RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 EGLN3Q9H6Z9 239 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 OBP2BQ9NPH6 170 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 B3GAT2Q9NPZ5 323 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 CA10Q9NS85 328 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 IER3IP1Q9Y5U9 82 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 U3KQV3 271 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 TANC2Q9HCD6 1990 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 ARHGAP32A7KAX9 2087 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 FBN1P35555 2871 aaKnown RBP4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.1□□□□□ -1.754e-6■■■■□ 23.7
EXOSC3-204ENST00000465860 HIVEP2P31629 2446 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 IGLV1-36A0A0B4J1U3 117 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 A0A1W2PPL8 197 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 PRSS37A4D1T9 235 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 OR6C68A6NDL8 312 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 VSTM5A8MXK1 200 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 H7C417 338 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 OR10H3O60404 316 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 SLC16A7O60669 478 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 NDUFB2O95178 105 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 NGFP01138 241 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 SERPINA5P05154 406 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 OR8G3PP0DMU2 310 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 HIST1H1CP16403 213 aaKnown RBP4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 FPR3P25089 353 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 RPL4P36578 427 aaKnown RBP4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 SERPINF1P36955 418 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 MPV17P39210 176 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 RPS27P42677 84 aaKnown RBP4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 ALDH3B1P43353 468 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 DAP3P51398 398 aaKnown RBP4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 MRPS34P82930 218 aaKnown RBP4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 SNTB2Q13425 540 aaKnown RBP4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 KRR1Q13601 381 aaKnown RBP4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 RSPO1Q2MKA7 263 aaPredicted RBP4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 RFX4Q33E94 735 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 ALKBH6Q3KRA9 238 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 CLEC12AQ5QGZ9 265 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 SPATA46Q5T0L3 261 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 THEM4Q5T1C6 240 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 FAM27BQ5VT28 67 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 AGAP6Q5VW22 663 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 AWAT2Q6E213 333 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 ZNF774Q6NX45 483 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 C1orf94Q6P1W5 598 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 ZNF620Q6ZNG0 422 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 SSX8Q7RTT4 187 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 SLC16A14Q7RTX9 510 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 CYP4Z1Q86W10 505 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 DHFR2Q86XF0 187 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 GALNT4Q8N4A0 578 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 SLC30A7Q8NEW0 376 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 NUP37Q8NFH4 326 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 CANT1Q8WVQ1 401 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 ASB9Q96DX5 294 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 POM121L2Q96KW2 1035 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 ZNF570Q96NI8 536 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 ERMAPQ96PL5 475 aaPredicted RBP4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 GPX7Q96SL4 187 aaPredicted RBP4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 NMNAT3Q96T66 252 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 DDOQ99489 341 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 DOK1Q99704 481 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 NIPSNAP1Q9BPW8 284 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 ALG12Q9BV10 488 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 NUAK2Q9H093 628 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 C1orf21Q9H246 121 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 SYT4Q9H2B2 425 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 TPK1Q9H3S4 243 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 PLK3Q9H4B4 646 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 DENND2DQ9H6A0 471 aaPredicted RBP4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 SIAEQ9HAT2 523 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 SMURF2Q9HAU4 748 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 POLE4Q9NR33 117 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 FAIMQ9NVQ4 179 aa4.09□□□□□ -1.75
EXOSC3-204ENST00000465860 TCRBV3S1A0A5B6 114 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 C5orf63A6NC05 138 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 CENPBD1B2RD01 187 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 B9A039 149 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 TNFRSF11BO00300 401 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 BHLHE40O14503 412 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 WNT9BO14905 357 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 RER1O15258 196 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 TPD52L2O43399 206 aaKnown RBP4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 PEX14O75381 377 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 GMNNO75496 209 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 DYSFO75923 2080 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 UBL3O95164 117 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 SOX14O95416 240 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 RAB36O95755 333 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 TXNDC12O95881 172 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 TFP02787 698 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 ADRA2AP08913 450 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 CST2P09228 141 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 CLUP10909 449 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 NPR2P20594 1047 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 PRKACGP22612 351 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 COL8A2P25067 703 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 STOMP27105 288 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 IL2RGP31785 369 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 IFNA8P32881 189 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms