6 310 aa9.61□□□□□ -0.87
VCP-204ENST00000466100 OR2G2Q8NGZ5 317 aa9.61□□□□□ -0.87
VCP-204ENST00000466100 HAVCR2Q8TDQ0 301 aa9.61□□□□□ -0.87
VCP-204ENST00000466100 PPP1R14AQ96A00 147 aa9.61□□□□□ -0.87
VCP-204ENST00000466100 OPALINQ96PE5 141 aa9.61□□□□□ -0.87
VCP-204ENST00000466100 POFUT1Q9H488 388 aa9.61□□□□□ -0.87
VCP-204ENST00000466100 ESRP2Q9H6T0 727 aaKnown RBP9.61□□□□□ -0.87
VCP-204ENST00000466100 MOB1AQ9H8S9 216 aa9.61□□□□□ -0.87
VCP-204ENST00000466100 BABAM2Q9NXR7 383 aa9.61□□□□□ -0.87
VCP-204ENST00000466100 KCNN3Q9UGI6 736 aa9.61□□□□□ -0.87
VCP-204ENST00000466100 NUFIP1Q9UHK0 495 aaKnown RBP9.61□□□□□ -0.87
VCP-204ENST00000466100 SNX5Q9Y5X3 404 aa9.61□□□□□ -0.87
VCP-204ENST00000466100 ARFGEF3Q5TH69 2177 aa9.61□□□□□ -0.87
VCP-204ENST00000466100 SPG11Q96JI7 2443 aa9.6□□□□□ -0.87
VCP-204ENST00000466100 A0A1W2PPR1 153 aa9.6□□□□□ -0.87
VCP-204ENST00000466100 FAM221AA4D161 298 aa9.6□□□□□ -0.87
VCP-204ENST00000466100 MAGEA13PA6NCF6 341 aa9.6□□□□□ -0.87
VCP-204ENST00000466100 OR4C45A6NMZ5 311 aa9.6□□□□□ -0.87
VCP-204ENST00000466100 LOC110117498-PIK3R3F6TDL0 507 aa9.6□□□□□ -0.87
VCP-204ENST00000466100 OGG1O15527 345 aa9.6□□□□□ -0.87
VCP-204ENST00000466100 GOSR1O95249 250 aa9.6□□□□□ -0.87
VCP-204ENST00000466100 CRYAAP02489 173 aa9.6□□□□□ -0.87
VCP-204ENST00000466100 TTRP02766 147 aa9.6□□□□□ -0.87
VCP-204ENST00000466100 ANXA2P07355 339 aaKnown RBP9.6□□□□□ -0.87
VCP-204ENST00000466100 SLC6A9P48067 706 aa9.6□□□□□ -0.87
VCP-204ENST00000466100 CCR9P51686 369 aa9.6□□□□□ -0.87
VCP-204ENST00000466100 GBX2P52951 348 aaPredicted RBP9.6□□□□□ -0.87
VCP-204ENST00000466100 NR1H2P55055 460 aa9.6□□□□□ -0.87
VCP-204ENST00000466100 UCP2P55851 309 aa9.6□□□□□ -0.87
VCP-204ENST00000466100 ALKBH1Q13686 389 aaKnown RBP9.6□□□□□ -0.87
VCP-204ENST00000466100 MSMPQ1L6U9 139 aa9.6□□□□□ -0.87
VCP-204ENST00000466100 CCDC58Q4VC31 144 aa9.6□□□□□ -0.87
VCP-204ENST00000466100 TMEM255AQ5JRV8 349 aa9.6□□□□□ -0.87
VCP-204ENST00000466100 DMKNQ6E0U4 476 aaPredicted RBP9.6□□□□□ -0.87
VCP-204ENST00000466100 KCTD8Q6ZWB6 473 aa9.6□□□□□ -0.87
VCP-204ENST00000466100 FAM57BQ71RH2 274 aa9.6□□□□□ -0.87
VCP-204ENST00000466100 ELMOD2Q8IZ81 293 aa9.6□□□□□ -0.87
VCP-204ENST00000466100 NUP37Q8NFH4 326 aa9.6□□□□□ -0.87
VCP-204ENST00000466100 KBTBD8Q8NFY9 601 aa9.6□□□□□ -0.87
VCP-204ENST00000466100 MUL1Q969V5 352 aa9.6□□□□□ -0.87
VCP-204ENST00000466100 SPSB4Q96A44 273 aa9.6□□□□□ -0.87
VCP-204ENST00000466100 APOBEC3DQ96AK3 386 aaPredicted RBP9.6□□□□□ -0.87
VCP-204ENST00000466100 COG8Q96MW5 612 aa9.6□□□□□ -0.87
VCP-204ENST00000466100 PBOV1Q9GZY1 135 aa9.6□□□□□ -0.87
VCP-204ENST00000466100 SLC24A3Q9HC58 644 aa9.6□□□□□ -0.87
VCP-204ENST00000466100 ISYNA1Q9NPH2 558 aa9.6□□□□□ -0.87
VCP-204ENST00000466100 TRIM36Q9NQ86 728 aa9.6□□□□□ -0.87
VCP-204ENST00000466100 FRRS1LQ9P0K9 344 aa9.6□□□□□ -0.87
VCP-204ENST00000466100 OR52A1Q9UKL2 312 aa9.6□□□□□ -0.87
VCP-204ENST00000466100 SLC22A13Q9Y226 551 aa9.6□□□□□ -0.87
VCP-204ENST00000466100 STARD10Q9Y365 291 aa9.6□□□□□ -0.87
VCP-204ENST00000466100 POLQO75417 2590 aa9.6□□□□□ -0.87
VCP-204ENST00000466100 BAHCC1Q9P281 2608 aa9.59□□□□□ -0.87
VCP-204ENST00000466100 CSMD2Q7Z408 3487 aa9.59□□□□□ -0.87
VCP-204ENST00000466100 MAP1AP78559 2803 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms