RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 ZNF264O43296 627 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 FGF17O60258 216 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 FKTNO75072 461 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 CA11O75493 328 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 APBB3O95704 486 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 CEACAM5P06731 702 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 SPARCP09486 303 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 SEC11BP0C7V7 166 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 NPIPA8P0DM63 369 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 MUC1P15941 1255 aaPredicted RBP6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 ZNF28P17035 718 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 AKR1C4P17516 323 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 PTNP21246 168 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 CHATP28329 748 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 LAP3P28838 519 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 PEBP1P30086 187 aaKnown RBP6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 RBMXP38159 391 aaKnown RBP6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 KIR3DL2P43630 455 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 OR3A2P47893 321 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 RGS19P49795 217 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 ARHGDIBP52566 201 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 DCAF7P61962 342 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 RPL18Q07020 188 aaKnown RBP6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 MFGE8Q08431 387 aaPredicted RBP6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 FABP9Q0Z7S8 132 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 SRSF5Q13243 272 aaKnown RBP6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 NR0B2Q15466 257 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 MEP1BQ16820 701 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 ZNF260Q3ZCT1 412 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 Q3ZCU0 254 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 BEX5Q5H9J7 111 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 HIST2H3PS2Q5TEC6 136 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 GPR157Q5UAW9 335 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 ARMC6Q6NXE6 501 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 FBXO42Q6P3S6 717 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 KLHL24Q6TFL4 600 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 BTNL8Q6UX41 500 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 DBX2Q6ZNG2 339 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 DPY19L4Q7Z388 723 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 ATG4DQ86TL0 474 aaPredicted RBP6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 OR4N5Q8IXE1 308 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 CA13Q8N1Q1 262 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 FAM71E2Q8N5Q1 922 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 CSNK1A1LQ8N752 337 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 AVL9Q8NBF6 648 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 CCDC54Q8NEL0 328 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 OR9K2Q8NGE7 335 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 OR56B1Q8NGI3 324 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 OR5D14Q8NGL3 314 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 OR4A4PQ8NGN8 299 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 OR13D1Q8NGV5 346 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 OR5H2Q8NGV7 314 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 OR52N5Q8NH56 324 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 ZNF563Q8TA94 476 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 KCNG3Q8TAE7 436 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 C2CD4CQ8TF44 421 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 ASB5Q8WWX0 329 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 HIST1H2BAQ96A08 127 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 HHIPL1Q96JK4 782 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 BMFQ96LC9 184 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 VSTM2LQ96N03 204 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 TOX2Q96NM4 488 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 ASB16Q96NS5 453 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 SLC46A1Q96NT5 459 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 LMF1Q96S06 567 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 PFDN5Q99471 154 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 MACROD1Q9BQ69 325 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 SLC5A7Q9GZV3 580 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 WDR13Q9H1Z4 485 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 C8orf33Q9H7E9 229 aaPredicted RBP6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 KCNJ16Q9NPI9 418 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 CYTL1Q9NRR1 136 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 TM7SF3Q9NS93 570 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 CUTCQ9NTM9 273 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 C1orf123Q9NWV4 160 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 GFOD1Q9NXC2 390 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 VSX1Q9NZR4 365 aaPredicted RBP6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 THAP10Q9P2Z0 257 aaPredicted RBP6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 CACFD1Q9UGQ2 172 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 KLK13Q9UKR3 277 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 DTX4Q9Y2E6 619 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 RPH3AQ9Y2J0 694 aaPredicted RBP6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 KLHDC2Q9Y2U9 406 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 MRPS23Q9Y3D9 190 aaKnown RBP6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 FLVCR1Q9Y5Y0 555 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 TCF20Q9UGU0 1960 aaKnown RBP6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 SCN3AQ9NY46 2000 aa6.43□□□□□ -1.38
CLSTN1-204ENST00000464286 TNRC18O15417 2968 aaPredicted RBP6.42□□□□□ -1.38
CLSTN1-204ENST00000464286 LTBP2Q14767 1821 aa6.42□□□□□ -1.38
CLSTN1-204ENST00000464286 A0A0J9YY10 115 aa6.42□□□□□ -1.38
CLSTN1-204ENST00000464286 C7orf77A4D0Y5 90 aa6.42□□□□□ -1.38
CLSTN1-204ENST00000464286 PRSS37A4D1T9 235 aa6.42□□□□□ -1.38
CLSTN1-204ENST00000464286 MEIS3P1A6NDR6 274 aa6.42□□□□□ -1.38
CLSTN1-204ENST00000464286 TMEM235A6NFC5 223 aa6.42□□□□□ -1.38
CLSTN1-204ENST00000464286 ZNF860A6NHJ4 632 aa6.42□□□□□ -1.38
CLSTN1-204ENST00000464286 OR6C76A6NM76 312 aa6.42□□□□□ -1.38
CLSTN1-204ENST00000464286 SEC14L6B5MCN3 397 aa6.42□□□□□ -1.38
CLSTN1-204ENST00000464286 H0YGG7 62 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms