RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 TMIGD2Q96BF3 282 aa12.86□□□□□ -0.35
SKA3-204ENST00000462482 ATF6BQ99941 703 aa12.86□□□□□ -0.35
SKA3-204ENST00000462482 IFT27Q9BW83 186 aa12.86□□□□□ -0.35
SKA3-204ENST00000462482 NSRP1Q9H0G5 558 aaKnown RBP12.86□□□□□ -0.35
SKA3-204ENST00000462482 MMADHCQ9H3L0 296 aaPredicted RBP12.86□□□□□ -0.35
SKA3-204ENST00000462482 FN3KRPQ9HA64 309 aa12.86□□□□□ -0.35
SKA3-204ENST00000462482 ERVK-18Q9QC07 812 aa12.86□□□□□ -0.35
SKA3-204ENST00000462482 IGLV1-36A0A0B4J1U3 117 aa12.85□□□□□ -0.35
SKA3-204ENST00000462482 SASH3O75995 380 aa12.85□□□□□ -0.35
SKA3-204ENST00000462482 ZNF823P16415 610 aa12.85□□□□□ -0.35
SKA3-204ENST00000462482 NPY4RP50391 375 aa12.85□□□□□ -0.35
SKA3-204ENST00000462482 PSME3P61289 254 aa12.85□□□□□ -0.35
SKA3-204ENST00000462482 FGF12P61328 243 aa12.85□□□□□ -0.35
SKA3-204ENST00000462482 GK2Q14410 553 aaPredicted RBP12.85□□□□□ -0.35
SKA3-204ENST00000462482 OR8G1Q15617 311 aa12.85□□□□□ -0.35
SKA3-204ENST00000462482 HSP90B2PQ58FF3 399 aa12.85□□□□□ -0.35
SKA3-204ENST00000462482 WDR25Q64LD2 544 aaPredicted RBP12.85□□□□□ -0.35
SKA3-204ENST00000462482 C17orf107Q6ZR85 190 aa12.85□□□□□ -0.35
SKA3-204ENST00000462482 COLCA1Q6ZS62 124 aa12.85□□□□□ -0.35
SKA3-204ENST00000462482 SLC26A10Q8NG04 563 aa12.85□□□□□ -0.35
SKA3-204ENST00000462482 OR4K13Q8NH42 304 aa12.85□□□□□ -0.35
SKA3-204ENST00000462482 Q8TCH9 128 aa12.85□□□□□ -0.35
SKA3-204ENST00000462482 SPTSSAQ969W0 71 aa12.85□□□□□ -0.35
SKA3-204ENST00000462482 MCUR1Q96AQ8 359 aa12.85□□□□□ -0.35
SKA3-204ENST00000462482 SLCO4A1Q96BD0 722 aa12.85□□□□□ -0.35
SKA3-204ENST00000462482 CMTM5Q96DZ9 223 aa12.85□□□□□ -0.35
SKA3-204ENST00000462482 TECTBQ96PL2 329 aa12.85□□□□□ -0.35
SKA3-204ENST00000462482 NMNAT3Q96T66 252 aa12.85□□□□□ -0.35
SKA3-204ENST00000462482 BEX1Q9HBH7 125 aa12.85□□□□□ -0.35
SKA3-204ENST00000462482 NOX4Q9NPH5 578 aa12.85□□□□□ -0.35
SKA3-204ENST00000462482 TRIM36Q9NQ86 728 aa12.85□□□□□ -0.35
SKA3-204ENST00000462482 RPRD1BQ9NQG5 326 aaKnown RBP12.85□□□□□ -0.35
SKA3-204ENST00000462482 UFSP2Q9NUQ7 469 aa12.85□□□□□ -0.35
SKA3-204ENST00000462482 DCTN6O00399 190 aa12.84□□□□□ -0.35
SKA3-204ENST00000462482 ARPC3O15145 178 aa12.84□□□□□ -0.35
SKA3-204ENST00000462482 HOXA3O43365 443 aaPredicted RBP12.84□□□□□ -0.35
SKA3-204ENST00000462482 KCNAB3O43448 404 aa12.84□□□□□ -0.35
SKA3-204ENST00000462482 OR10H3O60404 316 aa12.84□□□□□ -0.35
SKA3-204ENST00000462482 FAM20BO75063 409 aa12.84□□□□□ -0.35
SKA3-204ENST00000462482 DIRAS1O95057 198 aa12.84□□□□□ -0.35
SKA3-204ENST00000462482 GADD45GO95257 159 aa12.84□□□□□ -0.35
SKA3-204ENST00000462482 KNG1P01042 644 aa12.84□□□□□ -0.35
SKA3-204ENST00000462482 LIPFP07098 398 aa12.84□□□□□ -0.35
SKA3-204ENST00000462482 ACSM4P0C7M7 580 aa12.84□□□□□ -0.35
SKA3-204ENST00000462482 MDKP21741 143 aaPredicted RBP12.84□□□□□ -0.35
SKA3-204ENST00000462482 GGT2P36268 569 aa12.84□□□□□ -0.35
SKA3-204ENST00000462482 CD200P41217 278 aa12.84□□□□□ -0.35
SKA3-204ENST00000462482 SPIBQ01892 262 aa12.84□□□□□ -0.35
SKA3-204ENST00000462482 TRAP1Q12931 704 aaKnown RBP12.84□□□□□ -0.35
SKA3-204ENST00000462482 SEC23BQ15437 767 aa12.84□□□□□ -0.35
SKA3-204ENST00000462482 DEFB112Q30KQ8 113 aa12.84□□□□□ -0.35
SKA3-204ENST00000462482 FAM201AQ5SY85 155 aa12.84□□□□□ -0.35
SKA3-204ENST00000462482 SLC18B1Q6NT16 456 aa12.84□□□□□ -0.35
SKA3-204ENST00000462482 BRD3OSQ6XYD6 125 aa12.84□□□□□ -0.35
SKA3-204ENST00000462482 TSEN54Q7Z6J9 526 aaKnown RBP12.84□□□□□ -0.35
SKA3-204ENST00000462482 LINC00346Q8IVM7 164 aa12.84□□□□□ -0.35
SKA3-204ENST00000462482 OR6V1Q8N148 313 aa12.84□□□□□ -0.35
SKA3-204ENST00000462482 FITM2Q8N6M3 262 aa12.84□□□□□ -0.35
SKA3-204ENST00000462482 OR4F5Q8NH21 305 aa12.84□□□□□ -0.35
SKA3-204ENST00000462482 PCGF1Q9BSM1 259 aa12.84□□□□□ -0.35
SKA3-204ENST00000462482 OR52D1Q9H346 318 aa12.84□□□□□ -0.35
SKA3-204ENST00000462482 SPAG4Q9NPE6 437 aa12.84□□□□□ -0.35
SKA3-204ENST00000462482 DCAF13Q9NV06 445 aaKnown RBP12.84□□□□□ -0.35
SKA3-204ENST00000462482 ADA2Q9NZK5 511 aa12.84□□□□□ -0.35
SKA3-204ENST00000462482 RNF7Q9UBF6 113 aa12.84□□□□□ -0.35
SKA3-204ENST00000462482 KCNG2Q9UJ96 466 aa12.84□□□□□ -0.35
SKA3-204ENST00000462482 TMCC3Q9ULS5 477 aa12.84□□□□□ -0.35
SKA3-204ENST00000462482 A0A1B0GWJ7 208 aa12.83□□□□□ -0.36
SKA3-204ENST00000462482 GGT3PA6NGU5 568 aa12.83□□□□□ -0.36
SKA3-204ENST00000462482 P2RY10O00398 339 aa12.83□□□□□ -0.36
SKA3-204ENST00000462482 NDUFA2O43678 99 aa12.83□□□□□ -0.36
SKA3-204ENST00000462482 IDH3BO43837 385 aa12.83□□□□□ -0.36
SKA3-204ENST00000462482 PMELP40967 661 aa12.83□□□□□ -0.36
SKA3-204ENST00000462482 FXYD6P3P58550 94 aa12.83□□□□□ -0.36
SKA3-204ENST00000462482 MZT1Q08AG7 82 aa12.83□□□□□ -0.36
SKA3-204ENST00000462482 OR8B8Q15620 311 aa12.83□□□□□ -0.36
SKA3-204ENST00000462482 C8orf82Q6P1X6 216 aaPredicted RBP12.83□□□□□ -0.36
SKA3-204ENST00000462482 CFAP77Q6ZQR2 320 aa12.83□□□□□ -0.36
SKA3-204ENST00000462482 BOLLQ8N9W6 283 aaKnown RBP12.83□□□□□ -0.36
SKA3-204ENST00000462482 OR4C15Q8NGM1 316 aa12.83□□□□□ -0.36
SKA3-204ENST00000462482 FAM71F1Q96KD3 344 aaPredicted RBP12.83□□□□□ -0.36
SKA3-204ENST00000462482 C7orf34Q96L11 122 aa12.83□□□□□ -0.36
SKA3-204ENST00000462482 CCDC134Q9H6E4 229 aa12.83□□□□□ -0.36
SKA3-204ENST00000462482 TNFRSF19Q9NS68 423 aa12.83□□□□□ -0.36
SKA3-204ENST00000462482 ABCD2Q9UBJ2 740 aa12.83□□□□□ -0.36
SKA3-204ENST00000462482 MMP24Q9Y5R2 645 aa12.83□□□□□ -0.36
SKA3-204ENST00000462482 DYSFO75923 2080 aa12.82□□□□□ -0.36
SKA3-204ENST00000462482 TRAV38-1A0A0B4J264 116 aa12.82□□□□□ -0.36
SKA3-204ENST00000462482 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.82□□□□□ -0.36
SKA3-204ENST00000462482 MDFIC2A0A1B0GVS7 189 aa12.82□□□□□ -0.36
SKA3-204ENST00000462482 SRRM5B3KS81 715 aa12.82□□□□□ -0.36
SKA3-204ENST00000462482 M0R135 149 aa12.82□□□□□ -0.36
SKA3-204ENST00000462482 LGALS8O00214 317 aa12.82□□□□□ -0.36
SKA3-204ENST00000462482 GMDSO60547 372 aa12.82□□□□□ -0.36
SKA3-204ENST00000462482 TOX4O94842 621 aa12.82□□□□□ -0.36
SKA3-204ENST00000462482 HIST1H1CP16403 213 aaKnown RBP12.82□□□□□ -0.36
SKA3-204ENST00000462482 CA6P23280 308 aa12.82□□□□□ -0.36
SKA3-204ENST00000462482 OMGP23515 440 aa12.82□□□□□ -0.36
SKA3-204ENST00000462482 PRSS12P56730 875 aa12.82□□□□□ -0.36
SKA3-204ENST00000462482 MAB21L1Q13394 359 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms