RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 IL5RAQ01344 420 aa9.99□□□□□ -0.81
TRAF3IP1-204ENST00000462122 EGR3Q06889 387 aa9.99□□□□□ -0.81
TRAF3IP1-204ENST00000462122 ZMAT1Q5H9K5 638 aa9.99□□□□□ -0.81
TRAF3IP1-204ENST00000462122 SHEQ5VZ18 495 aa9.99□□□□□ -0.81
TRAF3IP1-204ENST00000462122 ZNF322Q6U7Q0 402 aaPredicted RBP9.99□□□□□ -0.81
TRAF3IP1-204ENST00000462122 PRSS57Q6UWY2 283 aa9.99□□□□□ -0.81
TRAF3IP1-204ENST00000462122 LRRN1Q6UXK5 716 aa9.99□□□□□ -0.81
TRAF3IP1-204ENST00000462122 FBXW12Q6X9E4 464 aa9.99□□□□□ -0.81
TRAF3IP1-204ENST00000462122 KRT77Q7Z794 578 aa9.99□□□□□ -0.81
TRAF3IP1-204ENST00000462122 ZNF679Q8IYX0 411 aa9.99□□□□□ -0.81
TRAF3IP1-204ENST00000462122 ZNF283Q8N7M2 679 aa9.99□□□□□ -0.81
TRAF3IP1-204ENST00000462122 OR2T27Q8NH04 317 aa9.99□□□□□ -0.81
TRAF3IP1-204ENST00000462122 NRG4Q8WWG1 115 aa9.99□□□□□ -0.81
TRAF3IP1-204ENST00000462122 VRK1Q99986 396 aaPredicted RBP9.99□□□□□ -0.81
TRAF3IP1-204ENST00000462122 RAB1BQ9H0U4 201 aa9.99□□□□□ -0.81
TRAF3IP1-204ENST00000462122 OPA3Q9H6K4 179 aa9.99□□□□□ -0.81
TRAF3IP1-204ENST00000462122 CYSLTR2Q9NS75 346 aa9.99□□□□□ -0.81
TRAF3IP1-204ENST00000462122 TAAR3PQ9P1P4 343 aa9.99□□□□□ -0.81
TRAF3IP1-204ENST00000462122 MYEF2Q9P2K5 600 aaKnown RBP9.99□□□□□ -0.81
TRAF3IP1-204ENST00000462122 COPS3Q9UNS2 423 aa9.99□□□□□ -0.81
TRAF3IP1-204ENST00000462122 RRP15Q9Y3B9 282 aaKnown RBP9.99□□□□□ -0.81
TRAF3IP1-204ENST00000462122 PCDHGB1Q9Y5G3 927 aa9.99□□□□□ -0.81
TRAF3IP1-204ENST00000462122 HSPE1-MOB4S4R3N1 261 aa9.99□□□□□ -0.81
TRAF3IP1-204ENST00000462122 MYO9AB2RTY4 2548 aa9.99□□□□□ -0.81
TRAF3IP1-204ENST00000462122 PLSCR5A0PG75 271 aa9.98□□□□□ -0.81
TRAF3IP1-204ENST00000462122 ANXA2P07355 339 aaKnown RBP9.98□□□□□ -0.81
TRAF3IP1-204ENST00000462122 ADRA2AP08913 450 aa9.98□□□□□ -0.81
TRAF3IP1-204ENST00000462122 SELEP16581 610 aa9.98□□□□□ -0.81
TRAF3IP1-204ENST00000462122 KITLGP21583 273 aa9.98□□□□□ -0.81
TRAF3IP1-204ENST00000462122 ALDH3B1P43353 468 aa9.98□□□□□ -0.81
TRAF3IP1-204ENST00000462122 EFNA4P52798 201 aa9.98□□□□□ -0.81
TRAF3IP1-204ENST00000462122 HCCSP53701 268 aa9.98□□□□□ -0.81
TRAF3IP1-204ENST00000462122 PSMA6P60900 246 aaKnown RBP9.98□□□□□ -0.81
TRAF3IP1-204ENST00000462122 ACTC1P68032 377 aa9.98□□□□□ -0.81
TRAF3IP1-204ENST00000462122 ACTA1P68133 377 aa9.98□□□□□ -0.81
TRAF3IP1-204ENST00000462122 ZNF91Q05481 1191 aa9.98□□□□□ -0.81
TRAF3IP1-204ENST00000462122 MAD2L1BPQ15013 274 aaPredicted RBP9.98□□□□□ -0.81
TRAF3IP1-204ENST00000462122 TESK1Q15569 626 aa9.98□□□□□ -0.81
TRAF3IP1-204ENST00000462122 C8orf59Q8N0T1 100 aaPredicted RBP9.98□□□□□ -0.81
TRAF3IP1-204ENST00000462122 OR52H1Q8NGJ2 320 aa9.98□□□□□ -0.81
TRAF3IP1-204ENST00000462122 APH1BQ8WW43 257 aa9.98□□□□□ -0.81
TRAF3IP1-204ENST00000462122 HAVCR1Q96D42 359 aa9.98□□□□□ -0.81
TRAF3IP1-204ENST00000462122 RNFT2Q96EX2 444 aa9.98□□□□□ -0.81
TRAF3IP1-204ENST00000462122 OR8B4Q96RC9 309 aa9.98□□□□□ -0.81
TRAF3IP1-204ENST00000462122 MYCBPQ99417 103 aaPredicted RBP9.98□□□□□ -0.81
TRAF3IP1-204ENST00000462122 POFUT1Q9H488 388 aa9.98□□□□□ -0.81
TRAF3IP1-204ENST00000462122 PTTG3PQ9NZH4 202 aa9.98□□□□□ -0.81
TRAF3IP1-204ENST00000462122 IKZF2Q9UKS7 526 aa9.98□□□□□ -0.81
TRAF3IP1-204ENST00000462122 RPL36Q9Y3U8 105 aaKnown RBP9.98□□□□□ -0.81
TRAF3IP1-204ENST00000462122 LRP12Q9Y561 859 aa9.98□□□□□ -0.81
TRAF3IP1-204ENST00000462122 MAP1AP78559 2803 aaPredicted RBP9.97□□□□□ -0.81
TRAF3IP1-204ENST00000462122 CREBBPQ92793 2442 aa9.97□□□□□ -0.81
TRAF3IP1-204ENST00000462122 USF3Q68DE3 2245 aa9.97□□□□□ -0.81
TRAF3IP1-204ENST00000462122 RTTNQ86VV8 2226 aa9.97□□□□□ -0.81
TRAF3IP1-204ENST00000462122 XRCC2O43543 280 aa9.97□□□□□ -0.81
TRAF3IP1-204ENST00000462122 TIMM8AO60220 97 aaPredicted RBP9.97□□□□□ -0.81
TRAF3IP1-204ENST00000462122 CLIC3O95833 236 aa9.97□□□□□ -0.81
TRAF3IP1-204ENST00000462122 F12P00748 615 aaPredicted RBP9.97□□□□□ -0.81
TRAF3IP1-204ENST00000462122 IGHV4-39P01824 125 aa9.97□□□□□ -0.81
TRAF3IP1-204ENST00000462122 DBTP11182 482 aaKnown RBP9.97□□□□□ -0.81
TRAF3IP1-204ENST00000462122 HSPA13P48723 471 aa9.97□□□□□ -0.81
TRAF3IP1-204ENST00000462122 RIDAP52758 137 aaKnown RBP9.97□□□□□ -0.81
TRAF3IP1-204ENST00000462122 ZNF121P58317 390 aaPredicted RBP9.97□□□□□ -0.81
TRAF3IP1-204ENST00000462122 ISL1P61371 349 aa9.97□□□□□ -0.81
TRAF3IP1-204ENST00000462122 RAB40BQ12829 278 aa9.97□□□□□ -0.81
TRAF3IP1-204ENST00000462122 PSG7Q13046 419 aa9.97□□□□□ -0.81
TRAF3IP1-204ENST00000462122 GK2Q14410 553 aaPredicted RBP9.97□□□□□ -0.81
TRAF3IP1-204ENST00000462122 ZNF829Q3KNS6 432 aaPredicted RBP9.97□□□□□ -0.81
TRAF3IP1-204ENST00000462122 PCGF3Q3KNV8 242 aa9.97□□□□□ -0.81
TRAF3IP1-204ENST00000462122 SNAI3Q3KNW1 292 aa9.97□□□□□ -0.81
TRAF3IP1-204ENST00000462122 Q5PR19 223 aa9.97□□□□□ -0.81
TRAF3IP1-204ENST00000462122 PGAP1Q75T13 922 aa9.97□□□□□ -0.81
TRAF3IP1-204ENST00000462122 MRPL21Q7Z2W9 205 aaKnown RBP9.97□□□□□ -0.81
TRAF3IP1-204ENST00000462122 NAA40Q86UY6 237 aa9.97□□□□□ -0.81
TRAF3IP1-204ENST00000462122 OR10H4Q8NGA5 316 aa9.97□□□□□ -0.81
TRAF3IP1-204ENST00000462122 NEU4Q8WWR8 484 aaPredicted RBP9.97□□□□□ -0.81
TRAF3IP1-204ENST00000462122 TFAP2CQ92754 450 aa9.97□□□□□ -0.81
TRAF3IP1-204ENST00000462122 CMBLQ96DG6 245 aa9.97□□□□□ -0.81
TRAF3IP1-204ENST00000462122 SORCS2Q96PQ0 1159 aa9.97□□□□□ -0.81
TRAF3IP1-204ENST00000462122 OR10A2Q9H208 303 aa9.97□□□□□ -0.81
TRAF3IP1-204ENST00000462122 MOB1AQ9H8S9 216 aa9.97□□□□□ -0.81
TRAF3IP1-204ENST00000462122 MYOZ1Q9NP98 299 aaPredicted RBP9.97□□□□□ -0.81
TRAF3IP1-204ENST00000462122 PURGQ9UJV8 347 aaKnown RBP9.97□□□□□ -0.81
TRAF3IP1-204ENST00000462122 EXOGQ9Y2C4 368 aaKnown RBP9.97□□□□□ -0.81
TRAF3IP1-204ENST00000462122 ZNF469Q96JG9 3925 aaPredicted RBP9.96□□□□□ -0.81
TRAF3IP1-204ENST00000462122 A0A1W2PQL4 384 aaPredicted RBP9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 ACOD1A6NK06 481 aa9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 C17orf100A8MU93 164 aa9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 PRR32B1ATL7 298 aa9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 J3QRE1 110 aa9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 NDUFS7O75251 213 aa9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 WBP4O75554 376 aaKnown RBP9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 APOL3O95236 402 aa9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 FADS2O95864 444 aaKnown RBP9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 KRT8P05787 483 aa9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 SLC2A1P11166 492 aa9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 NAT2P11245 290 aa9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 CFL1P23528 166 aaKnown RBP9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 ZNF81P51508 661 aa9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 MMP15P51511 669 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms