RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 ZNF420Q8TAQ5 688 aaPredicted RBP12.04□□□□□ -0.48
SNRNP40-203ENST00000463988 Q8TCH9 128 aa12.04□□□□□ -0.48
SNRNP40-203ENST00000463988 C22orf15Q8WYQ4 148 aa12.04□□□□□ -0.48
SNRNP40-203ENST00000463988 PLEKHA8Q96JA3 519 aa12.04□□□□□ -0.48
SNRNP40-203ENST00000463988 DDOQ99489 341 aa12.04□□□□□ -0.48
SNRNP40-203ENST00000463988 SSBP3Q9BWW4 388 aaPredicted RBP12.04□□□□□ -0.48
SNRNP40-203ENST00000463988 TRIM15Q9C019 465 aa12.04□□□□□ -0.48
SNRNP40-203ENST00000463988 ZMAT3Q9HA38 289 aaKnown RBP12.04□□□□□ -0.48
SNRNP40-203ENST00000463988 PNRC2Q9NPJ4 139 aaKnown RBP12.04□□□□□ -0.48
SNRNP40-203ENST00000463988 NOP16Q9Y3C1 178 aaKnown RBP12.04□□□□□ -0.48
SNRNP40-203ENST00000463988 CDH10Q9Y6N8 788 aa12.04□□□□□ -0.48
SNRNP40-203ENST00000463988 F5H5P2 479 aa12.03□□□□□ -0.48
SNRNP40-203ENST00000463988 CYB5R3P00387 301 aaPredicted RBP12.03□□□□□ -0.48
SNRNP40-203ENST00000463988 HLA-DQA2P01906 255 aa12.03□□□□□ -0.48
SNRNP40-203ENST00000463988 LCATP04180 440 aa12.03□□□□□ -0.48
SNRNP40-203ENST00000463988 RPS2P15880 293 aaKnown RBP12.03□□□□□ -0.48
SNRNP40-203ENST00000463988 ZNF823P16415 610 aa12.03□□□□□ -0.48
SNRNP40-203ENST00000463988 CD80P33681 288 aa12.03□□□□□ -0.48
SNRNP40-203ENST00000463988 CD200P41217 278 aa12.03□□□□□ -0.48
SNRNP40-203ENST00000463988 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.03□□□□□ -0.48
SNRNP40-203ENST00000463988 ZNF404Q494X3 552 aa12.03□□□□□ -0.48
SNRNP40-203ENST00000463988 LRRN1Q6UXK5 716 aa12.03□□□□□ -0.48
SNRNP40-203ENST00000463988 MOGAT3Q86VF5 341 aa12.03□□□□□ -0.48
SNRNP40-203ENST00000463988 KLBQ86Z14 1044 aa12.03□□□□□ -0.48
SNRNP40-203ENST00000463988 OR52L1Q8NGH7 329 aa12.03□□□□□ -0.48
SNRNP40-203ENST00000463988 OR2T4Q8NH00 348 aa12.03□□□□□ -0.48
SNRNP40-203ENST00000463988 SPTSSAQ969W0 71 aa12.03□□□□□ -0.48
SNRNP40-203ENST00000463988 DACT3Q96B18 629 aaPredicted RBP12.03□□□□□ -0.48
SNRNP40-203ENST00000463988 TMEM246Q9BRR3 403 aa12.03□□□□□ -0.48
SNRNP40-203ENST00000463988 PLA2G12AQ9BZM1 189 aa12.03□□□□□ -0.48
SNRNP40-203ENST00000463988 SLC22A4Q9H015 551 aa12.03□□□□□ -0.48
SNRNP40-203ENST00000463988 WDR76Q9H967 626 aa12.03□□□□□ -0.48
SNRNP40-203ENST00000463988 ARL8BQ9NVJ2 186 aa12.03□□□□□ -0.48
SNRNP40-203ENST00000463988 MRPL22Q9NWU5 206 aaKnown RBP12.03□□□□□ -0.48
SNRNP40-203ENST00000463988 IL20Q9NYY1 176 aa12.03□□□□□ -0.48
SNRNP40-203ENST00000463988 ZNF69Q9UC07 566 aa12.03□□□□□ -0.48
SNRNP40-203ENST00000463988 ARL2BPQ9Y2Y0 163 aa12.03□□□□□ -0.48
SNRNP40-203ENST00000463988 LYVE1Q9Y5Y7 322 aa12.03□□□□□ -0.48
SNRNP40-203ENST00000463988 M0R135 149 aa12.02□□□□□ -0.49
SNRNP40-203ENST00000463988 BHLHE40O14503 412 aa12.02□□□□□ -0.49
SNRNP40-203ENST00000463988 DCTN3O75935 186 aa12.02□□□□□ -0.49
SNRNP40-203ENST00000463988 IRF2P14316 349 aa12.02□□□□□ -0.49
SNRNP40-203ENST00000463988 PRTN3P24158 256 aa12.02□□□□□ -0.49
SNRNP40-203ENST00000463988 PMELP40967 661 aa12.02□□□□□ -0.49
SNRNP40-203ENST00000463988 MNAT1P51948 309 aa12.02□□□□□ -0.49
SNRNP40-203ENST00000463988 MAB21L1Q13394 359 aa12.02□□□□□ -0.49
SNRNP40-203ENST00000463988 SLC35F1Q5T1Q4 408 aa12.02□□□□□ -0.49
SNRNP40-203ENST00000463988 BTNL3Q6UXE8 466 aa12.02□□□□□ -0.49
SNRNP40-203ENST00000463988 C9orf139Q6ZV77 190 aa12.02□□□□□ -0.49
SNRNP40-203ENST00000463988 PGAP1Q75T13 922 aa12.02□□□□□ -0.49
SNRNP40-203ENST00000463988 NLRC3Q7RTR2 1065 aa12.02□□□□□ -0.49
SNRNP40-203ENST00000463988 PIGWQ7Z7B1 504 aa12.02□□□□□ -0.49
SNRNP40-203ENST00000463988 DEFB107AQ8IZN7 70 aa12.02□□□□□ -0.49
SNRNP40-203ENST00000463988 SIGLECL1Q8N7X8 197 aa12.02□□□□□ -0.49
SNRNP40-203ENST00000463988 SGMS2Q8NHU3 365 aa12.02□□□□□ -0.49
SNRNP40-203ENST00000463988 RAB40AQ8WXH6 277 aa12.02□□□□□ -0.49
SNRNP40-203ENST00000463988 SLCO4A1Q96BD0 722 aa12.02□□□□□ -0.49
SNRNP40-203ENST00000463988 NEIL1Q96FI4 390 aaPredicted RBP12.02□□□□□ -0.49
SNRNP40-203ENST00000463988 ZNF799Q96GE5 643 aa12.02□□□□□ -0.49
SNRNP40-203ENST00000463988 MAP6Q96JE9 813 aa12.02□□□□□ -0.49
SNRNP40-203ENST00000463988 FN3KQ9H479 309 aa12.02□□□□□ -0.49
SNRNP40-203ENST00000463988 ACTR3BQ9P1U1 418 aa12.02□□□□□ -0.49
SNRNP40-203ENST00000463988 PPIAL4AQ9Y536 164 aa12.02□□□□□ -0.49
SNRNP40-203ENST00000463988 DOCK11Q5JSL3 2073 aa12.02□□□□□ -0.49
SNRNP40-203ENST00000463988 IGHV2-70DA0A0C4DH43 119 aa12.01□□□□□ -0.49
SNRNP40-203ENST00000463988 HLA-DPB1P04440 258 aa12.01□□□□□ -0.49
SNRNP40-203ENST00000463988 HKR1P10072 659 aa12.01□□□□□ -0.49
SNRNP40-203ENST00000463988 OTX1P32242 354 aaPredicted RBP12.01□□□□□ -0.49
SNRNP40-203ENST00000463988 MAGEA2P43356 314 aa12.01□□□□□ -0.49
SNRNP40-203ENST00000463988 RAD23AP54725 363 aa12.01□□□□□ -0.49
SNRNP40-203ENST00000463988 GNB2P62879 340 aa12.01□□□□□ -0.49
SNRNP40-203ENST00000463988 DBPQ10586 325 aaPredicted RBP12.01□□□□□ -0.49
SNRNP40-203ENST00000463988 FOXL1Q12952 345 aa12.01□□□□□ -0.49
SNRNP40-203ENST00000463988 AWAT1Q58HT5 328 aa12.01□□□□□ -0.49
SNRNP40-203ENST00000463988 CLEC12AQ5QGZ9 265 aa12.01□□□□□ -0.49
SNRNP40-203ENST00000463988 ZNF362Q5T0B9 420 aaPredicted RBP12.01□□□□□ -0.49
SNRNP40-203ENST00000463988 ZNF770Q6IQ21 691 aaPredicted RBP12.01□□□□□ -0.49
SNRNP40-203ENST00000463988 DRAM2Q6UX65 266 aa12.01□□□□□ -0.49
SNRNP40-203ENST00000463988 RASSF6Q6ZTQ3 369 aa12.01□□□□□ -0.49
SNRNP40-203ENST00000463988 MRPL21Q7Z2W9 205 aaKnown RBP12.01□□□□□ -0.49
SNRNP40-203ENST00000463988 NAA40Q86UY6 237 aa12.01□□□□□ -0.49
SNRNP40-203ENST00000463988 PLPP7Q8NBV4 271 aa12.01□□□□□ -0.49
SNRNP40-203ENST00000463988 PROKR2Q8NFJ6 384 aa12.01□□□□□ -0.49
SNRNP40-203ENST00000463988 OR8B3Q8NGG8 313 aa12.01□□□□□ -0.49
SNRNP40-203ENST00000463988 OR10S1Q8NGN2 331 aa12.01□□□□□ -0.49
SNRNP40-203ENST00000463988 OR11L1Q8NGX0 322 aa12.01□□□□□ -0.49
SNRNP40-203ENST00000463988 SPRYD4Q8WW59 207 aaPredicted RBP12.01□□□□□ -0.49
SNRNP40-203ENST00000463988 UPRTQ96BW1 309 aa12.01□□□□□ -0.49
SNRNP40-203ENST00000463988 OR8B2Q96RD0 313 aa12.01□□□□□ -0.49
SNRNP40-203ENST00000463988 BTBD10Q9BSF8 475 aa12.01□□□□□ -0.49
SNRNP40-203ENST00000463988 EGLN3Q9H6Z9 239 aa12.01□□□□□ -0.49
SNRNP40-203ENST00000463988 PKD1L1Q8TDX9 2849 aa12□□□□□ -0.49
SNRNP40-203ENST00000463988 KIR2DS1A0A191URI9 304 aa12□□□□□ -0.49
SNRNP40-203ENST00000463988 CD300LBA8K4G0 201 aa12□□□□□ -0.49
SNRNP40-203ENST00000463988 CLDN34H7C241 214 aa12□□□□□ -0.49
SNRNP40-203ENST00000463988 TNFRSF11BO00300 401 aa12□□□□□ -0.49
SNRNP40-203ENST00000463988 PHYHO14832 338 aa12□□□□□ -0.49
SNRNP40-203ENST00000463988 GMDSO60547 372 aa12□□□□□ -0.49
SNRNP40-203ENST00000463988 ZNF205O95201 554 aa12□□□□□ -0.49
SNRNP40-203ENST00000463988 PTBP3O95758 552 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms