RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 SOX7Q9BT81 388 aa15.73■□□□□ 0.11
CDKN1A-206ENST00000462537 SEMA6AQ9H2E6 1030 aa15.73■□□□□ 0.11
CDKN1A-206ENST00000462537 DDX28Q9NUL7 540 aaKnown RBP15.73■□□□□ 0.11
CDKN1A-206ENST00000462537 TVP23BQ9NYZ1 205 aa15.73■□□□□ 0.11
CDKN1A-206ENST00000462537 KCNS2Q9ULS6 477 aa15.73■□□□□ 0.11
CDKN1A-206ENST00000462537 N6AMT1Q9Y5N5 214 aa15.73■□□□□ 0.11
CDKN1A-206ENST00000462537 ZNF878C9JN71 531 aa15.72■□□□□ 0.11
CDKN1A-206ENST00000462537 EBAG9O00559 213 aa15.72■□□□□ 0.11
CDKN1A-206ENST00000462537 TGFAP01135 160 aa15.72■□□□□ 0.11
CDKN1A-206ENST00000462537 CD55P08174 381 aa15.72■□□□□ 0.11
CDKN1A-206ENST00000462537 PRKXP51817 358 aa15.72■□□□□ 0.11
CDKN1A-206ENST00000462537 PRSS12P56730 875 aa15.72■□□□□ 0.11
CDKN1A-206ENST00000462537 ESRRGP62508 458 aa15.72■□□□□ 0.11
CDKN1A-206ENST00000462537 COLCA1Q6ZS62 124 aa15.72■□□□□ 0.11
CDKN1A-206ENST00000462537 CXXC5Q7LFL8 322 aaKnown RBP15.72■□□□□ 0.11
CDKN1A-206ENST00000462537 SHFQ7M4L6 423 aa15.72■□□□□ 0.11
CDKN1A-206ENST00000462537 PARP8Q8N3A8 854 aa15.72■□□□□ 0.11
CDKN1A-206ENST00000462537 OR8G5Q8NG78 346 aa15.72■□□□□ 0.11
CDKN1A-206ENST00000462537 CLDND2Q8NHS1 167 aa15.72■□□□□ 0.11
CDKN1A-206ENST00000462537 TIMD4Q96H15 378 aa15.72■□□□□ 0.11
CDKN1A-206ENST00000462537 TANC2Q9HCD6 1990 aa15.71■□□□□ 0.11
CDKN1A-206ENST00000462537 PRODHO43272 600 aa15.71■□□□□ 0.11
CDKN1A-206ENST00000462537 LMX1BO60663 402 aa15.71■□□□□ 0.11
CDKN1A-206ENST00000462537 SELEP16581 610 aa15.71■□□□□ 0.11
CDKN1A-206ENST00000462537 TNFRSF1AP19438 455 aa15.71■□□□□ 0.11
CDKN1A-206ENST00000462537 HSD11B1P28845 292 aa15.71■□□□□ 0.11
CDKN1A-206ENST00000462537 GK2Q14410 553 aaPredicted RBP15.71■□□□□ 0.11
CDKN1A-206ENST00000462537 PTGES3Q15185 160 aaKnown RBP15.71■□□□□ 0.11
CDKN1A-206ENST00000462537 SPRNQ5BIV9 151 aa15.71■□□□□ 0.11
CDKN1A-206ENST00000462537 DRAM2Q6UX65 266 aa15.71■□□□□ 0.11
CDKN1A-206ENST00000462537 MRPL21Q7Z2W9 205 aaKnown RBP15.71■□□□□ 0.11
CDKN1A-206ENST00000462537 ZNF283Q8N7M2 679 aa15.71■□□□□ 0.11
CDKN1A-206ENST00000462537 BBS1Q8NFJ9 593 aa15.71■□□□□ 0.11
CDKN1A-206ENST00000462537 ST7LQ8TDW4 575 aa15.71■□□□□ 0.11
CDKN1A-206ENST00000462537 PYDC1Q8WXC3 89 aa15.71■□□□□ 0.11
CDKN1A-206ENST00000462537 RAB1CQ92928 201 aa15.71■□□□□ 0.11
CDKN1A-206ENST00000462537 KCNJ15Q99712 375 aa15.71■□□□□ 0.11
CDKN1A-206ENST00000462537 PRRG3Q9BZD7 231 aa15.71■□□□□ 0.11
CDKN1A-206ENST00000462537 IQCF6A8MYZ5 107 aa15.7■□□□□ 0.1
CDKN1A-206ENST00000462537 WNT9BO14905 357 aa15.7■□□□□ 0.1
CDKN1A-206ENST00000462537 MITFO75030 526 aaPredicted RBP15.7■□□□□ 0.1
CDKN1A-206ENST00000462537 SLC2A1P11166 492 aa15.7■□□□□ 0.1
CDKN1A-206ENST00000462537 SLC15A1P46059 708 aa15.7■□□□□ 0.1
CDKN1A-206ENST00000462537 GRB2P62993 217 aaKnown RBP15.7■□□□□ 0.1
CDKN1A-206ENST00000462537 SLC3A1Q07837 685 aa15.7■□□□□ 0.1
CDKN1A-206ENST00000462537 KPNB1Q14974 876 aaKnown RBP15.7■□□□□ 0.1
CDKN1A-206ENST00000462537 SNAI3Q3KNW1 292 aa15.7■□□□□ 0.1
CDKN1A-206ENST00000462537 SLC35D3Q5M8T2 416 aa15.7■□□□□ 0.1
CDKN1A-206ENST00000462537 PGAP1Q75T13 922 aa15.7■□□□□ 0.1
CDKN1A-206ENST00000462537 TIGD4Q8IY51 512 aa15.7■□□□□ 0.1
CDKN1A-206ENST00000462537 LINC01356Q8N9X3 169 aa15.7■□□□□ 0.1
CDKN1A-206ENST00000462537 OR10AD1Q8NGE0 317 aa15.7■□□□□ 0.1
CDKN1A-206ENST00000462537 OR13G1Q8NGZ3 307 aa15.7■□□□□ 0.1
CDKN1A-206ENST00000462537 ITLN1Q8WWA0 313 aa15.7■□□□□ 0.1
CDKN1A-206ENST00000462537 ABHD6Q9BV23 337 aa15.7■□□□□ 0.1
CDKN1A-206ENST00000462537 GABARAPL1Q9H0R8 117 aa15.7■□□□□ 0.1
CDKN1A-206ENST00000462537 MARCH7Q9H992 704 aa15.7■□□□□ 0.1
CDKN1A-206ENST00000462537 IL19Q9UHD0 177 aa15.7■□□□□ 0.1
CDKN1A-206ENST00000462537 WIPI2Q9Y4P8 454 aa15.7■□□□□ 0.1
CDKN1A-206ENST00000462537 SELENOFO60613 162 aa15.69■□□□□ 0.1
CDKN1A-206ENST00000462537 IGFBP5P24593 272 aa15.69■□□□□ 0.1
CDKN1A-206ENST00000462537 OTX1P32242 354 aaPredicted RBP15.69■□□□□ 0.1
CDKN1A-206ENST00000462537 NAA10P41227 235 aaPredicted RBP15.69■□□□□ 0.1
CDKN1A-206ENST00000462537 CX3CR1P49238 355 aa15.69■□□□□ 0.1
CDKN1A-206ENST00000462537 APOFQ13790 326 aa15.69■□□□□ 0.1
CDKN1A-206ENST00000462537 CHRFAM7AQ494W8 412 aa15.69■□□□□ 0.1
CDKN1A-206ENST00000462537 KDM4DQ6B0I6 523 aa15.69■□□□□ 0.1
CDKN1A-206ENST00000462537 PEG10Q86TG7 708 aaKnown RBP15.69■□□□□ 0.1
CDKN1A-206ENST00000462537 OR2AE1Q8NHA4 323 aa15.69■□□□□ 0.1
CDKN1A-206ENST00000462537 THEM6Q8WUY1 208 aa15.69■□□□□ 0.1
CDKN1A-206ENST00000462537 SPRYD4Q8WW59 207 aaPredicted RBP15.69■□□□□ 0.1
CDKN1A-206ENST00000462537 CENPNQ96H22 339 aaPredicted RBP15.69■□□□□ 0.1
CDKN1A-206ENST00000462537 OR2V2Q96R30 315 aa15.69■□□□□ 0.1
CDKN1A-206ENST00000462537 SHARPINQ9H0F6 387 aa15.69■□□□□ 0.1
CDKN1A-206ENST00000462537 ENOPH1Q9UHY7 261 aa15.69■□□□□ 0.1
CDKN1A-206ENST00000462537 OAZ3Q9UMX2 235 aa15.69■□□□□ 0.1
CDKN1A-206ENST00000462537 ISPDA4D126 451 aa15.68■□□□□ 0.1
CDKN1A-206ENST00000462537 SAC3D1A6NKF1 404 aa15.68■□□□□ 0.1
CDKN1A-206ENST00000462537 TBX1O43435 398 aa15.68■□□□□ 0.1
CDKN1A-206ENST00000462537 ANXA2P07355 339 aaKnown RBP15.68■□□□□ 0.1
CDKN1A-206ENST00000462537 LYNP07948 512 aa15.68■□□□□ 0.1
CDKN1A-206ENST00000462537 H2BFMP0C1H6 154 aa15.68■□□□□ 0.1
CDKN1A-206ENST00000462537 SLC2A5P22732 501 aa15.68■□□□□ 0.1
CDKN1A-206ENST00000462537 CDH15P55291 814 aa15.68■□□□□ 0.1
CDKN1A-206ENST00000462537 ACTR3P61158 418 aa15.68■□□□□ 0.1
CDKN1A-206ENST00000462537 GLYATL3Q5SZD4 288 aa15.68■□□□□ 0.1
CDKN1A-206ENST00000462537 LCN1P1Q5VSP4 162 aa15.68■□□□□ 0.1
CDKN1A-206ENST00000462537 ZNF771Q7L3S4 317 aaPredicted RBP15.68■□□□□ 0.1
CDKN1A-206ENST00000462537 RNF133Q8WVZ7 376 aa15.68■□□□□ 0.1
CDKN1A-206ENST00000462537 AMELYQ99218 206 aa15.68■□□□□ 0.1
CDKN1A-206ENST00000462537 SLC30A2Q9BRI3 323 aa15.68■□□□□ 0.1
CDKN1A-206ENST00000462537 BEX2Q9BXY8 128 aa15.68■□□□□ 0.1
CDKN1A-206ENST00000462537 TOR3AQ9H497 397 aa15.68■□□□□ 0.1
CDKN1A-206ENST00000462537 TMEM100Q9NV29 134 aa15.68■□□□□ 0.1
CDKN1A-206ENST00000462537 TMEM160Q9NX00 188 aa15.68■□□□□ 0.1
CDKN1A-206ENST00000462537 DNAJC27Q9NZQ0 273 aa15.68■□□□□ 0.1
CDKN1A-206ENST00000462537 CDC42EP3Q9UKI2 254 aa15.68■□□□□ 0.1
CDKN1A-206ENST00000462537 PPP1R3CQ9UQK1 317 aa15.68■□□□□ 0.1
CDKN1A-206ENST00000462537 GGT3PA6NGU5 568 aa15.67■□□□□ 0.1
CDKN1A-206ENST00000462537 B4DSR2 109 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms