RNA–Protein interactions for RNA: ENST00000462256.5

DDX39B-215, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 4,027 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-215ENST00000462256 XRCC2O43543 280 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 ARL6IP5O75915 188 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 ATP1B3P54709 279 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 LGALS4P56470 323 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 PPP1CBP62140 327 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 TNFAIP6P98066 277 aaPredicted RBP8.16□□□□□ -1.1
DDX39B-215ENST00000462256 FUT5Q11128 374 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 RBM48Q5RL73 367 aaKnown RBP8.16□□□□□ -1.1
DDX39B-215ENST00000462256 ZNF774Q6NX45 483 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 PAMR1Q6UXH9 720 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 USP51Q70EK9 711 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 SGK3Q96BR1 496 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 DOCK7Q96N67 2140 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 SAP30LQ9HAJ7 183 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 CYSLTR2Q9NS75 346 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 GDF2Q9UK05 429 aaPredicted RBP8.16□□□□□ -1.1
DDX39B-215ENST00000462256 A0A1W2PQ09 198 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 FAM25AB3EWG3 89 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 FAM25CB3EWG5 89 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 FAM25GB3EWG6 89 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 ZNF879B4DU55 563 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 BHLHE40O14503 412 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 BGLAPP02818 100 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 CCL2P13500 99 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 SERPINF1P36955 418 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 DDOSTP39656 456 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 MNDAP41218 407 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 OMPP47874 163 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 RIPPLY1Q0D2K3 151 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 LRRN1Q6UXK5 716 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 PARP8Q8N3A8 854 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 TMEM163Q8TC26 289 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 POC1BQ8TC44 478 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 RAB2BQ8WUD1 216 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 ZDHHC16Q969W1 377 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 RTL8AQ9BWD3 113 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 OR14J1Q9UGF5 321 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 SIGLEC7Q9Y286 467 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 ATG2AQ2TAZ0 1938 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 ARPC3O15145 178 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 SEMA7AO75326 666 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 SNAP29O95721 258 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 ZNF35P13682 527 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 CBR1P16152 277 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 SERPINB10P48595 397 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 CX3CR1P49238 355 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 ZNF81P51508 661 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 TP53I3Q53FA7 332 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 TOR2AQ5JU69 321 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 SLC35D3Q5M8T2 416 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 B3GLCTQ6Y288 498 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 NPEPL1Q8NDH3 523 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 ADPRHL1Q8NDY3 354 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 LRRC20Q8TCA0 184 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 SMAP2Q8WU79 429 aaPredicted RBP8.16□□□□□ -1.1
DDX39B-215ENST00000462256 SNAPC3Q92966 411 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 RNF122Q9H9V4 155 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 ENAMQ9NRM1 1142 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 CMC2Q9NRP2 79 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 TMEM38BQ9NVV0 291 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 ING4Q9UNL4 249 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 PLEKHA6Q9Y2H5 1048 aa8.16□□□□□ -1.1
DDX39B-215ENST00000462256 A0A1W2PPH5 198 aa8.15□□□□□ -1.1
DDX39B-215ENST00000462256 SS18L1O75177 396 aaPredicted RBP8.15□□□□□ -1.1
DDX39B-215ENST00000462256 CELP19835 753 aa8.15□□□□□ -1.1
DDX39B-215ENST00000462256 ART1P52961 327 aa8.15□□□□□ -1.1
DDX39B-215ENST00000462256 MVDP53602 400 aa8.15□□□□□ -1.1
DDX39B-215ENST00000462256 GFRA1P56159 465 aa8.15□□□□□ -1.1
DDX39B-215ENST00000462256 VBP1P61758 197 aa8.15□□□□□ -1.1
DDX39B-215ENST00000462256 GNB2P62879 340 aa8.15□□□□□ -1.1
DDX39B-215ENST00000462256 MRPS34P82930 218 aaKnown RBP8.15□□□□□ -1.1
DDX39B-215ENST00000462256 LINC00518Q8N0U6 118 aa8.15□□□□□ -1.1
DDX39B-215ENST00000462256 CELF2-AS1Q8N7Q2 184 aa8.15□□□□□ -1.1
DDX39B-215ENST00000462256 Q8NA96 180 aa8.15□□□□□ -1.1
DDX39B-215ENST00000462256 LHFPL5Q8TAF8 219 aa8.15□□□□□ -1.1
DDX39B-215ENST00000462256 RAB39BQ96DA2 213 aa8.15□□□□□ -1.1
DDX39B-215ENST00000462256 ZNF416Q9BWM5 594 aa8.15□□□□□ -1.1
DDX39B-215ENST00000462256 SNRNP200O75643 2136 aaKnown RBP8.15□□□□□ -1.1
DDX39B-215ENST00000462256 XIRP2A4UGR9 3374 aa8.15□□□□□ -1.1
DDX39B-215ENST00000462256 TRAPPC2LH3BP13 241 aa8.15□□□□□ -1.1
DDX39B-215ENST00000462256 NXPH2O95156 264 aa8.15□□□□□ -1.1
DDX39B-215ENST00000462256 SPI1P17947 270 aa8.15□□□□□ -1.1
DDX39B-215ENST00000462256 ZNF45Q02386 682 aa8.15□□□□□ -1.1
DDX39B-215ENST00000462256 RSU1Q15404 277 aa8.15□□□□□ -1.1
DDX39B-215ENST00000462256 TSPYL5Q86VY4 417 aaPredicted RBP8.15□□□□□ -1.1
DDX39B-215ENST00000462256 CACNG6Q9BXT2 260 aa8.15□□□□□ -1.1
DDX39B-215ENST00000462256 OPA3Q9H6K4 179 aa8.15□□□□□ -1.1
DDX39B-215ENST00000462256 MAN2C1Q9NTJ4 1040 aa8.15□□□□□ -1.1
DDX39B-215ENST00000462256 NUP50Q9UKX7 468 aa8.15□□□□□ -1.1
DDX39B-215ENST00000462256 REV3LO60673 3130 aa8.15□□□□□ -1.1
DDX39B-215ENST00000462256 DNAH14Q0VDD8 3507 aa8.15□□□□□ -1.11
DDX39B-215ENST00000462256 PDCD5O14737 125 aa8.15□□□□□ -1.11
DDX39B-215ENST00000462256 OR4A8P0C604 315 aa8.15□□□□□ -1.11
DDX39B-215ENST00000462256 ZNF44P15621 663 aa8.15□□□□□ -1.11
DDX39B-215ENST00000462256 NDUFB7P17568 137 aa8.15□□□□□ -1.11
DDX39B-215ENST00000462256 LIPAP38571 399 aa8.15□□□□□ -1.11
DDX39B-215ENST00000462256 OTPQ5XKR4 325 aa8.15□□□□□ -1.11
DDX39B-215ENST00000462256 KLBQ86Z14 1044 aa8.15□□□□□ -1.11
DDX39B-215ENST00000462256 OR1K1Q8NGR3 316 aa8.15□□□□□ -1.11
DDX39B-215ENST00000462256 S100ZQ8WXG8 99 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms