RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 IGHV4-30-4P0DP06 118 aa10.54□□□□□ -0.72
C9orf3-211ENST00000463372 GP9P14770 177 aa10.54□□□□□ -0.72
C9orf3-211ENST00000463372 PHBP35232 272 aa10.54□□□□□ -0.72
C9orf3-211ENST00000463372 CRISP3P54108 245 aa10.54□□□□□ -0.72
C9orf3-211ENST00000463372 ELF3P78545 371 aaPredicted RBP10.54□□□□□ -0.72
C9orf3-211ENST00000463372 FMODQ06828 376 aa10.54□□□□□ -0.72
C9orf3-211ENST00000463372 CD47Q08722 323 aa10.54□□□□□ -0.72
C9orf3-211ENST00000463372 SSX2Q16385 188 aa10.54□□□□□ -0.72
C9orf3-211ENST00000463372 PLBD1Q6P4A8 553 aa10.54□□□□□ -0.72
C9orf3-211ENST00000463372 SYT9Q86SS6 491 aa10.54□□□□□ -0.72
C9orf3-211ENST00000463372 MKXQ8IYA7 352 aa10.54□□□□□ -0.72
C9orf3-211ENST00000463372 OR9Q1Q8NGQ5 310 aa10.54□□□□□ -0.72
C9orf3-211ENST00000463372 MALSU1Q96EH3 234 aa10.54□□□□□ -0.72
C9orf3-211ENST00000463372 P2RX2Q9UBL9 471 aa10.54□□□□□ -0.72
C9orf3-211ENST00000463372 IFT52Q9Y366 437 aa10.54□□□□□ -0.72
C9orf3-211ENST00000463372 DNAJC15Q9Y5T4 150 aa10.54□□□□□ -0.72
C9orf3-211ENST00000463372 PRSS51A0A1B0GVH4 220 aa10.53□□□□□ -0.72
C9orf3-211ENST00000463372 FAM90A8PA6NJQ4 464 aa10.53□□□□□ -0.72
C9orf3-211ENST00000463372 ACOT8O14734 319 aa10.53□□□□□ -0.72
C9orf3-211ENST00000463372 SGCEO43556 437 aa10.53□□□□□ -0.72
C9orf3-211ENST00000463372 C1QCP02747 245 aa10.53□□□□□ -0.72
C9orf3-211ENST00000463372 HIST1H2ABP04908 130 aa10.53□□□□□ -0.72
C9orf3-211ENST00000463372 NR2C1P13056 603 aa10.53□□□□□ -0.72
C9orf3-211ENST00000463372 COX7A1P24310 79 aa10.53□□□□□ -0.72
C9orf3-211ENST00000463372 HTR2AP28223 471 aa10.53□□□□□ -0.72
C9orf3-211ENST00000463372 DYNLT3P51808 116 aa10.53□□□□□ -0.72
C9orf3-211ENST00000463372 SCRN3Q0VDG4 424 aa10.53□□□□□ -0.72
C9orf3-211ENST00000463372 SRSF7Q16629 238 aaKnown RBP eCLIP10.53□□□□□ -0.722e-7■■■■■ 30.9
C9orf3-211ENST00000463372 ZNF826PQ6ZT77 177 aa10.53□□□□□ -0.72
C9orf3-211ENST00000463372 HIST3H2AQ7L7L0 130 aa10.53□□□□□ -0.72
C9orf3-211ENST00000463372 C16orf82Q7Z2V1 217 aa10.53□□□□□ -0.72
C9orf3-211ENST00000463372 LCA5Q86VQ0 697 aa10.53□□□□□ -0.72
C9orf3-211ENST00000463372 FNDC5Q8NAU1 212 aa10.53□□□□□ -0.72
C9orf3-211ENST00000463372 OR4Q3Q8NH05 313 aa10.53□□□□□ -0.72
C9orf3-211ENST00000463372 SLC7A6Q92536 515 aa10.53□□□□□ -0.72
C9orf3-211ENST00000463372 HIST1H2ACQ93077 130 aa10.53□□□□□ -0.72
C9orf3-211ENST00000463372 CDRT15Q96T59 188 aa10.53□□□□□ -0.72
C9orf3-211ENST00000463372 TMEM43Q9BTV4 400 aa10.53□□□□□ -0.72
C9orf3-211ENST00000463372 STX18Q9P2W9 335 aaKnown RBP10.53□□□□□ -0.72
C9orf3-211ENST00000463372 SLC13A4Q9UKG4 626 aa10.53□□□□□ -0.72
C9orf3-211ENST00000463372 IGKV1D-43A0A0B4J1Z2 117 aa10.52□□□□□ -0.73
C9orf3-211ENST00000463372 MYL2P10916 166 aa10.52□□□□□ -0.73
C9orf3-211ENST00000463372 NDUFB7P17568 137 aa10.52□□□□□ -0.73
C9orf3-211ENST00000463372 TGM4P49221 684 aa10.52□□□□□ -0.73
C9orf3-211ENST00000463372 DAP3P51398 398 aaKnown RBP10.52□□□□□ -0.73
C9orf3-211ENST00000463372 PLTPP55058 493 aa10.52□□□□□ -0.73
C9orf3-211ENST00000463372 NCALDP61601 193 aa10.52□□□□□ -0.73
C9orf3-211ENST00000463372 DEFB136Q30KP8 78 aa10.52□□□□□ -0.73
C9orf3-211ENST00000463372 C9orf152Q5JTZ5 239 aa10.52□□□□□ -0.73
C9orf3-211ENST00000463372 ANXA8L1Q5VT79 327 aa10.52□□□□□ -0.73
C9orf3-211ENST00000463372 OR8J2Q8NGG1 315 aa10.52□□□□□ -0.73
C9orf3-211ENST00000463372 ASB10Q8WXI3 467 aa10.52□□□□□ -0.73
C9orf3-211ENST00000463372 ST6GALNAC6Q969X2 333 aa10.52□□□□□ -0.73
C9orf3-211ENST00000463372 APOBEC3DQ96AK3 386 aaPredicted RBP10.52□□□□□ -0.73
C9orf3-211ENST00000463372 NAPGQ99747 312 aaPredicted RBP10.52□□□□□ -0.73
C9orf3-211ENST00000463372 WDR76Q9H967 626 aa10.52□□□□□ -0.73
C9orf3-211ENST00000463372 SLC25A10Q9UBX3 287 aaPredicted RBP10.52□□□□□ -0.73
C9orf3-211ENST00000463372 SIRT4Q9Y6E7 314 aaPredicted RBP10.52□□□□□ -0.73
C9orf3-211ENST00000463372 A0A1W2PPL8 197 aa10.51□□□□□ -0.73
C9orf3-211ENST00000463372 FMO6PO60774 539 aa10.51□□□□□ -0.73
C9orf3-211ENST00000463372 RHBDL1O75783 438 aa10.51□□□□□ -0.73
C9orf3-211ENST00000463372 PTBP3O95758 552 aaKnown RBP10.51□□□□□ -0.73
C9orf3-211ENST00000463372 CH25HO95992 272 aa10.51□□□□□ -0.73
C9orf3-211ENST00000463372 BCHEP06276 602 aa10.51□□□□□ -0.73
C9orf3-211ENST00000463372 GRPP07492 148 aa10.51□□□□□ -0.73
C9orf3-211ENST00000463372 SELLP14151 372 aa10.51□□□□□ -0.73
C9orf3-211ENST00000463372 SPNP16150 400 aa10.51□□□□□ -0.73
C9orf3-211ENST00000463372 MSR1P21757 451 aa10.51□□□□□ -0.73
C9orf3-211ENST00000463372 OR3A4PP47883 348 aa10.51□□□□□ -0.73
C9orf3-211ENST00000463372 CLDN8P56748 225 aa10.51□□□□□ -0.73
C9orf3-211ENST00000463372 ENDOGQ14249 297 aaKnown RBP10.51□□□□□ -0.73
C9orf3-211ENST00000463372 MAPK11Q15759 364 aa10.51□□□□□ -0.73
C9orf3-211ENST00000463372 PCK2Q16822 640 aa10.51□□□□□ -0.73
C9orf3-211ENST00000463372 RPS26P11Q5JNZ5 115 aaPredicted RBP10.51□□□□□ -0.73
C9orf3-211ENST00000463372 RNLSQ5VYX0 342 aa10.51□□□□□ -0.73
C9orf3-211ENST00000463372 KANK2Q63ZY3 851 aa10.51□□□□□ -0.73
C9orf3-211ENST00000463372 LCNL1Q6ZST4 164 aa10.51□□□□□ -0.73
C9orf3-211ENST00000463372 CBLL1Q75N03 491 aa10.51□□□□□ -0.73
C9orf3-211ENST00000463372 DHDDSQ86SQ9 333 aa10.51□□□□□ -0.73
C9orf3-211ENST00000463372 TRIML2Q8N7C3 387 aa10.51□□□□□ -0.73
C9orf3-211ENST00000463372 TWIST2Q8WVJ9 160 aa10.51□□□□□ -0.73
C9orf3-211ENST00000463372 SPRYD4Q8WW59 207 aaPredicted RBP10.51□□□□□ -0.73
C9orf3-211ENST00000463372 PAFAH2Q99487 392 aa10.51□□□□□ -0.73
C9orf3-211ENST00000463372 WACQ9BTA9 647 aa10.51□□□□□ -0.73
C9orf3-211ENST00000463372 ADAT1Q9BUB4 502 aaKnown RBP10.51□□□□□ -0.73
C9orf3-211ENST00000463372 SLC22A4Q9H015 551 aa10.51□□□□□ -0.73
C9orf3-211ENST00000463372 TMEM27Q9HBJ8 222 aa10.51□□□□□ -0.73
C9orf3-211ENST00000463372 SNX12Q9UMY4 172 aa10.51□□□□□ -0.73
C9orf3-211ENST00000463372 NDUFAF1Q9Y375 327 aa10.51□□□□□ -0.73
C9orf3-211ENST00000463372 TBL2Q9Y4P3 447 aaKnown RBP10.51□□□□□ -0.73
C9orf3-211ENST00000463372 PGA5P0DJD9 388 aa10.5□□□□□ -0.73
C9orf3-211ENST00000463372 UMPSP11172 480 aa10.5□□□□□ -0.73
C9orf3-211ENST00000463372 BGNP21810 368 aa10.5□□□□□ -0.73
C9orf3-211ENST00000463372 CA6P23280 308 aa10.5□□□□□ -0.73
C9orf3-211ENST00000463372 PRSS12P56730 875 aa10.5□□□□□ -0.73
C9orf3-211ENST00000463372 WDR4P57081 412 aaKnown RBP10.5□□□□□ -0.73
C9orf3-211ENST00000463372 MRPS25P82663 173 aaKnown RBP10.5□□□□□ -0.73
C9orf3-211ENST00000463372 SEC23BQ15437 767 aa10.5□□□□□ -0.73
C9orf3-211ENST00000463372 HAGHQ16775 308 aa10.5□□□□□ -0.73
C9orf3-211ENST00000463372 C6orf136Q5SQH8 315 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms